RNA–Protein interactions for RNA: ENST00000621093.4

POLR2J3-221, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR2J3, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-221ENST00000621093 KIAA0586Q9BVV6 1533 aa17.98■□□□□ 0.47
POLR2J3-221ENST00000621093 SHROOM2Q13796 1616 aa17.98■□□□□ 0.47
POLR2J3-221ENST00000621093 GOLGA3Q08378 1498 aa17.98■□□□□ 0.47
POLR2J3-221ENST00000621093 IQGAP2Q13576 1575 aa17.97■□□□□ 0.47
POLR2J3-221ENST00000621093 DNAJC5Q9H3Z4 198 aa17.95■□□□□ 0.46
POLR2J3-221ENST00000621093 ERCC6L2Q5T890 1561 aa17.94■□□□□ 0.46
POLR2J3-221ENST00000621093 RIMBP3CA6NJZ7 1639 aa17.92■□□□□ 0.46
POLR2J3-221ENST00000621093 RIMBP3BA6NNM3 1639 aa17.92■□□□□ 0.46
POLR2J3-221ENST00000621093 RIMBP3Q9UFD9 1639 aa17.92■□□□□ 0.46
POLR2J3-221ENST00000621093 UBTFP17480 764 aaKnown RBP17.91■□□□□ 0.46
POLR2J3-221ENST00000621093 ARHGEF11O15085 1522 aa17.9■□□□□ 0.46
POLR2J3-221ENST00000621093 JPH4Q96JJ6 628 aa17.9■□□□□ 0.46
POLR2J3-221ENST00000621093 LOC105371045A0A1W2PR82 267 aa17.88■□□□□ 0.45
POLR2J3-221ENST00000621093 PRG4Q92954 1404 aaPredicted RBP17.87■□□□□ 0.45
POLR2J3-221ENST00000621093 UGGT2Q9NYU1 1516 aa17.87■□□□□ 0.45
POLR2J3-221ENST00000621093 RANGAP1P46060 587 aaPredicted RBP17.85■□□□□ 0.45
POLR2J3-221ENST00000621093 DISP1Q96F81 1524 aa17.82■□□□□ 0.44
POLR2J3-221ENST00000621093 KIAA0556O60303 1618 aa17.81■□□□□ 0.44
POLR2J3-221ENST00000621093 SAMD9Q5K651 1589 aa17.79■□□□□ 0.44
POLR2J3-221ENST00000621093 ARAP1Q96P48 1450 aa17.79■□□□□ 0.44
POLR2J3-221ENST00000621093 TNIKQ9UKE5 1360 aa17.79■□□□□ 0.44
POLR2J3-221ENST00000621093 CARMIL2Q6F5E8 1435 aa17.76■□□□□ 0.43
POLR2J3-221ENST00000621093 P3H3Q8IVL6 736 aa17.75■□□□□ 0.43
POLR2J3-221ENST00000621093 TTBK1Q5TCY1 1321 aaPredicted RBP17.73■□□□□ 0.43
POLR2J3-221ENST00000621093 EFCAB5A4FU69 1503 aa17.72■□□□□ 0.43
POLR2J3-221ENST00000621093 ARHGAP35Q9NRY4 1499 aa17.71■□□□□ 0.43
POLR2J3-221ENST00000621093 CYB5RLQ6IPT4 315 aa17.7■□□□□ 0.42
POLR2J3-221ENST00000621093 FHOD3Q2V2M9 1422 aa17.7■□□□□ 0.42
POLR2J3-221ENST00000621093 PTPRGP23470 1445 aa17.67■□□□□ 0.42
POLR2J3-221ENST00000621093 CLIP1P30622 1438 aa17.66■□□□□ 0.42
POLR2J3-221ENST00000621093 CEP162Q5TB80 1403 aa17.66■□□□□ 0.42
POLR2J3-221ENST00000621093 ADCY10Q96PN6 1610 aa17.62■□□□□ 0.41
POLR2J3-221ENST00000621093 PLB1Q6P1J6 1458 aa17.6■□□□□ 0.41
POLR2J3-221ENST00000621093 ABCA8O94911 1581 aa17.6■□□□□ 0.41
POLR2J3-221ENST00000621093 RAPGEF6Q8TEU7 1601 aa17.58■□□□□ 0.4
POLR2J3-221ENST00000621093 UACAQ9BZF9 1416 aa17.56■□□□□ 0.4
POLR2J3-221ENST00000621093 ABCC2Q92887 1545 aa17.56■□□□□ 0.4
POLR2J3-221ENST00000621093 LRRIQ1Q96JM4 1722 aa17.53■□□□□ 0.4
POLR2J3-221ENST00000621093 UHRF1BP1LA0JNW5 1464 aa17.53■□□□□ 0.4
POLR2J3-221ENST00000621093 PCF11O94913 1555 aaKnown RBP17.53■□□□□ 0.4
POLR2J3-221ENST00000621093 ZCCHC11Q5TAX3 1644 aaKnown RBP17.51■□□□□ 0.39
POLR2J3-221ENST00000621093 FMN1Q68DA7 1419 aa17.51■□□□□ 0.39
POLR2J3-221ENST00000621093 ARID3CA6NKF2 412 aa17.49■□□□□ 0.39
POLR2J3-221ENST00000621093 NUP153P49790 1475 aaKnown RBP17.48■□□□□ 0.39
POLR2J3-221ENST00000621093 HECW1Q76N89 1606 aa17.47■□□□□ 0.39
POLR2J3-221ENST00000621093 KDM5BQ9UGL1 1544 aa17.46■□□□□ 0.39
POLR2J3-221ENST00000621093 ATP1B4Q9UN42 357 aaPredicted RBP17.45■□□□□ 0.38
POLR2J3-221ENST00000621093 CASKIN1Q8WXD9 1431 aa17.44■□□□□ 0.38
POLR2J3-221ENST00000621093 ATP10BO94823 1461 aa17.44■□□□□ 0.38
POLR2J3-221ENST00000621093 CDK13Q14004 1512 aaKnown RBP17.43■□□□□ 0.38
POLR2J3-221ENST00000621093 VPS8Q8N3P4 1428 aa17.42■□□□□ 0.38
POLR2J3-221ENST00000621093 NPM1P06748 294 aaKnown RBP eCLIP17.41■□□□□ 0.38
POLR2J3-221ENST00000621093 FYCO1Q9BQS8 1478 aa17.41■□□□□ 0.38
POLR2J3-221ENST00000621093 EPRSP07814 1512 aaKnown RBP17.4■□□□□ 0.38
POLR2J3-221ENST00000621093 MAPKBP1O60336 1514 aa17.38■□□□□ 0.37
POLR2J3-221ENST00000621093 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.36■□□□□ 0.37
POLR2J3-221ENST00000621093 HNRNPUL2Q1KMD3 747 aaKnown RBP17.36■□□□□ 0.37
POLR2J3-221ENST00000621093 ASXL2Q76L83 1435 aa17.36■□□□□ 0.37
POLR2J3-221ENST00000621093 KIF13AQ9H1H9 1805 aa17.35■□□□□ 0.37
POLR2J3-221ENST00000621093 CFAP43Q8NDM7 1665 aa17.33■□□□□ 0.37
POLR2J3-221ENST00000621093 CCDC18Q5T9S5 1454 aa17.32■□□□□ 0.36
POLR2J3-221ENST00000621093 MAGI3Q5TCQ9 1506 aa17.31■□□□□ 0.36
POLR2J3-221ENST00000621093 WDR7Q9Y4E6 1490 aa17.31■□□□□ 0.36
POLR2J3-221ENST00000621093 DIP2BQ9P265 1576 aa17.3■□□□□ 0.36
POLR2J3-221ENST00000621093 TIAM1Q13009 1591 aa17.29■□□□□ 0.36
POLR2J3-221ENST00000621093 KCNH8Q96L42 1107 aa17.27■□□□□ 0.36
POLR2J3-221ENST00000621093 ABCC10Q5T3U5 1492 aa17.26■□□□□ 0.35
POLR2J3-221ENST00000621093 KIF14Q15058 1648 aa17.26■□□□□ 0.35
POLR2J3-221ENST00000621093 TSPOAP1O95153 1857 aa17.25■□□□□ 0.35
POLR2J3-221ENST00000621093 PLEKHD1A6NEE1 506 aa17.25■□□□□ 0.35
POLR2J3-221ENST00000621093 TRHP20396 242 aaPredicted RBP17.24■□□□□ 0.35
POLR2J3-221ENST00000621093 TROQ12816 1431 aaPredicted RBP17.22■□□□□ 0.35
POLR2J3-221ENST00000621093 FAM69CQ0P6D2 419 aa17.22■□□□□ 0.35
POLR2J3-221ENST00000621093 GLI2P10070 1586 aa17.22■□□□□ 0.35
POLR2J3-221ENST00000621093 MAP3K1Q13233 1512 aa17.21■□□□□ 0.35
POLR2J3-221ENST00000621093 MAP3K4Q9Y6R4 1608 aa17.21■□□□□ 0.35
POLR2J3-221ENST00000621093 TTC37Q6PGP7 1564 aa17.2■□□□□ 0.34
POLR2J3-221ENST00000621093 CDK11AQ9UQ88 783 aaPredicted RBP17.2■□□□□ 0.34
POLR2J3-221ENST00000621093 ABCA9Q8IUA7 1624 aa17.2■□□□□ 0.34
POLR2J3-221ENST00000621093 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.2■□□□□ 0.34
POLR2J3-221ENST00000621093 KANK4Q5T7N3 995 aaPredicted RBP17.19■□□□□ 0.34
POLR2J3-221ENST00000621093 EHBP1L1Q8N3D4 1523 aa17.19■□□□□ 0.34
POLR2J3-221ENST00000621093 PPRC1Q5VV67 1664 aaKnown RBP17.18■□□□□ 0.34
POLR2J3-221ENST00000621093 LRRC9Q6ZRR7 1453 aa17.18■□□□□ 0.34
POLR2J3-221ENST00000621093 MTUS2Q5JR59 1369 aa17.17■□□□□ 0.34
POLR2J3-221ENST00000621093 APLP2Q06481 763 aa17.17■□□□□ 0.34
POLR2J3-221ENST00000621093 CDC42BPAQ5VT25 1732 aa17.15■□□□□ 0.34
POLR2J3-221ENST00000621093 SUPT6HQ7KZ85 1726 aaKnown RBP17.15■□□□□ 0.34
POLR2J3-221ENST00000621093 MYO5CQ9NQX4 1742 aa17.15■□□□□ 0.34
POLR2J3-221ENST00000621093 CDC42BPBQ9Y5S2 1711 aa17.13■□□□□ 0.33
POLR2J3-221ENST00000621093 PPARGC1BQ86YN6 1023 aaKnown RBP17.12■□□□□ 0.33
POLR2J3-221ENST00000621093 CD109Q6YHK3 1445 aa17.11■□□□□ 0.33
POLR2J3-221ENST00000621093 NCOA2Q15596 1464 aa17.09■□□□□ 0.33
POLR2J3-221ENST00000621093 PREX2Q70Z35 1606 aa17.09■□□□□ 0.33
POLR2J3-221ENST00000621093 ITSN2Q9NZM3 1697 aa17.06■□□□□ 0.32
POLR2J3-221ENST00000621093 GPATCH8Q9UKJ3 1502 aaKnown RBP17.05■□□□□ 0.32
POLR2J3-221ENST00000621093 PLCH2O75038 1416 aa17.04■□□□□ 0.32
POLR2J3-221ENST00000621093 CCNB3Q8WWL7 1395 aa17.02■□□□□ 0.32
POLR2J3-221ENST00000621093 ARHGAP5Q13017 1502 aa17.02■□□□□ 0.32
POLR2J3-221ENST00000621093 TEX14Q8IWB6 1497 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms