RNA–Protein interactions for RNA: ENST00000621499.1

GABRB3-214, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

Gene GABRB3, Length 3,860 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-214ENST00000621499 RUSC2Q8N2Y8 1516 aa5.82□□□□□ -1.48
GABRB3-214ENST00000621499 DCAF8L1A6NGE4 600 aa5.81□□□□□ -1.48
GABRB3-214ENST00000621499 POLR3GLQ9BT43 218 aa5.81□□□□□ -1.48
GABRB3-214ENST00000621499 CEP164Q9UPV0 1460 aa5.8□□□□□ -1.48
GABRB3-214ENST00000621499 BAZ1BQ9UIG0 1483 aaKnown RBP5.79□□□□□ -1.48
GABRB3-214ENST00000621499 ARID3CA6NKF2 412 aa5.79□□□□□ -1.48
GABRB3-214ENST00000621499 TOP2AP11388 1531 aaKnown RBP5.79□□□□□ -1.48
GABRB3-214ENST00000621499 ERICH6Q7L0X2 663 aa5.78□□□□□ -1.48
GABRB3-214ENST00000621499 TRIM52Q96A61 297 aa5.78□□□□□ -1.48
GABRB3-214ENST00000621499 HIRIP3Q9BW71 556 aaPredicted RBP5.78□□□□□ -1.48
GABRB3-214ENST00000621499 DDX10Q13206 875 aaKnown RBP5.78□□□□□ -1.48
GABRB3-214ENST00000621499 MYT1Q01538 1121 aa5.77□□□□□ -1.49
GABRB3-214ENST00000621499 SPDYE4A6NLX3 237 aa5.76□□□□□ -1.49
GABRB3-214ENST00000621499 ANP32CO43423 234 aa5.75□□□□□ -1.49
GABRB3-214ENST00000621499 IFNLR1Q8IU57 520 aaPredicted RBP5.75□□□□□ -1.49
GABRB3-214ENST00000621499 SMARCA4P51532 1647 aa5.75□□□□□ -1.49
GABRB3-214ENST00000621499 KANK4Q5T7N3 995 aaPredicted RBP5.75□□□□□ -1.49
GABRB3-214ENST00000621499 POTEDQ86YR6 584 aa5.75□□□□□ -1.49
GABRB3-214ENST00000621499 C1QBPQ07021 282 aaKnown RBP5.74□□□□□ -1.49
GABRB3-214ENST00000621499 VPS8Q8N3P4 1428 aa5.74□□□□□ -1.49
GABRB3-214ENST00000621499 SMARCA2P51531 1590 aa5.73□□□□□ -1.49
GABRB3-214ENST00000621499 RAPGEF2Q9Y4G8 1499 aa5.72□□□□□ -1.49
GABRB3-214ENST00000621499 KIF27Q86VH2 1401 aa5.72□□□□□ -1.49
GABRB3-214ENST00000621499 POLA2Q14181 598 aa5.72□□□□□ -1.49
GABRB3-214ENST00000621499 SIN3AQ96ST3 1273 aa5.72□□□□□ -1.49
GABRB3-214ENST00000621499 ZNF326Q5BKZ1 582 aaKnown RBP5.72□□□□□ -1.49
GABRB3-214ENST00000621499 CHIC2Q9UKJ5 165 aa5.72□□□□□ -1.49
GABRB3-214ENST00000621499 DSG3P32926 999 aa5.71□□□□□ -1.5
GABRB3-214ENST00000621499 PKD2Q13563 968 aa5.71□□□□□ -1.5
GABRB3-214ENST00000621499 TONSLQ96HA7 1378 aa5.71□□□□□ -1.5
GABRB3-214ENST00000621499 SSUH2Q9Y2M2 353 aa5.69□□□□□ -1.5
GABRB3-214ENST00000621499 CCNB3Q8WWL7 1395 aa5.69□□□□□ -1.5
GABRB3-214ENST00000621499 VASPP50552 380 aaPredicted RBP5.69□□□□□ -1.5
GABRB3-214ENST00000621499 FBLN2P98095 1184 aa5.69□□□□□ -1.5
GABRB3-214ENST00000621499 ATAD2BQ9ULI0 1458 aa5.69□□□□□ -1.5
GABRB3-214ENST00000621499 CUX2O14529 1486 aa5.67□□□□□ -1.5
GABRB3-214ENST00000621499 MTUS2Q5JR59 1369 aa5.67□□□□□ -1.5
GABRB3-214ENST00000621499 HNRNPUQ00839 825 aaKnown RBP eCLIP5.67□□□□□ -1.5
GABRB3-214ENST00000621499 RRP7BPQ9NSQ0 103 aa5.67□□□□□ -1.5
GABRB3-214ENST00000621499 ZNF777Q9ULD5 760 aaPredicted RBP5.67□□□□□ -1.5
GABRB3-214ENST00000621499 IRX6P78412 446 aaPredicted RBP5.66□□□□□ -1.5
GABRB3-214ENST00000621499 CLSPNQ9HAW4 1339 aa5.66□□□□□ -1.5
GABRB3-214ENST00000621499 CARMIL1Q5VZK9 1371 aa5.66□□□□□ -1.5
GABRB3-214ENST00000621499 SUPT16HQ9Y5B9 1047 aaKnown RBP5.65□□□□□ -1.5
GABRB3-214ENST00000621499 FAM9BQ8IZU0 186 aa5.65□□□□□ -1.51
GABRB3-214ENST00000621499 DHX57Q6P158 1386 aaKnown RBP5.64□□□□□ -1.51
GABRB3-214ENST00000621499 FBXO3Q9UK99 471 aa5.64□□□□□ -1.51
GABRB3-214ENST00000621499 RAB3GAP2Q9H2M9 1393 aa5.64□□□□□ -1.51
GABRB3-214ENST00000621499 KCNH8Q96L42 1107 aa5.64□□□□□ -1.51
GABRB3-214ENST00000621499 SYNJ1O43426 1573 aa5.64□□□□□ -1.51
GABRB3-214ENST00000621499 MYT1LQ9UL68 1186 aa5.63□□□□□ -1.51
GABRB3-214ENST00000621499 CDK11AQ9UQ88 783 aaPredicted RBP5.63□□□□□ -1.51
GABRB3-214ENST00000621499 SENP3-EIF4A1A0A087X0R7 540 aa5.62□□□□□ -1.51
GABRB3-214ENST00000621499 KIF21BO75037 1637 aa5.62□□□□□ -1.51
GABRB3-214ENST00000621499 SETD5Q9C0A6 1442 aa5.61□□□□□ -1.51
GABRB3-214ENST00000621499 TRHP20396 242 aaPredicted RBP5.61□□□□□ -1.51
GABRB3-214ENST00000621499 UNC13AQ9UPW8 1703 aa5.61□□□□□ -1.51
GABRB3-214ENST00000621499 DAXXQ9UER7 740 aaPredicted RBP5.61□□□□□ -1.51
GABRB3-214ENST00000621499 MRS2Q9HD23 443 aa5.6□□□□□ -1.51
GABRB3-214ENST00000621499 FHAD1B1AJZ9 1412 aa5.59□□□□□ -1.51
GABRB3-214ENST00000621499 FHOD3Q2V2M9 1422 aa5.59□□□□□ -1.51
GABRB3-214ENST00000621499 EIF4G2P78344 907 aaKnown RBP eCLIP5.59□□□□□ -1.52
GABRB3-214ENST00000621499 SALL2Q9Y467 1007 aaPredicted RBP5.59□□□□□ -1.52
GABRB3-214ENST00000621499 ARAP1Q96P48 1450 aa5.58□□□□□ -1.52
GABRB3-214ENST00000621499 TDRD9Q8NDG6 1382 aaKnown RBP5.58□□□□□ -1.52
GABRB3-214ENST00000621499 KDM2AQ9Y2K7 1162 aa5.57□□□□□ -1.52
GABRB3-214ENST00000621499 ARHGAP35Q9NRY4 1499 aa5.57□□□□□ -1.52
GABRB3-214ENST00000621499 CADPSQ9ULU8 1353 aa5.57□□□□□ -1.52
GABRB3-214ENST00000621499 PPP1R15AO75807 674 aaPredicted RBP5.57□□□□□ -1.52
GABRB3-214ENST00000621499 CAPN15O75808 1086 aa5.57□□□□□ -1.52
GABRB3-214ENST00000621499 ZBTB12Q9Y330 459 aaPredicted RBP5.57□□□□□ -1.52
GABRB3-214ENST00000621499 BICRAQ9NZM4 1560 aa5.57□□□□□ -1.52
GABRB3-214ENST00000621499 NPM1P06748 294 aaKnown RBP eCLIP5.56□□□□□ -1.52
GABRB3-214ENST00000621499 IGF1RP08069 1367 aa5.56□□□□□ -1.52
GABRB3-214ENST00000621499 PLCB2Q00722 1185 aa5.56□□□□□ -1.52
GABRB3-214ENST00000621499 ABCB7O75027 752 aa5.56□□□□□ -1.52
GABRB3-214ENST00000621499 EIF4G1Q04637 1599 aaKnown RBP5.55□□□□□ -1.52
GABRB3-214ENST00000621499 TSHZ2Q9NRE2 1034 aa5.55□□□□□ -1.52
GABRB3-214ENST00000621499 HSPA5P11021 654 aaKnown RBP5.54□□□□□ -1.52
GABRB3-214ENST00000621499 OSCARQ8IYS5 282 aa5.54□□□□□ -1.52
GABRB3-214ENST00000621499 PHLDB1Q86UU1 1377 aa5.54□□□□□ -1.52
GABRB3-214ENST00000621499 PRXQ9BXM0 1461 aa5.54□□□□□ -1.52
GABRB3-214ENST00000621499 TIMELESSQ9UNS1 1208 aa5.54□□□□□ -1.52
GABRB3-214ENST00000621499 NPM2Q86SE8 214 aaKnown RBP5.53□□□□□ -1.52
GABRB3-214ENST00000621499 TMC1Q8TDI8 760 aa5.53□□□□□ -1.52
GABRB3-214ENST00000621499 CHMP7Q8WUX9 453 aaPredicted RBP5.53□□□□□ -1.52
GABRB3-214ENST00000621499 FGD5Q6ZNL6 1462 aa5.53□□□□□ -1.52
GABRB3-214ENST00000621499 SPDYE2BA6NHP3 402 aa5.53□□□□□ -1.52
GABRB3-214ENST00000621499 SPDYE6P0CI01 402 aa5.53□□□□□ -1.52
GABRB3-214ENST00000621499 SPDYE2Q495Y8 402 aa5.53□□□□□ -1.52
GABRB3-214ENST00000621499 RTL5Q5HYW3 569 aaPredicted RBP5.53□□□□□ -1.52
GABRB3-214ENST00000621499 TOP2BQ02880 1626 aa5.52□□□□□ -1.53
GABRB3-214ENST00000621499 CCER2I3L3R5 266 aa5.52□□□□□ -1.53
GABRB3-214ENST00000621499 ANP32EQ9BTT0 268 aa5.52□□□□□ -1.53
GABRB3-214ENST00000621499 DNAJC5Q9H3Z4 198 aa5.52□□□□□ -1.53
GABRB3-214ENST00000621499 RAD54L2Q9Y4B4 1467 aa5.52□□□□□ -1.53
GABRB3-214ENST00000621499 CFDP1Q9UEE9 299 aaPredicted RBP5.52□□□□□ -1.53
GABRB3-214ENST00000621499 CUX1P39880 1505 aa5.52□□□□□ -1.53
GABRB3-214ENST00000621499 NCAPD3P42695 1498 aa5.52□□□□□ -1.53
GABRB3-214ENST00000621499 TSPY4P0CV99 314 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms