RNA–Protein interactions for RNA: ENST00000617999.4

UPK1A-204, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPK1A, Length 1,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-204ENST00000617999 IQGAP2Q13576 1575 aa24.92■■□□□ 1.58
UPK1A-204ENST00000617999 CLASP1Q7Z460 1538 aa24.91■■□□□ 1.58
UPK1A-204ENST00000617999 TNIKQ9UKE5 1360 aa24.89■■□□□ 1.57
UPK1A-204ENST00000617999 KIAA0586Q9BVV6 1533 aa24.85■■□□□ 1.57
UPK1A-204ENST00000617999 UBTFP17480 764 aaKnown RBP24.84■■□□□ 1.57
UPK1A-204ENST00000617999 SHROOM2Q13796 1616 aa24.82■■□□□ 1.56
UPK1A-204ENST00000617999 SAMD9Q5K651 1589 aa24.78■■□□□ 1.56
UPK1A-204ENST00000617999 CEP162Q5TB80 1403 aa24.78■■□□□ 1.56
UPK1A-204ENST00000617999 UGGT2Q9NYU1 1516 aa24.77■■□□□ 1.56
UPK1A-204ENST00000617999 EFCAB5A4FU69 1503 aa24.72■■□□□ 1.55
UPK1A-204ENST00000617999 KIAA0556O60303 1618 aa24.72■■□□□ 1.55
UPK1A-204ENST00000617999 CLIP1P30622 1438 aa24.69■■□□□ 1.54
UPK1A-204ENST00000617999 ARHGAP35Q9NRY4 1499 aa24.69■■□□□ 1.54
UPK1A-204ENST00000617999 DISP1Q96F81 1524 aa24.66■■□□□ 1.54
UPK1A-204ENST00000617999 ERCC6L2Q5T890 1561 aa24.65■■□□□ 1.54
UPK1A-204ENST00000617999 ARAP1Q96P48 1450 aa24.63■■□□□ 1.53
UPK1A-204ENST00000617999 RANGAP1P46060 587 aaPredicted RBP24.62■■□□□ 1.53
UPK1A-204ENST00000617999 OSCARQ8IYS5 282 aa24.61■■□□□ 1.53
UPK1A-204ENST00000617999 FHOD3Q2V2M9 1422 aa24.58■■□□□ 1.53
UPK1A-204ENST00000617999 PRG4Q92954 1404 aaPredicted RBP24.57■■□□□ 1.52
UPK1A-204ENST00000617999 JPH4Q96JJ6 628 aa24.54■■□□□ 1.52
UPK1A-204ENST00000617999 CARMIL2Q6F5E8 1435 aa24.5■■□□□ 1.51
UPK1A-204ENST00000617999 PCF11O94913 1555 aaKnown RBP24.49■■□□□ 1.51
UPK1A-204ENST00000617999 ARHGEF11O15085 1522 aa24.47■■□□□ 1.51
UPK1A-204ENST00000617999 RIMBP3CA6NJZ7 1639 aa24.46■■□□□ 1.51
UPK1A-204ENST00000617999 RIMBP3BA6NNM3 1639 aa24.46■■□□□ 1.51
UPK1A-204ENST00000617999 RIMBP3Q9UFD9 1639 aa24.46■■□□□ 1.51
UPK1A-204ENST00000617999 P3H3Q8IVL6 736 aa24.45■■□□□ 1.5
UPK1A-204ENST00000617999 VPS8Q8N3P4 1428 aa24.43■■□□□ 1.5
UPK1A-204ENST00000617999 LRRIQ1Q96JM4 1722 aa24.38■■□□□ 1.49
UPK1A-204ENST00000617999 RAPGEF6Q8TEU7 1601 aa24.38■■□□□ 1.49
UPK1A-204ENST00000617999 FMN1Q68DA7 1419 aa24.37■■□□□ 1.49
UPK1A-204ENST00000617999 ABCA8O94911 1581 aa24.37■■□□□ 1.49
UPK1A-204ENST00000617999 HECW1Q76N89 1606 aa24.34■■□□□ 1.49
UPK1A-204ENST00000617999 PLB1Q6P1J6 1458 aa24.32■■□□□ 1.48
UPK1A-204ENST00000617999 FYCO1Q9BQS8 1478 aa24.32■■□□□ 1.48
UPK1A-204ENST00000617999 CFAP43Q8NDM7 1665 aa24.3■■□□□ 1.48
UPK1A-204ENST00000617999 PTPRGP23470 1445 aa24.3■■□□□ 1.48
UPK1A-204ENST00000617999 CASKIN1Q8WXD9 1431 aa24.29■■□□□ 1.48
UPK1A-204ENST00000617999 TTBK1Q5TCY1 1321 aaPredicted RBP24.28■■□□□ 1.48
UPK1A-204ENST00000617999 ADCY10Q96PN6 1610 aa24.27■■□□□ 1.48
UPK1A-204ENST00000617999 ABCC2Q92887 1545 aa24.26■■□□□ 1.47
UPK1A-204ENST00000617999 NUP153P49790 1475 aaKnown RBP24.26■■□□□ 1.47
UPK1A-204ENST00000617999 UACAQ9BZF9 1416 aa24.21■■□□□ 1.47
UPK1A-204ENST00000617999 CDK13Q14004 1512 aaKnown RBP24.2■■□□□ 1.46
UPK1A-204ENST00000617999 UHRF1BP1LA0JNW5 1464 aa24.19■■□□□ 1.46
UPK1A-204ENST00000617999 TIAM1Q13009 1591 aa24.19■■□□□ 1.46
UPK1A-204ENST00000617999 EPRSP07814 1512 aaKnown RBP24.16■■□□□ 1.46
UPK1A-204ENST00000617999 ZCCHC11Q5TAX3 1644 aaKnown RBP24.16■■□□□ 1.46
UPK1A-204ENST00000617999 CCDC18Q5T9S5 1454 aa24.15■■□□□ 1.46
UPK1A-204ENST00000617999 MAP3K1Q13233 1512 aa24.1■■□□□ 1.45
UPK1A-204ENST00000617999 KDM5BQ9UGL1 1544 aa24.09■■□□□ 1.45
UPK1A-204ENST00000617999 MAGI3Q5TCQ9 1506 aa24.08■■□□□ 1.45
UPK1A-204ENST00000617999 ATP10BO94823 1461 aa24.07■■□□□ 1.44
UPK1A-204ENST00000617999 ARID3CA6NKF2 412 aa24.05■■□□□ 1.44
UPK1A-204ENST00000617999 ATP1B4Q9UN42 357 aaPredicted RBP24.04■■□□□ 1.44
UPK1A-204ENST00000617999 DNAJC5Q9H3Z4 198 aa24.03■■□□□ 1.44
UPK1A-204ENST00000617999 EHBP1L1Q8N3D4 1523 aa24.03■■□□□ 1.44
UPK1A-204ENST00000617999 CYB5RLQ6IPT4 315 aa23.99■■□□□ 1.43
UPK1A-204ENST00000617999 LRRC9Q6ZRR7 1453 aa23.99■■□□□ 1.43
UPK1A-204ENST00000617999 KIF14Q15058 1648 aa23.95■■□□□ 1.43
UPK1A-204ENST00000617999 SUPT6HQ7KZ85 1726 aaKnown RBP23.93■■□□□ 1.42
UPK1A-204ENST00000617999 MAPKBP1O60336 1514 aa23.92■■□□□ 1.42
UPK1A-204ENST00000617999 TROQ12816 1431 aaPredicted RBP23.91■■□□□ 1.42
UPK1A-204ENST00000617999 APLP2Q06481 763 aa23.9■■□□□ 1.42
UPK1A-204ENST00000617999 KANK4Q5T7N3 995 aaPredicted RBP23.9■■□□□ 1.42
UPK1A-204ENST00000617999 MTUS2Q5JR59 1369 aa23.89■■□□□ 1.41
UPK1A-204ENST00000617999 WDR7Q9Y4E6 1490 aa23.88■■□□□ 1.41
UPK1A-204ENST00000617999 ASXL2Q76L83 1435 aa23.87■■□□□ 1.41
UPK1A-204ENST00000617999 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.85■■□□□ 1.41
UPK1A-204ENST00000617999 HNRNPUL2Q1KMD3 747 aaKnown RBP23.85■■□□□ 1.41
UPK1A-204ENST00000617999 PPARGC1BQ86YN6 1023 aaKnown RBP23.85■■□□□ 1.41
UPK1A-204ENST00000617999 TTC37Q6PGP7 1564 aa23.85■■□□□ 1.41
UPK1A-204ENST00000617999 NCOA2Q15596 1464 aa23.82■■□□□ 1.4
UPK1A-204ENST00000617999 CDC42BPAQ5VT25 1732 aa23.79■■□□□ 1.4
UPK1A-204ENST00000617999 ABCC10Q5T3U5 1492 aa23.79■■□□□ 1.4
UPK1A-204ENST00000617999 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.79■■□□□ 1.4
UPK1A-204ENST00000617999 DIP2BQ9P265 1576 aa23.78■■□□□ 1.4
UPK1A-204ENST00000617999 ABCA9Q8IUA7 1624 aa23.77■■□□□ 1.4
UPK1A-204ENST00000617999 ITSN2Q9NZM3 1697 aa23.77■■□□□ 1.4
UPK1A-204ENST00000617999 CDK11AQ9UQ88 783 aaPredicted RBP23.77■■□□□ 1.4
UPK1A-204ENST00000617999 MYO5CQ9NQX4 1742 aa23.76■■□□□ 1.39
UPK1A-204ENST00000617999 PREX2Q70Z35 1606 aa23.76■■□□□ 1.39
UPK1A-204ENST00000617999 NPM1P06748 294 aaKnown RBP eCLIP23.75■■□□□ 1.39
UPK1A-204ENST00000617999 KIF13AQ9H1H9 1805 aa23.75■■□□□ 1.39
UPK1A-204ENST00000617999 PLEKHD1A6NEE1 506 aa23.74■■□□□ 1.39
UPK1A-204ENST00000617999 PHLDB1Q86UU1 1377 aa23.73■■□□□ 1.39
UPK1A-204ENST00000617999 CDC42BPBQ9Y5S2 1711 aa23.7■■□□□ 1.39
UPK1A-204ENST00000617999 MAP3K4Q9Y6R4 1608 aa23.69■■□□□ 1.38
UPK1A-204ENST00000617999 GLI2P10070 1586 aa23.69■■□□□ 1.38
UPK1A-204ENST00000617999 MYOM3Q5VTT5 1437 aa23.67■■□□□ 1.38
UPK1A-204ENST00000617999 GPATCH8Q9UKJ3 1502 aaKnown RBP23.64■■□□□ 1.38
UPK1A-204ENST00000617999 PPRC1Q5VV67 1664 aaKnown RBP23.62■■□□□ 1.37
UPK1A-204ENST00000617999 PTPN23Q9H3S7 1636 aa23.62■■□□□ 1.37
UPK1A-204ENST00000617999 FGD6Q6ZV73 1430 aa23.61■■□□□ 1.37
UPK1A-204ENST00000617999 KCNH8Q96L42 1107 aa23.61■■□□□ 1.37
UPK1A-204ENST00000617999 CCNB3Q8WWL7 1395 aa23.61■■□□□ 1.37
UPK1A-204ENST00000617999 ARAP3Q8WWN8 1544 aa23.6■■□□□ 1.37
UPK1A-204ENST00000617999 RRBP1Q9P2E9 1410 aaKnown RBP23.59■■□□□ 1.37
UPK1A-204ENST00000617999 SAMD9LQ8IVG5 1584 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms