RNA–Protein interactions for RNA: ENST00000617797.1

CUL1-204, Transcript of cullin 1, humanhuman

TSL 1 (best) BASIC

Gene CUL1, Length 2,508 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1-204ENST00000617797 MSH5O43196 834 aa9.96□□□□□ -0.81
CUL1-204ENST00000617797 IGF1RP08069 1367 aa9.96□□□□□ -0.82
CUL1-204ENST00000617797 POLA1P09884 1462 aaPredicted RBP9.95□□□□□ -0.82
CUL1-204ENST00000617797 KIF21AQ7Z4S6 1674 aa9.95□□□□□ -0.82
CUL1-204ENST00000617797 WDR97A6NE52 1622 aa9.94□□□□□ -0.82
CUL1-204ENST00000617797 RAD54L2Q9Y4B4 1467 aa9.94□□□□□ -0.82
CUL1-204ENST00000617797 ABCA10Q8WWZ4 1543 aa9.94□□□□□ -0.82
CUL1-204ENST00000617797 SLC4A2P04920 1241 aa9.93□□□□□ -0.82
CUL1-204ENST00000617797 URB2Q14146 1524 aaKnown RBP9.93□□□□□ -0.82
CUL1-204ENST00000617797 CARMIL1Q5VZK9 1371 aa9.92□□□□□ -0.82
CUL1-204ENST00000617797 APLP2Q06481 763 aa9.92□□□□□ -0.82
CUL1-204ENST00000617797 ARHGAP35Q9NRY4 1499 aa9.91□□□□□ -0.82
CUL1-204ENST00000617797 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.9□□□□□ -0.82
CUL1-204ENST00000617797 ATXN8OSP0DMR3 200 aa9.9□□□□□ -0.82
CUL1-204ENST00000617797 PDS5BQ9NTI5 1447 aa9.9□□□□□ -0.82
CUL1-204ENST00000617797 CUL7Q14999 1698 aa9.9□□□□□ -0.83
CUL1-204ENST00000617797 CCER1Q8TC90 406 aaPredicted RBP9.88□□□□□ -0.83
CUL1-204ENST00000617797 CTTNBP2Q8WZ74 1663 aa9.87□□□□□ -0.83
CUL1-204ENST00000617797 ABCA5Q8WWZ7 1642 aa9.87□□□□□ -0.83
CUL1-204ENST00000617797 MYCNP04198 464 aaPredicted RBP9.84□□□□□ -0.83
CUL1-204ENST00000617797 HOXD11P31277 338 aaPredicted RBP9.83□□□□□ -0.84
CUL1-204ENST00000617797 TARBP1Q13395 1621 aaKnown RBP9.83□□□□□ -0.84
CUL1-204ENST00000617797 PRKCSHP14314 528 aaPredicted RBP9.82□□□□□ -0.84
CUL1-204ENST00000617797 KANK4Q5T7N3 995 aaPredicted RBP9.81□□□□□ -0.84
CUL1-204ENST00000617797 GAPVD1Q14C86 1478 aa9.81□□□□□ -0.84
CUL1-204ENST00000617797 HNRNPUL2Q1KMD3 747 aaKnown RBP9.81□□□□□ -0.84
CUL1-204ENST00000617797 PBRM1Q86U86 1689 aa9.81□□□□□ -0.84
CUL1-204ENST00000617797 TDRD9Q8NDG6 1382 aaKnown RBP9.8□□□□□ -0.84
CUL1-204ENST00000617797 TIAM1Q13009 1591 aa9.8□□□□□ -0.84
CUL1-204ENST00000617797 EFCAB5A4FU69 1503 aa9.79□□□□□ -0.84
CUL1-204ENST00000617797 CFAP43Q8NDM7 1665 aa9.79□□□□□ -0.84
CUL1-204ENST00000617797 PCF11O94913 1555 aaKnown RBP9.79□□□□□ -0.84
CUL1-204ENST00000617797 MAP3K1Q13233 1512 aa9.79□□□□□ -0.84
CUL1-204ENST00000617797 MRC2Q9UBG0 1479 aa9.78□□□□□ -0.84
CUL1-204ENST00000617797 FHAD1B1AJZ9 1412 aa9.77□□□□□ -0.85
CUL1-204ENST00000617797 RRBP1Q9P2E9 1410 aaKnown RBP9.76□□□□□ -0.85
CUL1-204ENST00000617797 DMRT2Q9Y5R5 561 aa9.76□□□□□ -0.85
CUL1-204ENST00000617797 FHOD3Q2V2M9 1422 aa9.75□□□□□ -0.85
CUL1-204ENST00000617797 SAMD9Q5K651 1589 aa9.74□□□□□ -0.85
CUL1-204ENST00000617797 P3H3Q8IVL6 736 aa9.74□□□□□ -0.85
CUL1-204ENST00000617797 LRRC9Q6ZRR7 1453 aa9.73□□□□□ -0.85
CUL1-204ENST00000617797 WDR62O43379 1518 aa9.73□□□□□ -0.85
CUL1-204ENST00000617797 FYCO1Q9BQS8 1478 aa9.72□□□□□ -0.85
CUL1-204ENST00000617797 ADAMTS12P58397 1594 aa9.72□□□□□ -0.85
CUL1-204ENST00000617797 AQRO60306 1485 aaKnown RBP eCLIP9.72□□□□□ -0.853e-7■■■■■ 27.1
CUL1-204ENST00000617797 CASKIN1Q8WXD9 1431 aa9.71□□□□□ -0.86
CUL1-204ENST00000617797 CCNB3Q8WWL7 1395 aa9.71□□□□□ -0.86
CUL1-204ENST00000617797 LRRIQ1Q96JM4 1722 aa9.7□□□□□ -0.86
CUL1-204ENST00000617797 IFT140Q96RY7 1462 aa9.69□□□□□ -0.86
CUL1-204ENST00000617797 FMN1Q68DA7 1419 aa9.69□□□□□ -0.86
CUL1-204ENST00000617797 SNAPC4Q5SXM2 1469 aa9.69□□□□□ -0.86
CUL1-204ENST00000617797 GRIN2BQ13224 1484 aa9.68□□□□□ -0.86
CUL1-204ENST00000617797 THOC2Q8NI27 1593 aaKnown RBP9.68□□□□□ -0.86
CUL1-204ENST00000617797 ATP1B4Q9UN42 357 aaPredicted RBP9.67□□□□□ -0.86
CUL1-204ENST00000617797 ZNF608Q9ULD9 1512 aaPredicted RBP9.67□□□□□ -0.86
CUL1-204ENST00000617797 IQGAP2Q13576 1575 aa9.66□□□□□ -0.86
CUL1-204ENST00000617797 PHLDB1Q86UU1 1377 aa9.66□□□□□ -0.86
CUL1-204ENST00000617797 EIF4G3O43432 1585 aaKnown RBP9.66□□□□□ -0.86
CUL1-204ENST00000617797 ERCC6Q03468 1493 aa9.66□□□□□ -0.86
CUL1-204ENST00000617797 DHX57Q6P158 1386 aaKnown RBP9.65□□□□□ -0.87
CUL1-204ENST00000617797 ITGAEP38570 1179 aa9.62□□□□□ -0.87
CUL1-204ENST00000617797 CLSPNQ9HAW4 1339 aa9.62□□□□□ -0.87
CUL1-204ENST00000617797 HECW1Q76N89 1606 aa9.6□□□□□ -0.87
CUL1-204ENST00000617797 SUPT6HQ7KZ85 1726 aaKnown RBP9.6□□□□□ -0.87
CUL1-204ENST00000617797 UGGT2Q9NYU1 1516 aa9.6□□□□□ -0.87
CUL1-204ENST00000617797 EHBP1L1Q8N3D4 1523 aa9.59□□□□□ -0.87
CUL1-204ENST00000617797 MTUS2Q5JR59 1369 aa9.59□□□□□ -0.87
CUL1-204ENST00000617797 FAM50AQ14320 339 aaKnown RBP9.58□□□□□ -0.88
CUL1-204ENST00000617797 ATF5Q9Y2D1 282 aaPredicted RBP9.58□□□□□ -0.88
CUL1-204ENST00000617797 GRIN2AQ12879 1464 aa9.58□□□□□ -0.88
CUL1-204ENST00000617797 RAB3GAP2Q9H2M9 1393 aa9.58□□□□□ -0.88
CUL1-204ENST00000617797 ZNF316A6NFI3 1004 aaPredicted RBP9.58□□□□□ -0.88
CUL1-204ENST00000617797 CCDC18Q5T9S5 1454 aa9.58□□□□□ -0.88
CUL1-204ENST00000617797 KIAA0556O60303 1618 aa9.57□□□□□ -0.88
CUL1-204ENST00000617797 KIAA0586Q9BVV6 1533 aa9.57□□□□□ -0.88
CUL1-204ENST00000617797 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.57□□□□□ -0.88
CUL1-204ENST00000617797 SETD5Q9C0A6 1442 aa9.57□□□□□ -0.88
CUL1-204ENST00000617797 MAGI1Q96QZ7 1491 aaPredicted RBP9.57□□□□□ -0.88
CUL1-204ENST00000617797 FGD6Q6ZV73 1430 aa9.56□□□□□ -0.88
CUL1-204ENST00000617797 DIEXFQ68CQ4 756 aaKnown RBP9.56□□□□□ -0.88
CUL1-204ENST00000617797 MAGI3Q5TCQ9 1506 aa9.56□□□□□ -0.88
CUL1-204ENST00000617797 NCOA2Q15596 1464 aa9.56□□□□□ -0.88
CUL1-204ENST00000617797 ARHGEF11O15085 1522 aa9.54□□□□□ -0.88
CUL1-204ENST00000617797 EPRSP07814 1512 aaKnown RBP9.54□□□□□ -0.88
CUL1-204ENST00000617797 DISP1Q96F81 1524 aa9.54□□□□□ -0.88
CUL1-204ENST00000617797 CEP170Q5SW79 1584 aa9.54□□□□□ -0.88
CUL1-204ENST00000617797 PLCB2Q00722 1185 aa9.53□□□□□ -0.88
CUL1-204ENST00000617797 MYOM3Q5VTT5 1437 aa9.53□□□□□ -0.88
CUL1-204ENST00000617797 SYNJ2O15056 1496 aa9.53□□□□□ -0.88
CUL1-204ENST00000617797 MAPKBP1O60336 1514 aa9.53□□□□□ -0.88
CUL1-204ENST00000617797 CDK13Q14004 1512 aaKnown RBP9.53□□□□□ -0.88
CUL1-204ENST00000617797 PTPN23Q9H3S7 1636 aa9.53□□□□□ -0.88
CUL1-204ENST00000617797 RAPGEF6Q8TEU7 1601 aa9.52□□□□□ -0.89
CUL1-204ENST00000617797 CHMP7Q8WUX9 453 aaPredicted RBP9.49□□□□□ -0.89
CUL1-204ENST00000617797 NUP160Q12769 1436 aa9.48□□□□□ -0.89
CUL1-204ENST00000617797 PTPRKQ15262 1439 aa9.48□□□□□ -0.89
CUL1-204ENST00000617797 TCOF1Q13428 1488 aaKnown RBP9.48□□□□□ -0.89
CUL1-204ENST00000617797 NUP153P49790 1475 aaKnown RBP9.47□□□□□ -0.89
CUL1-204ENST00000617797 GCC2Q8IWJ2 1684 aa9.47□□□□□ -0.89
CUL1-204ENST00000617797 FBLN2P98095 1184 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms