RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 GOLGA3Q08378 1498 aa22.41■■□□□ 1.18
NEK3-210ENST00000620675 KIAA0586Q9BVV6 1533 aa22.41■■□□□ 1.18
NEK3-210ENST00000620675 IQGAP2Q13576 1575 aa22.39■■□□□ 1.17
NEK3-210ENST00000620675 SHROOM2Q13796 1616 aa22.38■■□□□ 1.17
NEK3-210ENST00000620675 LOC105371045A0A1W2PR82 267 aa22.38■■□□□ 1.17
NEK3-210ENST00000620675 DNAJC5Q9H3Z4 198 aa22.37■■□□□ 1.17
NEK3-210ENST00000620675 ERCC6L2Q5T890 1561 aa22.37■■□□□ 1.17
NEK3-210ENST00000620675 UBTFP17480 764 aaKnown RBP22.35■■□□□ 1.17
NEK3-210ENST00000620675 JPH4Q96JJ6 628 aa22.34■■□□□ 1.17
NEK3-210ENST00000620675 ARHGEF11O15085 1522 aa22.3■■□□□ 1.16
NEK3-210ENST00000620675 RANGAP1P46060 587 aaPredicted RBP22.3■■□□□ 1.16
NEK3-210ENST00000620675 RIMBP3CA6NJZ7 1639 aa22.3■■□□□ 1.16
NEK3-210ENST00000620675 RIMBP3BA6NNM3 1639 aa22.3■■□□□ 1.16
NEK3-210ENST00000620675 RIMBP3Q9UFD9 1639 aa22.3■■□□□ 1.16
NEK3-210ENST00000620675 PRG4Q92954 1404 aaPredicted RBP22.28■■□□□ 1.16
NEK3-210ENST00000620675 UGGT2Q9NYU1 1516 aa22.25■■□□□ 1.15
NEK3-210ENST00000620675 DISP1Q96F81 1524 aa22.23■■□□□ 1.15
NEK3-210ENST00000620675 TNIKQ9UKE5 1360 aa22.19■■□□□ 1.14
NEK3-210ENST00000620675 KIAA0556O60303 1618 aa22.19■■□□□ 1.14
NEK3-210ENST00000620675 ARAP1Q96P48 1450 aa22.17■■□□□ 1.14
NEK3-210ENST00000620675 P3H3Q8IVL6 736 aa22.17■■□□□ 1.14
NEK3-210ENST00000620675 SAMD9Q5K651 1589 aa22.17■■□□□ 1.14
NEK3-210ENST00000620675 TTBK1Q5TCY1 1321 aaPredicted RBP22.14■■□□□ 1.14
NEK3-210ENST00000620675 CARMIL2Q6F5E8 1435 aa22.12■■□□□ 1.13
NEK3-210ENST00000620675 ARHGAP35Q9NRY4 1499 aa22.1■■□□□ 1.13
NEK3-210ENST00000620675 CYB5RLQ6IPT4 315 aa22.08■■□□□ 1.13
NEK3-210ENST00000620675 FHOD3Q2V2M9 1422 aa22.08■■□□□ 1.13
NEK3-210ENST00000620675 CEP162Q5TB80 1403 aa22.06■■□□□ 1.12
NEK3-210ENST00000620675 EFCAB5A4FU69 1503 aa22.05■■□□□ 1.12
NEK3-210ENST00000620675 CLIP1P30622 1438 aa22.05■■□□□ 1.12
NEK3-210ENST00000620675 PTPRGP23470 1445 aa22.02■■□□□ 1.12
NEK3-210ENST00000620675 PLB1Q6P1J6 1458 aa21.96■■□□□ 1.11
NEK3-210ENST00000620675 ADCY10Q96PN6 1610 aa21.96■■□□□ 1.11
NEK3-210ENST00000620675 ABCA8O94911 1581 aa21.91■■□□□ 1.1
NEK3-210ENST00000620675 UACAQ9BZF9 1416 aa21.89■■□□□ 1.1
NEK3-210ENST00000620675 RAPGEF6Q8TEU7 1601 aa21.87■■□□□ 1.09
NEK3-210ENST00000620675 ABCC2Q92887 1545 aa21.87■■□□□ 1.09
NEK3-210ENST00000620675 ARID3CA6NKF2 412 aa21.85■■□□□ 1.09
NEK3-210ENST00000620675 PCF11O94913 1555 aaKnown RBP21.84■■□□□ 1.09
NEK3-210ENST00000620675 LRRIQ1Q96JM4 1722 aa21.84■■□□□ 1.09
NEK3-210ENST00000620675 FMN1Q68DA7 1419 aa21.83■■□□□ 1.09
NEK3-210ENST00000620675 UHRF1BP1LA0JNW5 1464 aa21.82■■□□□ 1.08
NEK3-210ENST00000620675 NUP153P49790 1475 aaKnown RBP21.81■■□□□ 1.08
NEK3-210ENST00000620675 ZCCHC11Q5TAX3 1644 aaKnown RBP21.79■■□□□ 1.08
NEK3-210ENST00000620675 ATP1B4Q9UN42 357 aaPredicted RBP21.78■■□□□ 1.08
NEK3-210ENST00000620675 KDM5BQ9UGL1 1544 aa21.76■■□□□ 1.07
NEK3-210ENST00000620675 CDK13Q14004 1512 aaKnown RBP21.75■■□□□ 1.07
NEK3-210ENST00000620675 CASKIN1Q8WXD9 1431 aa21.74■■□□□ 1.07
NEK3-210ENST00000620675 ATP10BO94823 1461 aa21.74■■□□□ 1.07
NEK3-210ENST00000620675 HECW1Q76N89 1606 aa21.74■■□□□ 1.07
NEK3-210ENST00000620675 VPS8Q8N3P4 1428 aa21.74■■□□□ 1.07
NEK3-210ENST00000620675 FYCO1Q9BQS8 1478 aa21.71■■□□□ 1.07
NEK3-210ENST00000620675 EPRSP07814 1512 aaKnown RBP21.69■■□□□ 1.06
NEK3-210ENST00000620675 NPM1P06748 294 aaKnown RBP eCLIP21.67■■□□□ 1.06
NEK3-210ENST00000620675 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.65■■□□□ 1.06
NEK3-210ENST00000620675 HNRNPUL2Q1KMD3 747 aaKnown RBP21.65■■□□□ 1.06
NEK3-210ENST00000620675 ASXL2Q76L83 1435 aa21.64■■□□□ 1.06
NEK3-210ENST00000620675 MAPKBP1O60336 1514 aa21.64■■□□□ 1.06
NEK3-210ENST00000620675 MAGI3Q5TCQ9 1506 aa21.6■■□□□ 1.05
NEK3-210ENST00000620675 KIF13AQ9H1H9 1805 aa21.59■■□□□ 1.05
NEK3-210ENST00000620675 CCDC18Q5T9S5 1454 aa21.58■■□□□ 1.04
NEK3-210ENST00000620675 CFAP43Q8NDM7 1665 aa21.57■■□□□ 1.04
NEK3-210ENST00000620675 WDR7Q9Y4E6 1490 aa21.57■■□□□ 1.04
NEK3-210ENST00000620675 TIAM1Q13009 1591 aa21.55■■□□□ 1.04
NEK3-210ENST00000620675 DIP2BQ9P265 1576 aa21.54■■□□□ 1.04
NEK3-210ENST00000620675 KCNH8Q96L42 1107 aa21.54■■□□□ 1.04
NEK3-210ENST00000620675 KIF14Q15058 1648 aa21.51■■□□□ 1.03
NEK3-210ENST00000620675 PLEKHD1A6NEE1 506 aa21.51■■□□□ 1.03
NEK3-210ENST00000620675 ABCC10Q5T3U5 1492 aa21.51■■□□□ 1.03
NEK3-210ENST00000620675 KANK4Q5T7N3 995 aaPredicted RBP21.49■■□□□ 1.03
NEK3-210ENST00000620675 TRHP20396 242 aaPredicted RBP21.48■■□□□ 1.03
NEK3-210ENST00000620675 TSPOAP1O95153 1857 aa21.48■■□□□ 1.03
NEK3-210ENST00000620675 TROQ12816 1431 aaPredicted RBP21.47■■□□□ 1.03
NEK3-210ENST00000620675 FAM69CQ0P6D2 419 aa21.47■■□□□ 1.03
NEK3-210ENST00000620675 CDK11AQ9UQ88 783 aaPredicted RBP21.44■■□□□ 1.02
NEK3-210ENST00000620675 TTC37Q6PGP7 1564 aa21.44■■□□□ 1.02
NEK3-210ENST00000620675 MAP3K1Q13233 1512 aa21.44■■□□□ 1.02
NEK3-210ENST00000620675 LRRC9Q6ZRR7 1453 aa21.43■■□□□ 1.02
NEK3-210ENST00000620675 MTUS2Q5JR59 1369 aa21.43■■□□□ 1.02
NEK3-210ENST00000620675 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.43■■□□□ 1.02
NEK3-210ENST00000620675 PPARGC1BQ86YN6 1023 aaKnown RBP21.43■■□□□ 1.02
NEK3-210ENST00000620675 GLI2P10070 1586 aa21.42■■□□□ 1.02
NEK3-210ENST00000620675 ABCA9Q8IUA7 1624 aa21.41■■□□□ 1.02
NEK3-210ENST00000620675 EHBP1L1Q8N3D4 1523 aa21.41■■□□□ 1.02
NEK3-210ENST00000620675 MAP3K4Q9Y6R4 1608 aa21.41■■□□□ 1.02
NEK3-210ENST00000620675 APLP2Q06481 763 aa21.4■■□□□ 1.02
NEK3-210ENST00000620675 PPRC1Q5VV67 1664 aaKnown RBP21.39■■□□□ 1.01
NEK3-210ENST00000620675 SUPT6HQ7KZ85 1726 aaKnown RBP21.35■■□□□ 1.01
NEK3-210ENST00000620675 CDC42BPAQ5VT25 1732 aa21.35■■□□□ 1.01
NEK3-210ENST00000620675 CD109Q6YHK3 1445 aa21.33■■□□□ 1.01
NEK3-210ENST00000620675 MYO5CQ9NQX4 1742 aa21.33■■□□□ 1
NEK3-210ENST00000620675 CDC42BPBQ9Y5S2 1711 aa21.32■■□□□ 1
NEK3-210ENST00000620675 NCOA2Q15596 1464 aa21.32■■□□□ 1
NEK3-210ENST00000620675 PREX2Q70Z35 1606 aa21.27■■□□□ 1
NEK3-210ENST00000620675 GPATCH8Q9UKJ3 1502 aaKnown RBP21.26■□□□□ 0.99
NEK3-210ENST00000620675 PLCH2O75038 1416 aa21.24■□□□□ 0.99
NEK3-210ENST00000620675 PHLDB1Q86UU1 1377 aa21.24■□□□□ 0.99
NEK3-210ENST00000620675 CCNB3Q8WWL7 1395 aa21.23■□□□□ 0.99
NEK3-210ENST00000620675 ARHGAP5Q13017 1502 aa21.21■□□□□ 0.99
NEK3-210ENST00000620675 ITSN2Q9NZM3 1697 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms