RNA–Protein interactions for RNA: ENST00000619408.1

TVP23A-211, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-211ENST00000619408 CLIP1P30622 1438 aa12.06□□□□□ -0.48
TVP23A-211ENST00000619408 SNAPC4Q5SXM2 1469 aa12.05□□□□□ -0.48
TVP23A-211ENST00000619408 CTTNBP2Q8WZ74 1663 aa12.04□□□□□ -0.48
TVP23A-211ENST00000619408 MAGI1Q96QZ7 1491 aaPredicted RBP12.04□□□□□ -0.48
TVP23A-211ENST00000619408 RANGAP1P46060 587 aaPredicted RBP11.99□□□□□ -0.49
TVP23A-211ENST00000619408 SYNJ2O15056 1496 aa11.99□□□□□ -0.49
TVP23A-211ENST00000619408 GRIN2AQ12879 1464 aa11.97□□□□□ -0.49
TVP23A-211ENST00000619408 EFCAB5A4FU69 1503 aa11.96□□□□□ -0.49
TVP23A-211ENST00000619408 HRCP23327 699 aa11.96□□□□□ -0.49
TVP23A-211ENST00000619408 VPS8Q8N3P4 1428 aa11.95□□□□□ -0.5
TVP23A-211ENST00000619408 ARHGAP35Q9NRY4 1499 aa11.95□□□□□ -0.5
TVP23A-211ENST00000619408 IQGAP2Q13576 1575 aa11.94□□□□□ -0.5
TVP23A-211ENST00000619408 ARAP1Q96P48 1450 aa11.94□□□□□ -0.5
TVP23A-211ENST00000619408 CHMP7Q8WUX9 453 aaPredicted RBP11.93□□□□□ -0.5
TVP23A-211ENST00000619408 FBLN2P98095 1184 aa11.9□□□□□ -0.5
TVP23A-211ENST00000619408 KIAA0586Q9BVV6 1533 aa11.9□□□□□ -0.5
TVP23A-211ENST00000619408 SAMD9Q5K651 1589 aa11.89□□□□□ -0.51
TVP23A-211ENST00000619408 CEP170Q5SW79 1584 aa11.88□□□□□ -0.51
TVP23A-211ENST00000619408 NUP160Q12769 1436 aa11.88□□□□□ -0.51
TVP23A-211ENST00000619408 UGGT2Q9NYU1 1516 aa11.86□□□□□ -0.51
TVP23A-211ENST00000619408 CHD1O14646 1710 aa11.86□□□□□ -0.51
TVP23A-211ENST00000619408 FHOD3Q2V2M9 1422 aa11.86□□□□□ -0.51
TVP23A-211ENST00000619408 APLP2Q06481 763 aa11.85□□□□□ -0.51
TVP23A-211ENST00000619408 FMN1Q68DA7 1419 aa11.84□□□□□ -0.51
TVP23A-211ENST00000619408 FOXD1Q16676 465 aa11.83□□□□□ -0.52
TVP23A-211ENST00000619408 P3H3Q8IVL6 736 aa11.82□□□□□ -0.52
TVP23A-211ENST00000619408 PCF11O94913 1555 aaKnown RBP11.82□□□□□ -0.52
TVP23A-211ENST00000619408 KIAA0556O60303 1618 aa11.81□□□□□ -0.52
TVP23A-211ENST00000619408 FYCO1Q9BQS8 1478 aa11.81□□□□□ -0.52
TVP23A-211ENST00000619408 CARMIL2Q6F5E8 1435 aa11.78□□□□□ -0.52
TVP23A-211ENST00000619408 CASKIN1Q8WXD9 1431 aa11.78□□□□□ -0.52
TVP23A-211ENST00000619408 TRIM26Q12899 539 aaPredicted RBP11.78□□□□□ -0.52
TVP23A-211ENST00000619408 DISP1Q96F81 1524 aa11.77□□□□□ -0.52
TVP23A-211ENST00000619408 PPARGC1BQ86YN6 1023 aaKnown RBP11.77□□□□□ -0.53
TVP23A-211ENST00000619408 MAP3K1Q13233 1512 aa11.76□□□□□ -0.53
TVP23A-211ENST00000619408 CFAP43Q8NDM7 1665 aa11.76□□□□□ -0.53
TVP23A-211ENST00000619408 TIAM1Q13009 1591 aa11.75□□□□□ -0.53
TVP23A-211ENST00000619408 HECW1Q76N89 1606 aa11.75□□□□□ -0.53
TVP23A-211ENST00000619408 JPH4Q96JJ6 628 aa11.74□□□□□ -0.53
TVP23A-211ENST00000619408 SHROOM2Q13796 1616 aa11.74□□□□□ -0.53
TVP23A-211ENST00000619408 CLASP1Q7Z460 1538 aa11.73□□□□□ -0.53
TVP23A-211ENST00000619408 ATP1B4Q9UN42 357 aaPredicted RBP11.73□□□□□ -0.53
TVP23A-211ENST00000619408 PCGF6Q9BYE7 350 aa11.72□□□□□ -0.53
TVP23A-211ENST00000619408 CCDC18Q5T9S5 1454 aa11.71□□□□□ -0.53
TVP23A-211ENST00000619408 PRG4Q92954 1404 aaPredicted RBP11.71□□□□□ -0.53
TVP23A-211ENST00000619408 RAPGEF6Q8TEU7 1601 aa11.69□□□□□ -0.54
TVP23A-211ENST00000619408 LRRC9Q6ZRR7 1453 aa11.68□□□□□ -0.54
TVP23A-211ENST00000619408 KANK4Q5T7N3 995 aaPredicted RBP11.66□□□□□ -0.54
TVP23A-211ENST00000619408 LRRIQ1Q96JM4 1722 aa11.66□□□□□ -0.54
TVP23A-211ENST00000619408 EPRSP07814 1512 aaKnown RBP11.65□□□□□ -0.55
TVP23A-211ENST00000619408 EHBP1L1Q8N3D4 1523 aa11.65□□□□□ -0.55
TVP23A-211ENST00000619408 MTUS2Q5JR59 1369 aa11.64□□□□□ -0.55
TVP23A-211ENST00000619408 ABCA8O94911 1581 aa11.63□□□□□ -0.55
TVP23A-211ENST00000619408 PTPRGP23470 1445 aa11.63□□□□□ -0.55
TVP23A-211ENST00000619408 NUP153P49790 1475 aaKnown RBP11.63□□□□□ -0.55
TVP23A-211ENST00000619408 PLB1Q6P1J6 1458 aa11.63□□□□□ -0.55
TVP23A-211ENST00000619408 CDK13Q14004 1512 aaKnown RBP11.62□□□□□ -0.55
TVP23A-211ENST00000619408 OSCARQ8IYS5 282 aa11.61□□□□□ -0.55
TVP23A-211ENST00000619408 ERCC6L2Q5T890 1561 aa11.61□□□□□ -0.55
TVP23A-211ENST00000619408 SUPT6HQ7KZ85 1726 aaKnown RBP11.6□□□□□ -0.55
TVP23A-211ENST00000619408 UACAQ9BZF9 1416 aa11.58□□□□□ -0.56
TVP23A-211ENST00000619408 RRBP1Q9P2E9 1410 aaKnown RBP11.58□□□□□ -0.56
TVP23A-211ENST00000619408 ARID3CA6NKF2 412 aa11.57□□□□□ -0.56
TVP23A-211ENST00000619408 CDK11AQ9UQ88 783 aaPredicted RBP11.57□□□□□ -0.56
TVP23A-211ENST00000619408 MAGI3Q5TCQ9 1506 aa11.56□□□□□ -0.56
TVP23A-211ENST00000619408 ABCC2Q92887 1545 aa11.56□□□□□ -0.56
TVP23A-211ENST00000619408 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.56□□□□□ -0.56
TVP23A-211ENST00000619408 HNRNPUL2Q1KMD3 747 aaKnown RBP11.56□□□□□ -0.56
TVP23A-211ENST00000619408 NCOA2Q15596 1464 aa11.55□□□□□ -0.56
TVP23A-211ENST00000619408 PHLDB1Q86UU1 1377 aa11.54□□□□□ -0.56
TVP23A-211ENST00000619408 CCNB3Q8WWL7 1395 aa11.54□□□□□ -0.56
TVP23A-211ENST00000619408 TROQ12816 1431 aaPredicted RBP11.53□□□□□ -0.56
TVP23A-211ENST00000619408 UHRF1BP1LA0JNW5 1464 aa11.52□□□□□ -0.56
TVP23A-211ENST00000619408 ATP10BO94823 1461 aa11.52□□□□□ -0.56
TVP23A-211ENST00000619408 ARHGEF11O15085 1522 aa11.52□□□□□ -0.57
TVP23A-211ENST00000619408 MYOM3Q5VTT5 1437 aa11.52□□□□□ -0.57
TVP23A-211ENST00000619408 ADCY10Q96PN6 1610 aa11.51□□□□□ -0.57
TVP23A-211ENST00000619408 ZEB1P37275 1124 aaPredicted RBP11.51□□□□□ -0.57
TVP23A-211ENST00000619408 FGD6Q6ZV73 1430 aa11.51□□□□□ -0.57
TVP23A-211ENST00000619408 KIF14Q15058 1648 aa11.5□□□□□ -0.57
TVP23A-211ENST00000619408 PLEKHD1A6NEE1 506 aa11.48□□□□□ -0.57
TVP23A-211ENST00000619408 ITSN2Q9NZM3 1697 aa11.47□□□□□ -0.57
TVP23A-211ENST00000619408 ZCCHC11Q5TAX3 1644 aaKnown RBP11.47□□□□□ -0.57
TVP23A-211ENST00000619408 KDM5BQ9UGL1 1544 aa11.47□□□□□ -0.57
TVP23A-211ENST00000619408 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.47□□□□□ -0.57
TVP23A-211ENST00000619408 FAM50AQ14320 339 aaKnown RBP11.47□□□□□ -0.57
TVP23A-211ENST00000619408 PTPN23Q9H3S7 1636 aa11.46□□□□□ -0.58
TVP23A-211ENST00000619408 MIA2Q96PC5 1412 aa11.45□□□□□ -0.58
TVP23A-211ENST00000619408 TCOF1Q13428 1488 aaKnown RBP11.44□□□□□ -0.58
TVP23A-211ENST00000619408 ABCC10Q5T3U5 1492 aa11.41□□□□□ -0.58
TVP23A-211ENST00000619408 ITGAEP38570 1179 aa11.41□□□□□ -0.58
TVP23A-211ENST00000619408 GPATCH8Q9UKJ3 1502 aaKnown RBP11.4□□□□□ -0.59
TVP23A-211ENST00000619408 RIMBP3CA6NJZ7 1639 aa11.39□□□□□ -0.59
TVP23A-211ENST00000619408 RIMBP3BA6NNM3 1639 aa11.39□□□□□ -0.59
TVP23A-211ENST00000619408 RIMBP3Q9UFD9 1639 aa11.39□□□□□ -0.59
TVP23A-211ENST00000619408 WDR7Q9Y4E6 1490 aa11.38□□□□□ -0.59
TVP23A-211ENST00000619408 CDC42BPAQ5VT25 1732 aa11.38□□□□□ -0.59
TVP23A-211ENST00000619408 ILDR1Q86SU0 546 aaPredicted RBP11.38□□□□□ -0.59
TVP23A-211ENST00000619408 CFDP1Q9UEE9 299 aaPredicted RBP11.38□□□□□ -0.59
TVP23A-211ENST00000619408 PREX2Q70Z35 1606 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms