RNA–Protein interactions for RNA: ENST00000620693.4

PACSIN1-207, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACSIN1, Length 4,299 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-207ENST00000620693 ARID3CA6NKF2 412 aa17.41■□□□□ 0.38
PACSIN1-207ENST00000620693 NOP58Q9Y2X3 529 aaKnown RBP17.4■□□□□ 0.38
PACSIN1-207ENST00000620693 SIN3AQ96ST3 1273 aa17.39■□□□□ 0.38
PACSIN1-207ENST00000620693 EIF4G1Q04637 1599 aaKnown RBP17.38■□□□□ 0.37
PACSIN1-207ENST00000620693 CLIP1P30622 1438 aa17.38■□□□□ 0.37
PACSIN1-207ENST00000620693 LAS1LQ9Y4W2 734 aaKnown RBP17.38■□□□□ 0.37
PACSIN1-207ENST00000620693 GOLGA3Q08378 1498 aa17.37■□□□□ 0.37
PACSIN1-207ENST00000620693 TNIKQ9UKE5 1360 aa17.36■□□□□ 0.37
PACSIN1-207ENST00000620693 FBLN2P98095 1184 aa17.36■□□□□ 0.37
PACSIN1-207ENST00000620693 DNAJC5BQ9UF47 199 aa17.36■□□□□ 0.37
PACSIN1-207ENST00000620693 ANO8Q9HCE9 1232 aaPredicted RBP17.35■□□□□ 0.37
PACSIN1-207ENST00000620693 SALL2Q9Y467 1007 aaPredicted RBP17.35■□□□□ 0.37
PACSIN1-207ENST00000620693 EEA1Q15075 1411 aa17.33■□□□□ 0.37
PACSIN1-207ENST00000620693 ZNF326Q5BKZ1 582 aaKnown RBP17.33■□□□□ 0.36
PACSIN1-207ENST00000620693 ARXQ96QS3 562 aa17.32■□□□□ 0.36
PACSIN1-207ENST00000620693 MRS2Q9HD23 443 aa17.31■□□□□ 0.36
PACSIN1-207ENST00000620693 TONSLQ96HA7 1378 aa17.29■□□□□ 0.36
PACSIN1-207ENST00000620693 PPP4R2Q9NY27 417 aa17.29■□□□□ 0.36
PACSIN1-207ENST00000620693 CEP164Q9UPV0 1460 aa17.27■□□□□ 0.36
PACSIN1-207ENST00000620693 NCAPD3P42695 1498 aa17.26■□□□□ 0.35
PACSIN1-207ENST00000620693 KIF27Q86VH2 1401 aa17.26■□□□□ 0.35
PACSIN1-207ENST00000620693 NEFMP07197 916 aa17.26■□□□□ 0.35
PACSIN1-207ENST00000620693 CADPSQ9ULU8 1353 aa17.25■□□□□ 0.35
PACSIN1-207ENST00000620693 CUX2O14529 1486 aa17.24■□□□□ 0.35
PACSIN1-207ENST00000620693 RAPGEF2Q9Y4G8 1499 aa17.23■□□□□ 0.35
PACSIN1-207ENST00000620693 MSH5O43196 834 aa17.22■□□□□ 0.35
PACSIN1-207ENST00000620693 SYNJ1O43426 1573 aa17.21■□□□□ 0.35
PACSIN1-207ENST00000620693 TDRD9Q8NDG6 1382 aaKnown RBP17.15■□□□□ 0.34
PACSIN1-207ENST00000620693 KANK4Q5T7N3 995 aaPredicted RBP17.13■□□□□ 0.33
PACSIN1-207ENST00000620693 FANCIQ9NVI1 1328 aa17.13■□□□□ 0.33
PACSIN1-207ENST00000620693 NESP48681 1621 aa17.12■□□□□ 0.33
PACSIN1-207ENST00000620693 CARMIL1Q5VZK9 1371 aa17.12■□□□□ 0.33
PACSIN1-207ENST00000620693 CC2D2AQ9P2K1 1620 aa17.1■□□□□ 0.33
PACSIN1-207ENST00000620693 CCER2I3L3R5 266 aa17.1■□□□□ 0.33
PACSIN1-207ENST00000620693 IL27Q8NEV9 243 aa17.08■□□□□ 0.33
PACSIN1-207ENST00000620693 DHX57Q6P158 1386 aaKnown RBP17.08■□□□□ 0.33
PACSIN1-207ENST00000620693 GLIPR1L2Q4G1C9 344 aa17.07■□□□□ 0.32
PACSIN1-207ENST00000620693 FANCD2Q9BXW9 1451 aa17.06■□□□□ 0.32
PACSIN1-207ENST00000620693 PEG3Q9GZU2 1588 aa17.06■□□□□ 0.32
PACSIN1-207ENST00000620693 CHIC2Q9UKJ5 165 aa17.05■□□□□ 0.32
PACSIN1-207ENST00000620693 CFTRP13569 1480 aa17.05■□□□□ 0.32
PACSIN1-207ENST00000620693 TMC1Q8TDI8 760 aa17.04■□□□□ 0.32
PACSIN1-207ENST00000620693 PAK3O75914 559 aaPredicted RBP17.03■□□□□ 0.32
PACSIN1-207ENST00000620693 RAD54L2Q9Y4B4 1467 aa17.03■□□□□ 0.32
PACSIN1-207ENST00000620693 IPO9Q96P70 1041 aaKnown RBP17.01■□□□□ 0.31
PACSIN1-207ENST00000620693 VPS8Q8N3P4 1428 aa17■□□□□ 0.31
PACSIN1-207ENST00000620693 EIF4G2P78344 907 aaKnown RBP eCLIP17■□□□□ 0.31
PACSIN1-207ENST00000620693 CUX1P39880 1505 aa17■□□□□ 0.31
PACSIN1-207ENST00000620693 HMGXB3Q12766 1538 aa16.99■□□□□ 0.31
PACSIN1-207ENST00000620693 FGD5Q6ZNL6 1462 aa16.99■□□□□ 0.31
PACSIN1-207ENST00000620693 PPM1GO15355 546 aaPredicted RBP16.99■□□□□ 0.31
PACSIN1-207ENST00000620693 IGF1RP08069 1367 aa16.98■□□□□ 0.31
PACSIN1-207ENST00000620693 ERICH6BQ5W0A0 696 aa16.96■□□□□ 0.31
PACSIN1-207ENST00000620693 CCNB3Q8WWL7 1395 aa16.95■□□□□ 0.3
PACSIN1-207ENST00000620693 CHMP7Q8WUX9 453 aaPredicted RBP16.95■□□□□ 0.3
PACSIN1-207ENST00000620693 PDS5BQ9NTI5 1447 aa16.93■□□□□ 0.3
PACSIN1-207ENST00000620693 TIMELESSQ9UNS1 1208 aa16.93■□□□□ 0.3
PACSIN1-207ENST00000620693 RAB3GAP2Q9H2M9 1393 aa16.93■□□□□ 0.3
PACSIN1-207ENST00000620693 ERCC6Q03468 1493 aa16.91■□□□□ 0.3
PACSIN1-207ENST00000620693 NAP1L5Q96NT1 182 aaPredicted RBP16.9■□□□□ 0.3
PACSIN1-207ENST00000620693 RRP7BPQ9NSQ0 103 aa16.9■□□□□ 0.3
PACSIN1-207ENST00000620693 ARID4BQ4LE39 1312 aaPredicted RBP16.9■□□□□ 0.3
PACSIN1-207ENST00000620693 TOP2BQ02880 1626 aa16.9■□□□□ 0.3
PACSIN1-207ENST00000620693 ZNF777Q9ULD5 760 aaPredicted RBP16.9■□□□□ 0.3
PACSIN1-207ENST00000620693 PPP1R15AO75807 674 aaPredicted RBP16.89■□□□□ 0.29
PACSIN1-207ENST00000620693 SLC4A3P48751 1232 aa16.87■□□□□ 0.29
PACSIN1-207ENST00000620693 MTUS2Q5JR59 1369 aa16.86■□□□□ 0.29
PACSIN1-207ENST00000620693 DDRGK1Q96HY6 314 aa16.86■□□□□ 0.29
PACSIN1-207ENST00000620693 HSPA5P11021 654 aaKnown RBP16.85■□□□□ 0.29
PACSIN1-207ENST00000620693 FHOD3Q2V2M9 1422 aa16.85■□□□□ 0.29
PACSIN1-207ENST00000620693 CANXP27824 592 aaKnown RBP16.84■□□□□ 0.29
PACSIN1-207ENST00000620693 RGS3P49796 1198 aa16.84■□□□□ 0.29
PACSIN1-207ENST00000620693 BRPF3Q9ULD4 1205 aa16.83■□□□□ 0.28
PACSIN1-207ENST00000620693 SLC4A1APQ9BWU0 796 aaKnown RBP16.81■□□□□ 0.28
PACSIN1-207ENST00000620693 KIF21BO75037 1637 aa16.8■□□□□ 0.28
PACSIN1-207ENST00000620693 PRXQ9BXM0 1461 aa16.79■□□□□ 0.28
PACSIN1-207ENST00000620693 ARAP1Q96P48 1450 aa16.78■□□□□ 0.28
PACSIN1-207ENST00000620693 SETD5Q9C0A6 1442 aa16.77■□□□□ 0.28
PACSIN1-207ENST00000620693 AQRO60306 1485 aaKnown RBP eCLIP16.77■□□□□ 0.27
PACSIN1-207ENST00000620693 KDM2AQ9Y2K7 1162 aa16.76■□□□□ 0.27
PACSIN1-207ENST00000620693 POLA1P09884 1462 aaPredicted RBP16.75■□□□□ 0.27
PACSIN1-207ENST00000620693 TOPBP1Q92547 1522 aa16.75■□□□□ 0.27
PACSIN1-207ENST00000620693 VSIG10Q8N0Z9 540 aa16.74■□□□□ 0.27
PACSIN1-207ENST00000620693 GSE1Q14687 1217 aa16.73■□□□□ 0.27
PACSIN1-207ENST00000620693 FOXD1Q16676 465 aa16.72■□□□□ 0.27
PACSIN1-207ENST00000620693 PDE4AP27815 886 aa16.71■□□□□ 0.27
PACSIN1-207ENST00000620693 UPF2Q9HAU5 1272 aaKnown RBP16.7■□□□□ 0.26
PACSIN1-207ENST00000620693 GAPVD1Q14C86 1478 aa16.7■□□□□ 0.26
PACSIN1-207ENST00000620693 ARHGAP35Q9NRY4 1499 aa16.69■□□□□ 0.26
PACSIN1-207ENST00000620693 SPRYD3Q8NCJ5 442 aa16.68■□□□□ 0.26
PACSIN1-207ENST00000620693 FHAD1B1AJZ9 1412 aa16.68■□□□□ 0.26
PACSIN1-207ENST00000620693 CCDC184Q52MB2 194 aa16.68■□□□□ 0.26
PACSIN1-207ENST00000620693 NUDCQ9Y266 331 aa16.68■□□□□ 0.26
PACSIN1-207ENST00000620693 TCERG1O14776 1098 aaKnown RBP16.68■□□□□ 0.26
PACSIN1-207ENST00000620693 SLKQ9H2G2 1235 aaPredicted RBP16.67■□□□□ 0.26
PACSIN1-207ENST00000620693 GZF1Q9H116 711 aaPredicted RBP16.67■□□□□ 0.26
PACSIN1-207ENST00000620693 HSP90AA1P07900 732 aaKnown RBP16.66■□□□□ 0.26
PACSIN1-207ENST00000620693 EXOC6Q8TAG9 804 aa16.66■□□□□ 0.26
PACSIN1-207ENST00000620693 USP35Q9P2H5 1018 aa16.65■□□□□ 0.26
PACSIN1-207ENST00000620693 TRIM44Q96DX7 344 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms