RNA–Protein interactions for RNA: ENST00000620529.1

PCGF3-213, Transcript of polycomb group ring finger 3, humanhuman

BASIC

Gene PCGF3, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-213ENST00000620529 VPS8Q8N3P4 1428 aa26.03■■□□□ 1.76
PCGF3-213ENST00000620529 ARHGAP35Q9NRY4 1499 aa26.03■■□□□ 1.76
PCGF3-213ENST00000620529 ARAP1Q96P48 1450 aa26.01■■□□□ 1.75
PCGF3-213ENST00000620529 CHMP7Q8WUX9 453 aaPredicted RBP26■■□□□ 1.75
PCGF3-213ENST00000620529 EFCAB5A4FU69 1503 aa25.98■■□□□ 1.75
PCGF3-213ENST00000620529 IQGAP2Q13576 1575 aa25.96■■□□□ 1.75
PCGF3-213ENST00000620529 FBLN2P98095 1184 aa25.95■■□□□ 1.74
PCGF3-213ENST00000620529 KIAA0586Q9BVV6 1533 aa25.89■■□□□ 1.74
PCGF3-213ENST00000620529 SAMD9Q5K651 1589 aa25.87■■□□□ 1.73
PCGF3-213ENST00000620529 CEP170Q5SW79 1584 aa25.87■■□□□ 1.73
PCGF3-213ENST00000620529 CHD1O14646 1710 aa25.85■■□□□ 1.73
PCGF3-213ENST00000620529 P3H3Q8IVL6 736 aa25.83■■□□□ 1.73
PCGF3-213ENST00000620529 NUP160Q12769 1436 aa25.83■■□□□ 1.73
PCGF3-213ENST00000620529 APLP2Q06481 763 aa25.83■■□□□ 1.72
PCGF3-213ENST00000620529 FHOD3Q2V2M9 1422 aa25.82■■□□□ 1.72
PCGF3-213ENST00000620529 UGGT2Q9NYU1 1516 aa25.8■■□□□ 1.72
PCGF3-213ENST00000620529 PPARGC1BQ86YN6 1023 aaKnown RBP25.78■■□□□ 1.72
PCGF3-213ENST00000620529 FMN1Q68DA7 1419 aa25.74■■□□□ 1.71
PCGF3-213ENST00000620529 TRIM26Q12899 539 aaPredicted RBP25.74■■□□□ 1.71
PCGF3-213ENST00000620529 PCF11O94913 1555 aaKnown RBP25.7■■□□□ 1.7
PCGF3-213ENST00000620529 KIAA0556O60303 1618 aa25.69■■□□□ 1.7
PCGF3-213ENST00000620529 PCGF6Q9BYE7 350 aa25.67■■□□□ 1.7
PCGF3-213ENST00000620529 FYCO1Q9BQS8 1478 aa25.66■■□□□ 1.7
PCGF3-213ENST00000620529 DISP1Q96F81 1524 aa25.65■■□□□ 1.7
PCGF3-213ENST00000620529 TTBK1Q5TCY1 1321 aaPredicted RBP25.64■■□□□ 1.7
PCGF3-213ENST00000620529 CASKIN1Q8WXD9 1431 aa25.64■■□□□ 1.69
PCGF3-213ENST00000620529 JPH4Q96JJ6 628 aa25.62■■□□□ 1.69
PCGF3-213ENST00000620529 CARMIL2Q6F5E8 1435 aa25.61■■□□□ 1.69
PCGF3-213ENST00000620529 ATP1B4Q9UN42 357 aaPredicted RBP25.6■■□□□ 1.69
PCGF3-213ENST00000620529 MAP3K1Q13233 1512 aa25.6■■□□□ 1.69
PCGF3-213ENST00000620529 TIAM1Q13009 1591 aa25.59■■□□□ 1.69
PCGF3-213ENST00000620529 CFAP43Q8NDM7 1665 aa25.57■■□□□ 1.68
PCGF3-213ENST00000620529 HECW1Q76N89 1606 aa25.52■■□□□ 1.68
PCGF3-213ENST00000620529 SHROOM2Q13796 1616 aa25.51■■□□□ 1.67
PCGF3-213ENST00000620529 CLASP1Q7Z460 1538 aa25.5■■□□□ 1.67
PCGF3-213ENST00000620529 PRG4Q92954 1404 aaPredicted RBP25.49■■□□□ 1.67
PCGF3-213ENST00000620529 KANK4Q5T7N3 995 aaPredicted RBP25.49■■□□□ 1.67
PCGF3-213ENST00000620529 LRRIQ1Q96JM4 1722 aa25.47■■□□□ 1.67
PCGF3-213ENST00000620529 CCDC18Q5T9S5 1454 aa25.44■■□□□ 1.66
PCGF3-213ENST00000620529 LRRC9Q6ZRR7 1453 aa25.44■■□□□ 1.66
PCGF3-213ENST00000620529 RAPGEF6Q8TEU7 1601 aa25.44■■□□□ 1.66
PCGF3-213ENST00000620529 EPRSP07814 1512 aaKnown RBP25.36■■□□□ 1.65
PCGF3-213ENST00000620529 MTUS2Q5JR59 1369 aa25.33■■□□□ 1.65
PCGF3-213ENST00000620529 PLB1Q6P1J6 1458 aa25.33■■□□□ 1.65
PCGF3-213ENST00000620529 PTPRGP23470 1445 aa25.32■■□□□ 1.64
PCGF3-213ENST00000620529 NUP153P49790 1475 aaKnown RBP25.31■■□□□ 1.64
PCGF3-213ENST00000620529 OSCARQ8IYS5 282 aa25.31■■□□□ 1.64
PCGF3-213ENST00000620529 CDK13Q14004 1512 aaKnown RBP25.31■■□□□ 1.64
PCGF3-213ENST00000620529 ERCC6L2Q5T890 1561 aa25.3■■□□□ 1.64
PCGF3-213ENST00000620529 EHBP1L1Q8N3D4 1523 aa25.3■■□□□ 1.64
PCGF3-213ENST00000620529 ABCA8O94911 1581 aa25.29■■□□□ 1.64
PCGF3-213ENST00000620529 SUPT6HQ7KZ85 1726 aaKnown RBP25.26■■□□□ 1.63
PCGF3-213ENST00000620529 ARID3CA6NKF2 412 aa25.25■■□□□ 1.63
PCGF3-213ENST00000620529 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.22■■□□□ 1.63
PCGF3-213ENST00000620529 HNRNPUL2Q1KMD3 747 aaKnown RBP25.22■■□□□ 1.63
PCGF3-213ENST00000620529 MAGI3Q5TCQ9 1506 aa25.21■■□□□ 1.63
PCGF3-213ENST00000620529 RRBP1Q9P2E9 1410 aaKnown RBP25.2■■□□□ 1.62
PCGF3-213ENST00000620529 CDK11AQ9UQ88 783 aaPredicted RBP25.2■■□□□ 1.62
PCGF3-213ENST00000620529 UACAQ9BZF9 1416 aa25.18■■□□□ 1.62
PCGF3-213ENST00000620529 PHLDB1Q86UU1 1377 aa25.18■■□□□ 1.62
PCGF3-213ENST00000620529 CCNB3Q8WWL7 1395 aa25.15■■□□□ 1.62
PCGF3-213ENST00000620529 NCOA2Q15596 1464 aa25.15■■□□□ 1.62
PCGF3-213ENST00000620529 ABCC2Q92887 1545 aa25.12■■□□□ 1.61
PCGF3-213ENST00000620529 ATP10BO94823 1461 aa25.1■■□□□ 1.61
PCGF3-213ENST00000620529 ARHGEF11O15085 1522 aa25.09■■□□□ 1.61
PCGF3-213ENST00000620529 TROQ12816 1431 aaPredicted RBP25.08■■□□□ 1.61
PCGF3-213ENST00000620529 MYOM3Q5VTT5 1437 aa25.05■■□□□ 1.6
PCGF3-213ENST00000620529 UHRF1BP1LA0JNW5 1464 aa25.05■■□□□ 1.6
PCGF3-213ENST00000620529 ADCY10Q96PN6 1610 aa25.04■■□□□ 1.6
PCGF3-213ENST00000620529 PLEKHD1A6NEE1 506 aa25.04■■□□□ 1.6
PCGF3-213ENST00000620529 FGD6Q6ZV73 1430 aa25.04■■□□□ 1.6
PCGF3-213ENST00000620529 FAM50AQ14320 339 aaKnown RBP25■■□□□ 1.59
PCGF3-213ENST00000620529 KIF14Q15058 1648 aa24.99■■□□□ 1.59
PCGF3-213ENST00000620529 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.98■■□□□ 1.59
PCGF3-213ENST00000620529 ZCCHC11Q5TAX3 1644 aaKnown RBP24.97■■□□□ 1.59
PCGF3-213ENST00000620529 PTPN23Q9H3S7 1636 aa24.95■■□□□ 1.59
PCGF3-213ENST00000620529 ITSN2Q9NZM3 1697 aa24.95■■□□□ 1.58
PCGF3-213ENST00000620529 KDM5BQ9UGL1 1544 aa24.94■■□□□ 1.58
PCGF3-213ENST00000620529 MIA2Q96PC5 1412 aa24.93■■□□□ 1.58
PCGF3-213ENST00000620529 ITGAEP38570 1179 aa24.93■■□□□ 1.58
PCGF3-213ENST00000620529 TCOF1Q13428 1488 aaKnown RBP24.88■■□□□ 1.57
PCGF3-213ENST00000620529 ABCC10Q5T3U5 1492 aa24.84■■□□□ 1.57
PCGF3-213ENST00000620529 CDC42BPAQ5VT25 1732 aa24.84■■□□□ 1.57
PCGF3-213ENST00000620529 GPATCH8Q9UKJ3 1502 aaKnown RBP24.83■■□□□ 1.57
PCGF3-213ENST00000620529 HRCP23327 699 aa24.81■■□□□ 1.56
PCGF3-213ENST00000620529 RIMBP3CA6NJZ7 1639 aa24.8■■□□□ 1.56
PCGF3-213ENST00000620529 RIMBP3BA6NNM3 1639 aa24.8■■□□□ 1.56
PCGF3-213ENST00000620529 RIMBP3Q9UFD9 1639 aa24.8■■□□□ 1.56
PCGF3-213ENST00000620529 CFDP1Q9UEE9 299 aaPredicted RBP24.79■■□□□ 1.56
PCGF3-213ENST00000620529 NPM1P06748 294 aaKnown RBP eCLIP24.77■■□□□ 1.56
PCGF3-213ENST00000620529 CCER1Q8TC90 406 aaPredicted RBP24.76■■□□□ 1.55
PCGF3-213ENST00000620529 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.75■■□□□ 1.55
PCGF3-213ENST00000620529 PREX2Q70Z35 1606 aa24.75■■□□□ 1.55
PCGF3-213ENST00000620529 TTC37Q6PGP7 1564 aa24.74■■□□□ 1.55
PCGF3-213ENST00000620529 CAMSAP2Q08AD1 1489 aa24.74■■□□□ 1.55
PCGF3-213ENST00000620529 KCNH8Q96L42 1107 aa24.74■■□□□ 1.55
PCGF3-213ENST00000620529 MYO5CQ9NQX4 1742 aa24.74■■□□□ 1.55
PCGF3-213ENST00000620529 WDR7Q9Y4E6 1490 aa24.73■■□□□ 1.55
PCGF3-213ENST00000620529 CDC42BPBQ9Y5S2 1711 aa24.71■■□□□ 1.55
PCGF3-213ENST00000620529 ZNF777Q9ULD5 760 aaPredicted RBP24.7■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms