RNA–Protein interactions for RNA: ENST00000617799.1

SBDS-205, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SBDS, Length 953 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-205ENST00000617799 RIMBP3Q9UFD9 1639 aa28.52■■■□□ 2.16
SBDS-205ENST00000617799 PRXQ9BXM0 1461 aa28.49■■■□□ 2.15
SBDS-205ENST00000617799 KIAA0586Q9BVV6 1533 aa28.44■■■□□ 2.14
SBDS-205ENST00000617799 SHROOM2Q13796 1616 aa28.42■■■□□ 2.14
SBDS-205ENST00000617799 IQGAP2Q13576 1575 aa28.37■■■□□ 2.13
SBDS-205ENST00000617799 JPH4Q96JJ6 628 aa28.36■■■□□ 2.13
SBDS-205ENST00000617799 CTTNBP2Q8WZ74 1663 aa28.35■■■□□ 2.13
SBDS-205ENST00000617799 KIF21BO75037 1637 aa28.33■■■□□ 2.13
SBDS-205ENST00000617799 PRG4Q92954 1404 aaPredicted RBP28.33■■■□□ 2.13
SBDS-205ENST00000617799 ERCC6L2Q5T890 1561 aa28.32■■■□□ 2.12
SBDS-205ENST00000617799 ARAP1Q96P48 1450 aa28.31■■■□□ 2.12
SBDS-205ENST00000617799 CYB5RLQ6IPT4 315 aa28.26■■■□□ 2.11
SBDS-205ENST00000617799 EHMT2Q96KQ7 1210 aa28.25■■■□□ 2.11
SBDS-205ENST00000617799 GOLGA3Q08378 1498 aa28.2■■■□□ 2.1
SBDS-205ENST00000617799 CARMIL2Q6F5E8 1435 aa28.18■■■□□ 2.1
SBDS-205ENST00000617799 UGGT2Q9NYU1 1516 aa28.18■■■□□ 2.1
SBDS-205ENST00000617799 UBTFP17480 764 aaKnown RBP28.13■■■□□ 2.09
SBDS-205ENST00000617799 DISP1Q96F81 1524 aa28.09■■■□□ 2.09
SBDS-205ENST00000617799 KIAA0556O60303 1618 aa28.08■■■□□ 2.09
SBDS-205ENST00000617799 TTBK1Q5TCY1 1321 aaPredicted RBP28.08■■■□□ 2.09
SBDS-205ENST00000617799 RANGAP1P46060 587 aaPredicted RBP28.05■■■□□ 2.08
SBDS-205ENST00000617799 TNIKQ9UKE5 1360 aa28.04■■■□□ 2.08
SBDS-205ENST00000617799 PTPRGP23470 1445 aa28.01■■■□□ 2.08
SBDS-205ENST00000617799 SAMD9Q5K651 1589 aa27.94■■■□□ 2.06
SBDS-205ENST00000617799 P3H3Q8IVL6 736 aa27.93■■■□□ 2.06
SBDS-205ENST00000617799 EFCAB5A4FU69 1503 aa27.9■■■□□ 2.06
SBDS-205ENST00000617799 ADCY10Q96PN6 1610 aa27.88■■■□□ 2.05
SBDS-205ENST00000617799 UACAQ9BZF9 1416 aa27.83■■■□□ 2.05
SBDS-205ENST00000617799 FHOD3Q2V2M9 1422 aa27.82■■■□□ 2.04
SBDS-205ENST00000617799 NPM1P06748 294 aaKnown RBP eCLIP27.81■■■□□ 2.04
SBDS-205ENST00000617799 ABCC2Q92887 1545 aa27.79■■■□□ 2.04
SBDS-205ENST00000617799 PLB1Q6P1J6 1458 aa27.77■■■□□ 2.04
SBDS-205ENST00000617799 UHRF1BP1LA0JNW5 1464 aa27.76■■■□□ 2.04
SBDS-205ENST00000617799 ARHGAP35Q9NRY4 1499 aa27.75■■■□□ 2.03
SBDS-205ENST00000617799 ABCA8O94911 1581 aa27.73■■■□□ 2.03
SBDS-205ENST00000617799 LOC105371045A0A1W2PR82 267 aa27.73■■■□□ 2.03
SBDS-205ENST00000617799 CLIP1P30622 1438 aa27.69■■■□□ 2.02
SBDS-205ENST00000617799 TRHP20396 242 aaPredicted RBP27.68■■■□□ 2.02
SBDS-205ENST00000617799 RAPGEF6Q8TEU7 1601 aa27.67■■■□□ 2.02
SBDS-205ENST00000617799 ZCCHC11Q5TAX3 1644 aaKnown RBP27.64■■■□□ 2.02
SBDS-205ENST00000617799 MAPKBP1O60336 1514 aa27.63■■■□□ 2.01
SBDS-205ENST00000617799 KDM5BQ9UGL1 1544 aa27.63■■■□□ 2.01
SBDS-205ENST00000617799 CEP162Q5TB80 1403 aa27.62■■■□□ 2.01
SBDS-205ENST00000617799 FMN1Q68DA7 1419 aa27.62■■■□□ 2.01
SBDS-205ENST00000617799 ARID3CA6NKF2 412 aa27.6■■■□□ 2.01
SBDS-205ENST00000617799 ASXL2Q76L83 1435 aa27.54■■■□□ 2
SBDS-205ENST00000617799 NUP153P49790 1475 aaKnown RBP27.53■■■□□ 2
SBDS-205ENST00000617799 ATP1B4Q9UN42 357 aaPredicted RBP27.53■■■□□ 2
SBDS-205ENST00000617799 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.51■■□□□ 1.99
SBDS-205ENST00000617799 HNRNPUL2Q1KMD3 747 aaKnown RBP27.51■■□□□ 1.99
SBDS-205ENST00000617799 HECW1Q76N89 1606 aa27.51■■□□□ 1.99
SBDS-205ENST00000617799 ATP10BO94823 1461 aa27.5■■□□□ 1.99
SBDS-205ENST00000617799 DIP2BQ9P265 1576 aa27.48■■□□□ 1.99
SBDS-205ENST00000617799 ABCC10Q5T3U5 1492 aa27.47■■□□□ 1.99
SBDS-205ENST00000617799 PCF11O94913 1555 aaKnown RBP27.47■■□□□ 1.99
SBDS-205ENST00000617799 KIF13AQ9H1H9 1805 aa27.46■■□□□ 1.99
SBDS-205ENST00000617799 WDR7Q9Y4E6 1490 aa27.45■■□□□ 1.99
SBDS-205ENST00000617799 FAM69CQ0P6D2 419 aa27.44■■□□□ 1.98
SBDS-205ENST00000617799 CDK13Q14004 1512 aaKnown RBP27.41■■□□□ 1.98
SBDS-205ENST00000617799 CASKIN1Q8WXD9 1431 aa27.41■■□□□ 1.98
SBDS-205ENST00000617799 FYCO1Q9BQS8 1478 aa27.38■■□□□ 1.97
SBDS-205ENST00000617799 EPRSP07814 1512 aaKnown RBP27.38■■□□□ 1.97
SBDS-205ENST00000617799 KCNH8Q96L42 1107 aa27.35■■□□□ 1.97
SBDS-205ENST00000617799 LRRIQ1Q96JM4 1722 aa27.33■■□□□ 1.97
SBDS-205ENST00000617799 GLI2P10070 1586 aa27.33■■□□□ 1.97
SBDS-205ENST00000617799 CCDC18Q5T9S5 1454 aa27.32■■□□□ 1.96
SBDS-205ENST00000617799 PLEKHD1A6NEE1 506 aa27.31■■□□□ 1.96
SBDS-205ENST00000617799 TSPOAP1O95153 1857 aa27.29■■□□□ 1.96
SBDS-205ENST00000617799 CDK11AQ9UQ88 783 aaPredicted RBP27.27■■□□□ 1.96
SBDS-205ENST00000617799 VPS8Q8N3P4 1428 aa27.25■■□□□ 1.95
SBDS-205ENST00000617799 MAP3K4Q9Y6R4 1608 aa27.24■■□□□ 1.95
SBDS-205ENST00000617799 CFAP43Q8NDM7 1665 aa27.22■■□□□ 1.95
SBDS-205ENST00000617799 ABCA9Q8IUA7 1624 aa27.18■■□□□ 1.94
SBDS-205ENST00000617799 CD109Q6YHK3 1445 aa27.16■■□□□ 1.94
SBDS-205ENST00000617799 TROQ12816 1431 aaPredicted RBP27.16■■□□□ 1.94
SBDS-205ENST00000617799 KIF14Q15058 1648 aa27.15■■□□□ 1.94
SBDS-205ENST00000617799 PPRC1Q5VV67 1664 aaKnown RBP27.14■■□□□ 1.93
SBDS-205ENST00000617799 TEX14Q8IWB6 1497 aa27.13■■□□□ 1.93
SBDS-205ENST00000617799 MAGI3Q5TCQ9 1506 aa27.11■■□□□ 1.93
SBDS-205ENST00000617799 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.11■■□□□ 1.93
SBDS-205ENST00000617799 TTC37Q6PGP7 1564 aa27.1■■□□□ 1.93
SBDS-205ENST00000617799 MTUS2Q5JR59 1369 aa27.07■■□□□ 1.92
SBDS-205ENST00000617799 TIAM1Q13009 1591 aa27.05■■□□□ 1.92
SBDS-205ENST00000617799 EHBP1L1Q8N3D4 1523 aa27.02■■□□□ 1.92
SBDS-205ENST00000617799 APLP2Q06481 763 aa27.02■■□□□ 1.92
SBDS-205ENST00000617799 KDM6BO15054 1643 aa27.01■■□□□ 1.92
SBDS-205ENST00000617799 MYO5CQ9NQX4 1742 aa27.01■■□□□ 1.91
SBDS-205ENST00000617799 MAP3K1Q13233 1512 aa26.95■■□□□ 1.91
SBDS-205ENST00000617799 CFAP74Q9C0B2 1584 aa26.95■■□□□ 1.9
SBDS-205ENST00000617799 FANCAO15360 1455 aa26.93■■□□□ 1.9
SBDS-205ENST00000617799 PLCH2O75038 1416 aa26.92■■□□□ 1.9
SBDS-205ENST00000617799 LRRC9Q6ZRR7 1453 aa26.92■■□□□ 1.9
SBDS-205ENST00000617799 NEO1Q92859 1461 aa26.92■■□□□ 1.9
SBDS-205ENST00000617799 ARHGAP5Q13017 1502 aa26.91■■□□□ 1.9
SBDS-205ENST00000617799 SUPT6HQ7KZ85 1726 aaKnown RBP26.9■■□□□ 1.9
SBDS-205ENST00000617799 PREX2Q70Z35 1606 aa26.9■■□□□ 1.9
SBDS-205ENST00000617799 PHLDB1Q86UU1 1377 aa26.88■■□□□ 1.89
SBDS-205ENST00000617799 ARAP3Q8WWN8 1544 aa26.88■■□□□ 1.89
SBDS-205ENST00000617799 CDC42BPAQ5VT25 1732 aa26.87■■□□□ 1.89
SBDS-205ENST00000617799 CCNB3Q8WWL7 1395 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms