RNA–Protein interactions for RNA: ENST00000618934.1

PCDHGB3-202, Transcript of protocadherin gamma subfamily B, 3, humanhuman

APPRIS P1 BASIC

Gene PCDHGB3, Length 2,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-202ENST00000618934 TOPBP1Q92547 1522 aa28.31■■■□□ 2.12
PCDHGB3-202ENST00000618934 POLA1P09884 1462 aaPredicted RBP28.31■■■□□ 2.12
PCDHGB3-202ENST00000618934 MAP3K1Q13233 1512 aa28.28■■■□□ 2.12
PCDHGB3-202ENST00000618934 LRRC9Q6ZRR7 1453 aa28.28■■■□□ 2.12
PCDHGB3-202ENST00000618934 ABCA10Q8WWZ4 1543 aa28.27■■■□□ 2.12
PCDHGB3-202ENST00000618934 PHLDB1Q86UU1 1377 aa28.25■■■□□ 2.11
PCDHGB3-202ENST00000618934 ATP1B4Q9UN42 357 aaPredicted RBP28.22■■■□□ 2.11
PCDHGB3-202ENST00000618934 RAB3GAP2Q9H2M9 1393 aa28.22■■■□□ 2.11
PCDHGB3-202ENST00000618934 PCF11O94913 1555 aaKnown RBP28.22■■■□□ 2.11
PCDHGB3-202ENST00000618934 FHOD3Q2V2M9 1422 aa28.22■■■□□ 2.11
PCDHGB3-202ENST00000618934 FHAD1B1AJZ9 1412 aa28.18■■■□□ 2.1
PCDHGB3-202ENST00000618934 DNAJC5BQ9UF47 199 aa28.14■■■□□ 2.1
PCDHGB3-202ENST00000618934 CFAP43Q8NDM7 1665 aa28.14■■■□□ 2.1
PCDHGB3-202ENST00000618934 FAM50AQ14320 339 aaKnown RBP28.13■■■□□ 2.09
PCDHGB3-202ENST00000618934 URB2Q14146 1524 aaKnown RBP28.13■■■□□ 2.09
PCDHGB3-202ENST00000618934 MAPKBP1O60336 1514 aa28.12■■■□□ 2.09
PCDHGB3-202ENST00000618934 SETD5Q9C0A6 1442 aa28.08■■■□□ 2.09
PCDHGB3-202ENST00000618934 CUL7Q14999 1698 aa28.07■■■□□ 2.08
PCDHGB3-202ENST00000618934 TDRD9Q8NDG6 1382 aaKnown RBP28.06■■■□□ 2.08
PCDHGB3-202ENST00000618934 CTTNBP2Q8WZ74 1663 aa28.04■■■□□ 2.08
PCDHGB3-202ENST00000618934 WDR97A6NE52 1622 aa28.03■■■□□ 2.08
PCDHGB3-202ENST00000618934 CASKIN1Q8WXD9 1431 aa28.02■■■□□ 2.08
PCDHGB3-202ENST00000618934 FYCO1Q9BQS8 1478 aa28.02■■■□□ 2.08
PCDHGB3-202ENST00000618934 EFCAB5A4FU69 1503 aa28.02■■■□□ 2.08
PCDHGB3-202ENST00000618934 LAMC3Q9Y6N6 1575 aa28.02■■■□□ 2.08
PCDHGB3-202ENST00000618934 SIN3AQ96ST3 1273 aa27.97■■■□□ 2.07
PCDHGB3-202ENST00000618934 AQRO60306 1485 aaKnown RBP eCLIP27.95■■■□□ 2.06
PCDHGB3-202ENST00000618934 ABCA5Q8WWZ7 1642 aa27.93■■■□□ 2.06
PCDHGB3-202ENST00000618934 SNAPC4Q5SXM2 1469 aa27.91■■■□□ 2.06
PCDHGB3-202ENST00000618934 GAPVD1Q14C86 1478 aa27.91■■■□□ 2.06
PCDHGB3-202ENST00000618934 FMN1Q68DA7 1419 aa27.88■■■□□ 2.05
PCDHGB3-202ENST00000618934 KIF21AQ7Z4S6 1674 aa27.86■■■□□ 2.05
PCDHGB3-202ENST00000618934 LRRIQ1Q96JM4 1722 aa27.86■■■□□ 2.05
PCDHGB3-202ENST00000618934 PDS5BQ9NTI5 1447 aa27.85■■■□□ 2.05
PCDHGB3-202ENST00000618934 SAMD9Q5K651 1589 aa27.83■■■□□ 2.05
PCDHGB3-202ENST00000618934 FGD6Q6ZV73 1430 aa27.82■■■□□ 2.04
PCDHGB3-202ENST00000618934 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.8■■■□□ 2.04
PCDHGB3-202ENST00000618934 MTUS2Q5JR59 1369 aa27.79■■■□□ 2.04
PCDHGB3-202ENST00000618934 PTPRKQ15262 1439 aa27.77■■■□□ 2.04
PCDHGB3-202ENST00000618934 TARBP1Q13395 1621 aaKnown RBP27.75■■■□□ 2.03
PCDHGB3-202ENST00000618934 GRIN2BQ13224 1484 aa27.75■■■□□ 2.03
PCDHGB3-202ENST00000618934 KCNH8Q96L42 1107 aa27.72■■■□□ 2.03
PCDHGB3-202ENST00000618934 NCOA2Q15596 1464 aa27.69■■■□□ 2.02
PCDHGB3-202ENST00000618934 HIRIP3Q9BW71 556 aaPredicted RBP27.66■■■□□ 2.02
PCDHGB3-202ENST00000618934 PPP1R15AO75807 674 aaPredicted RBP27.64■■■□□ 2.02
PCDHGB3-202ENST00000618934 CCDC18Q5T9S5 1454 aa27.64■■■□□ 2.01
PCDHGB3-202ENST00000618934 MAGI3Q5TCQ9 1506 aa27.64■■■□□ 2.01
PCDHGB3-202ENST00000618934 DDX10Q13206 875 aaKnown RBP27.63■■■□□ 2.01
PCDHGB3-202ENST00000618934 MYOM3Q5VTT5 1437 aa27.63■■■□□ 2.01
PCDHGB3-202ENST00000618934 HFM1A2PYH4 1435 aa27.6■■■□□ 2.01
PCDHGB3-202ENST00000618934 TIMELESSQ9UNS1 1208 aa27.6■■■□□ 2.01
PCDHGB3-202ENST00000618934 PTPN23Q9H3S7 1636 aa27.59■■■□□ 2.01
PCDHGB3-202ENST00000618934 PBRM1Q86U86 1689 aa27.59■■■□□ 2.01
PCDHGB3-202ENST00000618934 SUPT6HQ7KZ85 1726 aaKnown RBP27.58■■■□□ 2.01
PCDHGB3-202ENST00000618934 THOC2Q8NI27 1593 aaKnown RBP27.57■■■□□ 2
PCDHGB3-202ENST00000618934 NAIPQ13075 1403 aa27.57■■■□□ 2
PCDHGB3-202ENST00000618934 EHBP1L1Q8N3D4 1523 aa27.56■■■□□ 2
PCDHGB3-202ENST00000618934 UGGT2Q9NYU1 1516 aa27.54■■■□□ 2
PCDHGB3-202ENST00000618934 UACAQ9BZF9 1416 aa27.53■■■□□ 2
PCDHGB3-202ENST00000618934 ARHGEF11O15085 1522 aa27.52■■■□□ 2
PCDHGB3-202ENST00000618934 ARID3CA6NKF2 412 aa27.51■■■□□ 2
PCDHGB3-202ENST00000618934 CHIC2Q9UKJ5 165 aa27.49■■□□□ 1.99
PCDHGB3-202ENST00000618934 IQGAP2Q13576 1575 aa27.49■■□□□ 1.99
PCDHGB3-202ENST00000618934 ADAMTS12P58397 1594 aa27.49■■□□□ 1.99
PCDHGB3-202ENST00000618934 RRP7BPQ9NSQ0 103 aa27.48■■□□□ 1.99
PCDHGB3-202ENST00000618934 TONSLQ96HA7 1378 aa27.47■■□□□ 1.99
PCDHGB3-202ENST00000618934 CDK13Q14004 1512 aaKnown RBP27.46■■□□□ 1.99
PCDHGB3-202ENST00000618934 SUPT16HQ9Y5B9 1047 aaKnown RBP27.46■■□□□ 1.99
PCDHGB3-202ENST00000618934 MRC2Q9UBG0 1479 aa27.45■■□□□ 1.98
PCDHGB3-202ENST00000618934 EPRSP07814 1512 aaKnown RBP27.44■■□□□ 1.98
PCDHGB3-202ENST00000618934 ZNF608Q9ULD9 1512 aaPredicted RBP27.43■■□□□ 1.98
PCDHGB3-202ENST00000618934 HECW1Q76N89 1606 aa27.43■■□□□ 1.98
PCDHGB3-202ENST00000618934 TCOF1Q13428 1488 aaKnown RBP27.39■■□□□ 1.97
PCDHGB3-202ENST00000618934 WDR62O43379 1518 aa27.37■■□□□ 1.97
PCDHGB3-202ENST00000618934 KDM6BO15054 1643 aa27.37■■□□□ 1.97
PCDHGB3-202ENST00000618934 KDM5BQ9UGL1 1544 aa27.36■■□□□ 1.97
PCDHGB3-202ENST00000618934 DENND4BO75064 1496 aaPredicted RBP27.35■■□□□ 1.97
PCDHGB3-202ENST00000618934 TRIM52Q96A61 297 aa27.3■■□□□ 1.96
PCDHGB3-202ENST00000618934 GCC2Q8IWJ2 1684 aa27.29■■□□□ 1.96
PCDHGB3-202ENST00000618934 IFT140Q96RY7 1462 aa27.27■■□□□ 1.96
PCDHGB3-202ENST00000618934 DISP1Q96F81 1524 aa27.26■■□□□ 1.95
PCDHGB3-202ENST00000618934 MIA2Q96PC5 1412 aa27.24■■□□□ 1.95
PCDHGB3-202ENST00000618934 FOXD1Q16676 465 aa27.23■■□□□ 1.95
PCDHGB3-202ENST00000618934 ANP32CO43423 234 aa27.22■■□□□ 1.95
PCDHGB3-202ENST00000618934 KIAA0586Q9BVV6 1533 aa27.21■■□□□ 1.95
PCDHGB3-202ENST00000618934 ZNF644Q9H582 1327 aaPredicted RBP27.21■■□□□ 1.95
PCDHGB3-202ENST00000618934 KIAA0556O60303 1618 aa27.21■■□□□ 1.95
PCDHGB3-202ENST00000618934 MPHOSPH9Q99550 1183 aa27.2■■□□□ 1.95
PCDHGB3-202ENST00000618934 AKNAQ7Z591 1439 aa27.19■■□□□ 1.94
PCDHGB3-202ENST00000618934 CCER2I3L3R5 266 aa27.19■■□□□ 1.94
PCDHGB3-202ENST00000618934 NUP153P49790 1475 aaKnown RBP27.18■■□□□ 1.94
PCDHGB3-202ENST00000618934 GRIN2AQ12879 1464 aa27.15■■□□□ 1.94
PCDHGB3-202ENST00000618934 EIF4G3O43432 1585 aaKnown RBP27.15■■□□□ 1.94
PCDHGB3-202ENST00000618934 DAPK1P53355 1430 aa27.12■■□□□ 1.93
PCDHGB3-202ENST00000618934 HSPA5P11021 654 aaKnown RBP27.12■■□□□ 1.93
PCDHGB3-202ENST00000618934 ABCC5O15440 1437 aa27.12■■□□□ 1.93
PCDHGB3-202ENST00000618934 RAPGEF6Q8TEU7 1601 aa27.1■■□□□ 1.93
PCDHGB3-202ENST00000618934 L3MBTL2Q969R5 705 aa27.1■■□□□ 1.93
PCDHGB3-202ENST00000618934 WASHC2AQ641Q2 1341 aa27.08■■□□□ 1.93
PCDHGB3-202ENST00000618934 BCANQ96GW7 911 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms