RNA–Protein interactions for RNA: ENST00000621040.4

GTF2I-219, Transcript of general transcription factor IIi, humanhuman

TSL 2

Gene GTF2I, Length 3,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-219ENST00000621040 UGGT2Q9NYU1 1516 aa14.67□□□□□ -0.06
GTF2I-219ENST00000621040 EEA1Q15075 1411 aa14.67□□□□□ -0.06
GTF2I-219ENST00000621040 RAPGEF2Q9Y4G8 1499 aa14.67□□□□□ -0.06
GTF2I-219ENST00000621040 CHMP7Q8WUX9 453 aaPredicted RBP14.66□□□□□ -0.06
GTF2I-219ENST00000621040 CARMIL1Q5VZK9 1371 aa14.66□□□□□ -0.06
GTF2I-219ENST00000621040 SAMD9Q5K651 1589 aa14.6□□□□□ -0.07
GTF2I-219ENST00000621040 DISP1Q96F81 1524 aa14.6□□□□□ -0.07
GTF2I-219ENST00000621040 KIAA0556O60303 1618 aa14.6□□□□□ -0.07
GTF2I-219ENST00000621040 ADCY10Q96PN6 1610 aa14.57□□□□□ -0.08
GTF2I-219ENST00000621040 PRG4Q92954 1404 aaPredicted RBP14.54□□□□□ -0.08
GTF2I-219ENST00000621040 FBLN2P98095 1184 aa14.53□□□□□ -0.08
GTF2I-219ENST00000621040 TRIM41Q8WV44 630 aa14.52□□□□□ -0.08
GTF2I-219ENST00000621040 PELP1Q8IZL8 1130 aaKnown RBP14.52□□□□□ -0.09
GTF2I-219ENST00000621040 KIF13AQ9H1H9 1805 aa14.51□□□□□ -0.09
GTF2I-219ENST00000621040 UHRF1BP1LA0JNW5 1464 aa14.51□□□□□ -0.09
GTF2I-219ENST00000621040 CHIC1Q5VXU3 224 aa14.51□□□□□ -0.09
GTF2I-219ENST00000621040 MAPKBP1O60336 1514 aa14.5□□□□□ -0.09
GTF2I-219ENST00000621040 ABCA8O94911 1581 aa14.47□□□□□ -0.09
GTF2I-219ENST00000621040 JPH4Q96JJ6 628 aa14.46□□□□□ -0.09
GTF2I-219ENST00000621040 EFCAB5A4FU69 1503 aa14.43□□□□□ -0.1
GTF2I-219ENST00000621040 ABCC2Q92887 1545 aa14.43□□□□□ -0.1
GTF2I-219ENST00000621040 GOLGA3Q08378 1498 aa14.43□□□□□ -0.1
GTF2I-219ENST00000621040 TNIKQ9UKE5 1360 aa14.41□□□□□ -0.1
GTF2I-219ENST00000621040 CSRNP3Q8WYN3 585 aa14.41□□□□□ -0.1
GTF2I-219ENST00000621040 ZCCHC11Q5TAX3 1644 aaKnown RBP14.4□□□□□ -0.1
GTF2I-219ENST00000621040 KDM5BQ9UGL1 1544 aa14.39□□□□□ -0.11
GTF2I-219ENST00000621040 CARMIL2Q6F5E8 1435 aa14.39□□□□□ -0.11
GTF2I-219ENST00000621040 DIP2BQ9P265 1576 aa14.39□□□□□ -0.11
GTF2I-219ENST00000621040 GLI2P10070 1586 aa14.38□□□□□ -0.11
GTF2I-219ENST00000621040 PPRC1Q5VV67 1664 aaKnown RBP14.36□□□□□ -0.11
GTF2I-219ENST00000621040 RAPGEF6Q8TEU7 1601 aa14.34□□□□□ -0.11
GTF2I-219ENST00000621040 CYB5RLQ6IPT4 315 aa14.33□□□□□ -0.12
GTF2I-219ENST00000621040 LRRIQ1Q96JM4 1722 aa14.33□□□□□ -0.12
GTF2I-219ENST00000621040 MAP3K4Q9Y6R4 1608 aa14.33□□□□□ -0.12
GTF2I-219ENST00000621040 UACAQ9BZF9 1416 aa14.32□□□□□ -0.12
GTF2I-219ENST00000621040 PTPRGP23470 1445 aa14.31□□□□□ -0.12
GTF2I-219ENST00000621040 ABCC10Q5T3U5 1492 aa14.3□□□□□ -0.12
GTF2I-219ENST00000621040 PLB1Q6P1J6 1458 aa14.26□□□□□ -0.13
GTF2I-219ENST00000621040 ARHGAP35Q9NRY4 1499 aa14.26□□□□□ -0.13
GTF2I-219ENST00000621040 CFAP43Q8NDM7 1665 aa14.25□□□□□ -0.13
GTF2I-219ENST00000621040 NUP153P49790 1475 aaKnown RBP14.22□□□□□ -0.13
GTF2I-219ENST00000621040 MYT1Q01538 1121 aa14.22□□□□□ -0.13
GTF2I-219ENST00000621040 ABCA9Q8IUA7 1624 aa14.21□□□□□ -0.13
GTF2I-219ENST00000621040 EPRSP07814 1512 aaKnown RBP14.2□□□□□ -0.14
GTF2I-219ENST00000621040 HECW1Q76N89 1606 aa14.19□□□□□ -0.14
GTF2I-219ENST00000621040 ASXL2Q76L83 1435 aa14.19□□□□□ -0.14
GTF2I-219ENST00000621040 WDR7Q9Y4E6 1490 aa14.18□□□□□ -0.14
GTF2I-219ENST00000621040 ATP10BO94823 1461 aa14.18□□□□□ -0.14
GTF2I-219ENST00000621040 FHOD3Q2V2M9 1422 aa14.16□□□□□ -0.14
GTF2I-219ENST00000621040 PCF11O94913 1555 aaKnown RBP14.15□□□□□ -0.14
GTF2I-219ENST00000621040 MAGI3Q5TCQ9 1506 aa14.12□□□□□ -0.15
GTF2I-219ENST00000621040 FMN1Q68DA7 1419 aa14.11□□□□□ -0.15
GTF2I-219ENST00000621040 TSPOAP1O95153 1857 aa14.09□□□□□ -0.15
GTF2I-219ENST00000621040 FYCO1Q9BQS8 1478 aa14.09□□□□□ -0.15
GTF2I-219ENST00000621040 CASKIN1Q8WXD9 1431 aa14.08□□□□□ -0.16
GTF2I-219ENST00000621040 ARAP3Q8WWN8 1544 aa14.07□□□□□ -0.16
GTF2I-219ENST00000621040 TTC37Q6PGP7 1564 aa14.06□□□□□ -0.16
GTF2I-219ENST00000621040 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.05□□□□□ -0.16
GTF2I-219ENST00000621040 CFAP74Q9C0B2 1584 aa14.05□□□□□ -0.16
GTF2I-219ENST00000621040 CDK13Q14004 1512 aaKnown RBP14.04□□□□□ -0.16
GTF2I-219ENST00000621040 CCDC18Q5T9S5 1454 aa14.04□□□□□ -0.16
GTF2I-219ENST00000621040 FAM9AQ8IZU1 332 aaPredicted RBP14.03□□□□□ -0.16
GTF2I-219ENST00000621040 MYO5CQ9NQX4 1742 aa14.03□□□□□ -0.16
GTF2I-219ENST00000621040 FRMPD1Q5SYB0 1578 aa14.03□□□□□ -0.16
GTF2I-219ENST00000621040 KDM6BO15054 1643 aa14.02□□□□□ -0.17
GTF2I-219ENST00000621040 KIF14Q15058 1648 aa14.02□□□□□ -0.17
GTF2I-219ENST00000621040 RICTORQ6R327 1708 aa14.01□□□□□ -0.17
GTF2I-219ENST00000621040 CLIP1P30622 1438 aa14.01□□□□□ -0.17
GTF2I-219ENST00000621040 TEX14Q8IWB6 1497 aa14□□□□□ -0.17
GTF2I-219ENST00000621040 PREX2Q70Z35 1606 aa14□□□□□ -0.17
GTF2I-219ENST00000621040 CDC42BPBQ9Y5S2 1711 aa14□□□□□ -0.17
GTF2I-219ENST00000621040 CDC42BPAQ5VT25 1732 aa14□□□□□ -0.17
GTF2I-219ENST00000621040 CEP162Q5TB80 1403 aa14□□□□□ -0.17
GTF2I-219ENST00000621040 MAP3K1Q13233 1512 aa13.98□□□□□ -0.17
GTF2I-219ENST00000621040 NPM1P06748 294 aaKnown RBP eCLIP13.97□□□□□ -0.17
GTF2I-219ENST00000621040 NEO1Q92859 1461 aa13.97□□□□□ -0.17
GTF2I-219ENST00000621040 ZMYM4Q5VZL5 1548 aa13.95□□□□□ -0.18
GTF2I-219ENST00000621040 COL17A1Q9UMD9 1497 aaPredicted RBP13.95□□□□□ -0.18
GTF2I-219ENST00000621040 TROQ12816 1431 aaPredicted RBP13.94□□□□□ -0.18
GTF2I-219ENST00000621040 FAM69CQ0P6D2 419 aa13.93□□□□□ -0.18
GTF2I-219ENST00000621040 PHLDB1Q86UU1 1377 aa13.92□□□□□ -0.18
GTF2I-219ENST00000621040 ITSN2Q9NZM3 1697 aa13.92□□□□□ -0.18
GTF2I-219ENST00000621040 TIAM1Q13009 1591 aa13.92□□□□□ -0.18
GTF2I-219ENST00000621040 UBTFP17480 764 aaKnown RBP13.92□□□□□ -0.18
GTF2I-219ENST00000621040 P3H3Q8IVL6 736 aa13.92□□□□□ -0.18
GTF2I-219ENST00000621040 CD109Q6YHK3 1445 aa13.92□□□□□ -0.18
GTF2I-219ENST00000621040 EHBP1L1Q8N3D4 1523 aa13.9□□□□□ -0.18
GTF2I-219ENST00000621040 TRHP20396 242 aaPredicted RBP13.9□□□□□ -0.18
GTF2I-219ENST00000621040 KDM5CP41229 1560 aa13.89□□□□□ -0.19
GTF2I-219ENST00000621040 HRCP23327 699 aa13.89□□□□□ -0.19
GTF2I-219ENST00000621040 VPS8Q8N3P4 1428 aa13.88□□□□□ -0.19
GTF2I-219ENST00000621040 PLCH2O75038 1416 aa13.87□□□□□ -0.19
GTF2I-219ENST00000621040 SIGLEC1Q9BZZ2 1709 aa13.86□□□□□ -0.19
GTF2I-219ENST00000621040 ABCC1P33527 1531 aa13.86□□□□□ -0.19
GTF2I-219ENST00000621040 EHMT2Q96KQ7 1210 aa13.86□□□□□ -0.19
GTF2I-219ENST00000621040 ARHGEF40Q8TER5 1519 aa13.86□□□□□ -0.19
GTF2I-219ENST00000621040 SUPT6HQ7KZ85 1726 aaKnown RBP13.85□□□□□ -0.19
GTF2I-219ENST00000621040 REREQ9P2R6 1566 aa13.84□□□□□ -0.19
GTF2I-219ENST00000621040 SAMD9LQ8IVG5 1584 aa13.84□□□□□ -0.19
GTF2I-219ENST00000621040 FANCAO15360 1455 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms