RNA–Protein interactions for RNA: ENST00000621734.4

GTF2I-221, Transcript of general transcription factor IIi, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF2I, Length 4,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-221ENST00000621734 SENP3Q9H4L4 574 aaPredicted RBP19.44■□□□□ 0.7
GTF2I-221ENST00000621734 TRHP20396 242 aaPredicted RBP19.39■□□□□ 0.69
GTF2I-221ENST00000621734 ARID4BQ4LE39 1312 aaPredicted RBP19.38■□□□□ 0.69
GTF2I-221ENST00000621734 FANCD2Q9BXW9 1451 aa19.36■□□□□ 0.69
GTF2I-221ENST00000621734 FHAD1B1AJZ9 1412 aa19.35■□□□□ 0.69
GTF2I-221ENST00000621734 RGL3Q3MIN7 710 aa19.35■□□□□ 0.69
GTF2I-221ENST00000621734 NCAPD3P42695 1498 aa19.31■□□□□ 0.68
GTF2I-221ENST00000621734 DDX10Q13206 875 aaKnown RBP19.31■□□□□ 0.68
GTF2I-221ENST00000621734 SLC24A1O60721 1099 aa19.3■□□□□ 0.68
GTF2I-221ENST00000621734 JPH4Q96JJ6 628 aa19.3■□□□□ 0.68
GTF2I-221ENST00000621734 HIRIP3Q9BW71 556 aaPredicted RBP19.29■□□□□ 0.68
GTF2I-221ENST00000621734 CCNB3Q8WWL7 1395 aa19.29■□□□□ 0.68
GTF2I-221ENST00000621734 CARMIL2Q6F5E8 1435 aa19.28■□□□□ 0.68
GTF2I-221ENST00000621734 KANK4Q5T7N3 995 aaPredicted RBP19.26■□□□□ 0.67
GTF2I-221ENST00000621734 NEFMP07197 916 aa19.24■□□□□ 0.67
GTF2I-221ENST00000621734 PPP1R15AO75807 674 aaPredicted RBP19.22■□□□□ 0.67
GTF2I-221ENST00000621734 RUSC2Q8N2Y8 1516 aa19.19■□□□□ 0.66
GTF2I-221ENST00000621734 MLECQ14165 292 aa19.18■□□□□ 0.66
GTF2I-221ENST00000621734 VPS8Q8N3P4 1428 aa19.18■□□□□ 0.66
GTF2I-221ENST00000621734 RAPGEF2Q9Y4G8 1499 aa19.17■□□□□ 0.66
GTF2I-221ENST00000621734 CLSPNQ9HAW4 1339 aa19.15■□□□□ 0.66
GTF2I-221ENST00000621734 DNAJC5BQ9UF47 199 aa19.14■□□□□ 0.65
GTF2I-221ENST00000621734 SIN3AQ96ST3 1273 aa19.13■□□□□ 0.65
GTF2I-221ENST00000621734 FHOD3Q2V2M9 1422 aa19.12■□□□□ 0.65
GTF2I-221ENST00000621734 FMN1Q68DA7 1419 aa19.12■□□□□ 0.65
GTF2I-221ENST00000621734 CYB5RLQ6IPT4 315 aa19.12■□□□□ 0.65
GTF2I-221ENST00000621734 EIF4G2P78344 907 aaKnown RBP eCLIP19.11■□□□□ 0.655e-6■■□□□ 14.3
GTF2I-221ENST00000621734 RAD54L2Q9Y4B4 1467 aa19.11■□□□□ 0.65
GTF2I-221ENST00000621734 GGT6Q6P531 493 aa19.1■□□□□ 0.65
GTF2I-221ENST00000621734 OSCARQ8IYS5 282 aa19.1■□□□□ 0.65
GTF2I-221ENST00000621734 EFCAB2Q5VUJ9 269 aa19.09■□□□□ 0.65
GTF2I-221ENST00000621734 DAXXQ9UER7 740 aaPredicted RBP19.08■□□□□ 0.65
GTF2I-221ENST00000621734 FGD5Q6ZNL6 1462 aa19.08■□□□□ 0.65
GTF2I-221ENST00000621734 FAM9BQ8IZU0 186 aa19.07■□□□□ 0.64
GTF2I-221ENST00000621734 PLEKHG5O94827 1062 aa19.07■□□□□ 0.64
GTF2I-221ENST00000621734 SALL2Q9Y467 1007 aaPredicted RBP19.07■□□□□ 0.64
GTF2I-221ENST00000621734 IGF1RP08069 1367 aa19.07■□□□□ 0.64
GTF2I-221ENST00000621734 NESP48681 1621 aa19.06■□□□□ 0.64
GTF2I-221ENST00000621734 C14orf37Q86TY3 774 aa19.06■□□□□ 0.64
GTF2I-221ENST00000621734 ACIN1Q9UKV3 1341 aaKnown RBP19.06■□□□□ 0.64
GTF2I-221ENST00000621734 BCL11AQ9H165 835 aa19.05■□□□□ 0.64
GTF2I-221ENST00000621734 TMC1Q8TDI8 760 aa19.03■□□□□ 0.64
GTF2I-221ENST00000621734 CANXP27824 592 aaKnown RBP19.03■□□□□ 0.64
GTF2I-221ENST00000621734 AQRO60306 1485 aaKnown RBP eCLIP19.02■□□□□ 0.649e-7■■■□□ 15.4
GTF2I-221ENST00000621734 GAPVD1Q14C86 1478 aa19.02■□□□□ 0.64
GTF2I-221ENST00000621734 SCAF1Q9H7N4 1312 aaKnown RBP19.02■□□□□ 0.63
GTF2I-221ENST00000621734 CC2D2AQ9P2K1 1620 aa19■□□□□ 0.63
GTF2I-221ENST00000621734 HNRNPUQ00839 825 aaKnown RBP eCLIP18.99■□□□□ 0.63
GTF2I-221ENST00000621734 CARD11Q9BXL7 1154 aa18.99■□□□□ 0.63
GTF2I-221ENST00000621734 ARHGAP35Q9NRY4 1499 aa18.98■□□□□ 0.63
GTF2I-221ENST00000621734 HNRNPMP52272 730 aaKnown RBP eCLIP18.98■□□□□ 0.632e-6■■■■□ 22.5
GTF2I-221ENST00000621734 PTPRGP23470 1445 aa18.98■□□□□ 0.63
GTF2I-221ENST00000621734 CFTRP13569 1480 aa18.96■□□□□ 0.63
GTF2I-221ENST00000621734 FOXD1Q16676 465 aa18.95■□□□□ 0.62
GTF2I-221ENST00000621734 GTF3C3Q9Y5Q9 886 aa18.95■□□□□ 0.62
GTF2I-221ENST00000621734 MRS2Q9HD23 443 aa18.94■□□□□ 0.62
GTF2I-221ENST00000621734 DCAF11Q8TEB1 546 aa18.94■□□□□ 0.62
GTF2I-221ENST00000621734 PKD2Q13563 968 aa18.93■□□□□ 0.62
GTF2I-221ENST00000621734 ZBTB47Q9UFB7 747 aaPredicted RBP18.92■□□□□ 0.62
GTF2I-221ENST00000621734 KIF3BO15066 747 aa18.9■□□□□ 0.62
GTF2I-221ENST00000621734 KANK1Q14678 1352 aa18.9■□□□□ 0.62
GTF2I-221ENST00000621734 BICRAQ9NZM4 1560 aa18.89■□□□□ 0.62
GTF2I-221ENST00000621734 POGKQ9P215 609 aa18.88■□□□□ 0.61
GTF2I-221ENST00000621734 ZBTB7CA1YPR0 619 aa18.88■□□□□ 0.61
GTF2I-221ENST00000621734 WDR43Q15061 677 aaKnown RBP eCLIP18.87■□□□□ 0.61
GTF2I-221ENST00000621734 MIER1Q8N108 512 aa18.86■□□□□ 0.61
GTF2I-221ENST00000621734 SETD5Q9C0A6 1442 aa18.86■□□□□ 0.61
GTF2I-221ENST00000621734 SPAG9O60271 1321 aaKnown RBP18.85■□□□□ 0.61
GTF2I-221ENST00000621734 NUP155O75694 1391 aa18.85■□□□□ 0.61
GTF2I-221ENST00000621734 ANKRD30AQ9BXX3 1397 aa18.82■□□□□ 0.6
GTF2I-221ENST00000621734 CDCA8Q53HL2 280 aa18.82■□□□□ 0.6
GTF2I-221ENST00000621734 MPHOSPH9Q99550 1183 aa18.81■□□□□ 0.6
GTF2I-221ENST00000621734 HMGXB3Q12766 1538 aa18.8■□□□□ 0.6
GTF2I-221ENST00000621734 CCDC18Q5T9S5 1454 aa18.8■□□□□ 0.6
GTF2I-221ENST00000621734 RSPH4AQ5TD94 716 aa18.8■□□□□ 0.6
GTF2I-221ENST00000621734 PPM1GO15355 546 aaPredicted RBP18.79■□□□□ 0.6
GTF2I-221ENST00000621734 LMOD2Q6P5Q4 547 aa18.79■□□□□ 0.6
GTF2I-221ENST00000621734 SAFB2Q14151 953 aaKnown RBP eCLIP18.79■□□□□ 0.6
GTF2I-221ENST00000621734 KNSTRNQ9Y448 316 aa18.79■□□□□ 0.6
GTF2I-221ENST00000621734 SENP3-EIF4A1A0A087X0R7 540 aa18.79■□□□□ 0.6
GTF2I-221ENST00000621734 RAB3GAP2Q9H2M9 1393 aa18.78■□□□□ 0.6
GTF2I-221ENST00000621734 A0A0G2JS52 829 aa18.78■□□□□ 0.6
GTF2I-221ENST00000621734 HDGFP51858 240 aaKnown RBP18.75■□□□□ 0.59
GTF2I-221ENST00000621734 GRIN2BQ13224 1484 aa18.75■□□□□ 0.59
GTF2I-221ENST00000621734 HAP1P54257 671 aaPredicted RBP18.75■□□□□ 0.59
GTF2I-221ENST00000621734 MRC2Q9UBG0 1479 aa18.74■□□□□ 0.59
GTF2I-221ENST00000621734 WASHC2CQ9Y4E1 1318 aa18.74■□□□□ 0.59
GTF2I-221ENST00000621734 STK26Q9P289 416 aa18.74■□□□□ 0.59
GTF2I-221ENST00000621734 TOPBP1Q92547 1522 aa18.72■□□□□ 0.59
GTF2I-221ENST00000621734 FAM69CQ0P6D2 419 aa18.72■□□□□ 0.59
GTF2I-221ENST00000621734 TNNT2P45379 298 aaPredicted RBP18.71■□□□□ 0.59
GTF2I-221ENST00000621734 POLA1P09884 1462 aaPredicted RBP18.7■□□□□ 0.58
GTF2I-221ENST00000621734 TIMELESSQ9UNS1 1208 aa18.7■□□□□ 0.58
GTF2I-221ENST00000621734 FKBP8Q14318 412 aa18.68■□□□□ 0.58
GTF2I-221ENST00000621734 SYNJ1O43426 1573 aa18.68■□□□□ 0.58
GTF2I-221ENST00000621734 SRPK2P78362 688 aaKnown RBP18.67■□□□□ 0.58
GTF2I-221ENST00000621734 ZNF644Q9H582 1327 aaPredicted RBP18.66■□□□□ 0.58
GTF2I-221ENST00000621734 NUTM2DQ5VT03 806 aaPredicted RBP18.65■□□□□ 0.58
GTF2I-221ENST00000621734 TMF1P82094 1093 aa18.65■□□□□ 0.58
GTF2I-221ENST00000621734 IFT140Q96RY7 1462 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms