RNA–Protein interactions for RNA: ENST00000619747.1

LAPTM4B-204, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-204ENST00000619747 GAPVD1Q14C86 1478 aa28.95■■■□□ 2.22
LAPTM4B-204ENST00000619747 FHOD3Q2V2M9 1422 aa28.92■■■□□ 2.22
LAPTM4B-204ENST00000619747 GTF3C3Q9Y5Q9 886 aa28.91■■■□□ 2.22
LAPTM4B-204ENST00000619747 WDR97A6NE52 1622 aa28.85■■■□□ 2.21
LAPTM4B-204ENST00000619747 AQRO60306 1485 aaKnown RBP eCLIP28.85■■■□□ 2.21
LAPTM4B-204ENST00000619747 CUL7Q14999 1698 aa28.84■■■□□ 2.21
LAPTM4B-204ENST00000619747 ABCA5Q8WWZ7 1642 aa28.81■■■□□ 2.2
LAPTM4B-204ENST00000619747 MRC2Q9UBG0 1479 aa28.76■■■□□ 2.19
LAPTM4B-204ENST00000619747 FHAD1B1AJZ9 1412 aa28.76■■■□□ 2.19
LAPTM4B-204ENST00000619747 TARBP1Q13395 1621 aaKnown RBP28.76■■■□□ 2.19
LAPTM4B-204ENST00000619747 CCNB3Q8WWL7 1395 aa28.74■■■□□ 2.19
LAPTM4B-204ENST00000619747 TIAM1Q13009 1591 aa28.73■■■□□ 2.19
LAPTM4B-204ENST00000619747 PCF11O94913 1555 aaKnown RBP28.71■■■□□ 2.19
LAPTM4B-204ENST00000619747 RRBP1Q9P2E9 1410 aaKnown RBP28.7■■■□□ 2.19
LAPTM4B-204ENST00000619747 CTTNBP2Q8WZ74 1663 aa28.69■■■□□ 2.18
LAPTM4B-204ENST00000619747 FAM50AQ14320 339 aaKnown RBP28.68■■■□□ 2.18
LAPTM4B-204ENST00000619747 LRRC9Q6ZRR7 1453 aa28.67■■■□□ 2.18
LAPTM4B-204ENST00000619747 ZNF608Q9ULD9 1512 aaPredicted RBP28.66■■■□□ 2.18
LAPTM4B-204ENST00000619747 ERCC6Q03468 1493 aa28.65■■■□□ 2.18
LAPTM4B-204ENST00000619747 PHLDB1Q86UU1 1377 aa28.65■■■□□ 2.18
LAPTM4B-204ENST00000619747 EFCAB5A4FU69 1503 aa28.61■■■□□ 2.17
LAPTM4B-204ENST00000619747 CASKIN1Q8WXD9 1431 aa28.57■■■□□ 2.16
LAPTM4B-204ENST00000619747 ARID3CA6NKF2 412 aa28.56■■■□□ 2.16
LAPTM4B-204ENST00000619747 MAP3K1Q13233 1512 aa28.56■■■□□ 2.16
LAPTM4B-204ENST00000619747 FMN1Q68DA7 1419 aa28.55■■■□□ 2.16
LAPTM4B-204ENST00000619747 PBRM1Q86U86 1689 aa28.53■■■□□ 2.16
LAPTM4B-204ENST00000619747 FYCO1Q9BQS8 1478 aa28.53■■■□□ 2.16
LAPTM4B-204ENST00000619747 DHX57Q6P158 1386 aaKnown RBP28.53■■■□□ 2.16
LAPTM4B-204ENST00000619747 DIEXFQ68CQ4 756 aaKnown RBP28.51■■■□□ 2.16
LAPTM4B-204ENST00000619747 GRIN2BQ13224 1484 aa28.51■■■□□ 2.15
LAPTM4B-204ENST00000619747 CENPBP07199 599 aaPredicted RBP28.51■■■□□ 2.15
LAPTM4B-204ENST00000619747 FBLN2P98095 1184 aa28.49■■■□□ 2.15
LAPTM4B-204ENST00000619747 IFT140Q96RY7 1462 aa28.48■■■□□ 2.15
LAPTM4B-204ENST00000619747 WDR62O43379 1518 aa28.47■■■□□ 2.15
LAPTM4B-204ENST00000619747 MTUS2Q5JR59 1369 aa28.47■■■□□ 2.15
LAPTM4B-204ENST00000619747 SNAPC4Q5SXM2 1469 aa28.45■■■□□ 2.15
LAPTM4B-204ENST00000619747 CFAP43Q8NDM7 1665 aa28.45■■■□□ 2.14
LAPTM4B-204ENST00000619747 ZNF316A6NFI3 1004 aaPredicted RBP28.44■■■□□ 2.14
LAPTM4B-204ENST00000619747 SAMD9Q5K651 1589 aa28.43■■■□□ 2.14
LAPTM4B-204ENST00000619747 ADAMTS12P58397 1594 aa28.42■■■□□ 2.14
LAPTM4B-204ENST00000619747 RAB3GAP2Q9H2M9 1393 aa28.4■■■□□ 2.14
LAPTM4B-204ENST00000619747 CHMP7Q8WUX9 453 aaPredicted RBP28.35■■■□□ 2.13
LAPTM4B-204ENST00000619747 IQGAP2Q13576 1575 aa28.35■■■□□ 2.13
LAPTM4B-204ENST00000619747 EIF4G3O43432 1585 aaKnown RBP28.31■■■□□ 2.12
LAPTM4B-204ENST00000619747 LRRIQ1Q96JM4 1722 aa28.3■■■□□ 2.12
LAPTM4B-204ENST00000619747 SETD5Q9C0A6 1442 aa28.28■■■□□ 2.12
LAPTM4B-204ENST00000619747 BCL11AQ9H165 835 aa28.28■■■□□ 2.12
LAPTM4B-204ENST00000619747 CLSPNQ9HAW4 1339 aa28.26■■■□□ 2.12
LAPTM4B-204ENST00000619747 THOC2Q8NI27 1593 aaKnown RBP28.26■■■□□ 2.11
LAPTM4B-204ENST00000619747 FGD6Q6ZV73 1430 aa28.24■■■□□ 2.11
LAPTM4B-204ENST00000619747 NCOA2Q15596 1464 aa28.22■■■□□ 2.11
LAPTM4B-204ENST00000619747 GRIN2AQ12879 1464 aa28.22■■■□□ 2.11
LAPTM4B-204ENST00000619747 KIAA0586Q9BVV6 1533 aa28.18■■■□□ 2.1
LAPTM4B-204ENST00000619747 CDK13Q14004 1512 aaKnown RBP28.18■■■□□ 2.1
LAPTM4B-204ENST00000619747 MAGI3Q5TCQ9 1506 aa28.18■■■□□ 2.1
LAPTM4B-204ENST00000619747 SIN3AQ96ST3 1273 aa28.16■■■□□ 2.1
LAPTM4B-204ENST00000619747 CHIC2Q9UKJ5 165 aa28.14■■■□□ 2.09
LAPTM4B-204ENST00000619747 EPRSP07814 1512 aaKnown RBP28.13■■■□□ 2.09
LAPTM4B-204ENST00000619747 MYOM3Q5VTT5 1437 aa28.12■■■□□ 2.09
LAPTM4B-204ENST00000619747 UGGT2Q9NYU1 1516 aa28.12■■■□□ 2.09
LAPTM4B-204ENST00000619747 PTPRKQ15262 1439 aa28.11■■■□□ 2.09
LAPTM4B-204ENST00000619747 DISP1Q96F81 1524 aa28.11■■■□□ 2.09
LAPTM4B-204ENST00000619747 MAGI1Q96QZ7 1491 aaPredicted RBP28.08■■■□□ 2.09
LAPTM4B-204ENST00000619747 SYNJ2O15056 1496 aa28.07■■■□□ 2.08
LAPTM4B-204ENST00000619747 CCDC18Q5T9S5 1454 aa28.07■■■□□ 2.08
LAPTM4B-204ENST00000619747 EHBP1L1Q8N3D4 1523 aa28.07■■■□□ 2.08
LAPTM4B-204ENST00000619747 HECW1Q76N89 1606 aa28.07■■■□□ 2.08
LAPTM4B-204ENST00000619747 JPH4Q96JJ6 628 aa28.07■■■□□ 2.08
LAPTM4B-204ENST00000619747 MAPKBP1O60336 1514 aa28.07■■■□□ 2.08
LAPTM4B-204ENST00000619747 SUPT6HQ7KZ85 1726 aaKnown RBP28.06■■■□□ 2.08
LAPTM4B-204ENST00000619747 RRP7BPQ9NSQ0 103 aa28.05■■■□□ 2.08
LAPTM4B-204ENST00000619747 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.05■■■□□ 2.081e-8■■□□□ 13.4
LAPTM4B-204ENST00000619747 KIAA0556O60303 1618 aa28.03■■■□□ 2.08
LAPTM4B-204ENST00000619747 CEP170Q5SW79 1584 aa28.03■■■□□ 2.08
LAPTM4B-204ENST00000619747 MIER1Q8N108 512 aa28.02■■■□□ 2.08
LAPTM4B-204ENST00000619747 YTHDC1Q96MU7 727 aaKnown RBP27.95■■■□□ 2.06
LAPTM4B-204ENST00000619747 NUP153P49790 1475 aaKnown RBP27.95■■■□□ 2.06
LAPTM4B-204ENST00000619747 PLB1Q6P1J6 1458 aa27.95■■■□□ 2.06
LAPTM4B-204ENST00000619747 PTPN23Q9H3S7 1636 aa27.94■■■□□ 2.06
LAPTM4B-204ENST00000619747 ZNF644Q9H582 1327 aaPredicted RBP27.92■■■□□ 2.06
LAPTM4B-204ENST00000619747 ARHGEF11O15085 1522 aa27.91■■■□□ 2.06
LAPTM4B-204ENST00000619747 CDK11AQ9UQ88 783 aaPredicted RBP27.9■■■□□ 2.06
LAPTM4B-204ENST00000619747 HFM1A2PYH4 1435 aa27.89■■■□□ 2.06
LAPTM4B-204ENST00000619747 NAIPQ13075 1403 aa27.88■■■□□ 2.05
LAPTM4B-204ENST00000619747 NUP160Q12769 1436 aa27.87■■■□□ 2.05
LAPTM4B-204ENST00000619747 PRG4Q92954 1404 aaPredicted RBP27.86■■■□□ 2.05
LAPTM4B-204ENST00000619747 CARMIL2Q6F5E8 1435 aa27.86■■■□□ 2.05
LAPTM4B-204ENST00000619747 RAPGEF6Q8TEU7 1601 aa27.86■■■□□ 2.05
LAPTM4B-204ENST00000619747 TRIM52Q96A61 297 aa27.86■■■□□ 2.05
LAPTM4B-204ENST00000619747 ZNF777Q9ULD5 760 aaPredicted RBP27.84■■■□□ 2.05
LAPTM4B-204ENST00000619747 HIRIP3Q9BW71 556 aaPredicted RBP27.79■■■□□ 2.04
LAPTM4B-204ENST00000619747 ANP32EQ9BTT0 268 aa27.77■■■□□ 2.04
LAPTM4B-204ENST00000619747 UACAQ9BZF9 1416 aa27.76■■■□□ 2.03
LAPTM4B-204ENST00000619747 TCOF1Q13428 1488 aaKnown RBP27.75■■■□□ 2.03
LAPTM4B-204ENST00000619747 CFDP1Q9UEE9 299 aaPredicted RBP27.75■■■□□ 2.03
LAPTM4B-204ENST00000619747 MIA2Q96PC5 1412 aa27.75■■■□□ 2.03
LAPTM4B-204ENST00000619747 FOXD1Q16676 465 aa27.71■■■□□ 2.03
LAPTM4B-204ENST00000619747 PLEKHD1A6NEE1 506 aa27.7■■■□□ 2.02
LAPTM4B-204ENST00000619747 TROQ12816 1431 aaPredicted RBP27.7■■■□□ 2.02
LAPTM4B-204ENST00000619747 PPP1R15AO75807 674 aaPredicted RBP27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms