RNA–Protein interactions for RNA: ENST00000617003.1

AP3S2-216, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

BASIC

Gene AP3S2, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-216ENST00000617003 JPH4Q96JJ6 628 aa27.26■■□□□ 1.95
AP3S2-216ENST00000617003 EEA1Q15075 1411 aa27.26■■□□□ 1.95
AP3S2-216ENST00000617003 PRXQ9BXM0 1461 aa27.23■■□□□ 1.95
AP3S2-216ENST00000617003 KIAA0586Q9BVV6 1533 aa27.23■■□□□ 1.95
AP3S2-216ENST00000617003 CYB5RLQ6IPT4 315 aa27.22■■□□□ 1.95
AP3S2-216ENST00000617003 SHROOM2Q13796 1616 aa27.2■■□□□ 1.95
AP3S2-216ENST00000617003 ARAP1Q96P48 1450 aa27.17■■□□□ 1.94
AP3S2-216ENST00000617003 ERCC6L2Q5T890 1561 aa27.16■■□□□ 1.94
AP3S2-216ENST00000617003 PRG4Q92954 1404 aaPredicted RBP27.15■■□□□ 1.94
AP3S2-216ENST00000617003 IQGAP2Q13576 1575 aa27.07■■□□□ 1.92
AP3S2-216ENST00000617003 CTTNBP2Q8WZ74 1663 aa27.02■■□□□ 1.92
AP3S2-216ENST00000617003 KIF21BO75037 1637 aa26.97■■□□□ 1.91
AP3S2-216ENST00000617003 EHMT2Q96KQ7 1210 aa26.96■■□□□ 1.91
AP3S2-216ENST00000617003 CARMIL2Q6F5E8 1435 aa26.94■■□□□ 1.9
AP3S2-216ENST00000617003 UGGT2Q9NYU1 1516 aa26.93■■□□□ 1.9
AP3S2-216ENST00000617003 DISP1Q96F81 1524 aa26.9■■□□□ 1.9
AP3S2-216ENST00000617003 TTBK1Q5TCY1 1321 aaPredicted RBP26.87■■□□□ 1.89
AP3S2-216ENST00000617003 TNIKQ9UKE5 1360 aa26.86■■□□□ 1.89
AP3S2-216ENST00000617003 UBTFP17480 764 aaKnown RBP26.85■■□□□ 1.89
AP3S2-216ENST00000617003 PTPRGP23470 1445 aa26.84■■□□□ 1.89
AP3S2-216ENST00000617003 GOLGA3Q08378 1498 aa26.84■■□□□ 1.89
AP3S2-216ENST00000617003 KIAA0556O60303 1618 aa26.81■■□□□ 1.88
AP3S2-216ENST00000617003 RANGAP1P46060 587 aaPredicted RBP26.8■■□□□ 1.88
AP3S2-216ENST00000617003 P3H3Q8IVL6 736 aa26.75■■□□□ 1.87
AP3S2-216ENST00000617003 ADCY10Q96PN6 1610 aa26.68■■□□□ 1.86
AP3S2-216ENST00000617003 SAMD9Q5K651 1589 aa26.67■■□□□ 1.86
AP3S2-216ENST00000617003 NPM1P06748 294 aaKnown RBP eCLIP26.66■■□□□ 1.86
AP3S2-216ENST00000617003 UACAQ9BZF9 1416 aa26.65■■□□□ 1.86
AP3S2-216ENST00000617003 TRHP20396 242 aaPredicted RBP26.62■■□□□ 1.85
AP3S2-216ENST00000617003 UHRF1BP1LA0JNW5 1464 aa26.59■■□□□ 1.85
AP3S2-216ENST00000617003 PLB1Q6P1J6 1458 aa26.58■■□□□ 1.85
AP3S2-216ENST00000617003 FHOD3Q2V2M9 1422 aa26.57■■□□□ 1.84
AP3S2-216ENST00000617003 ABCC2Q92887 1545 aa26.57■■□□□ 1.84
AP3S2-216ENST00000617003 EFCAB5A4FU69 1503 aa26.55■■□□□ 1.84
AP3S2-216ENST00000617003 ABCA8O94911 1581 aa26.52■■□□□ 1.84
AP3S2-216ENST00000617003 LOC105371045A0A1W2PR82 267 aa26.52■■□□□ 1.84
AP3S2-216ENST00000617003 ARHGAP35Q9NRY4 1499 aa26.49■■□□□ 1.83
AP3S2-216ENST00000617003 MAPKBP1O60336 1514 aa26.47■■□□□ 1.83
AP3S2-216ENST00000617003 KDM5BQ9UGL1 1544 aa26.47■■□□□ 1.83
AP3S2-216ENST00000617003 ZCCHC11Q5TAX3 1644 aaKnown RBP26.42■■□□□ 1.82
AP3S2-216ENST00000617003 ARID3CA6NKF2 412 aa26.41■■□□□ 1.82
AP3S2-216ENST00000617003 RAPGEF6Q8TEU7 1601 aa26.41■■□□□ 1.82
AP3S2-216ENST00000617003 ASXL2Q76L83 1435 aa26.39■■□□□ 1.81
AP3S2-216ENST00000617003 FAM69CQ0P6D2 419 aa26.37■■□□□ 1.81
AP3S2-216ENST00000617003 CLIP1P30622 1438 aa26.37■■□□□ 1.81
AP3S2-216ENST00000617003 ABCC10Q5T3U5 1492 aa26.37■■□□□ 1.81
AP3S2-216ENST00000617003 KIF13AQ9H1H9 1805 aa26.37■■□□□ 1.81
AP3S2-216ENST00000617003 ATP10BO94823 1461 aa26.35■■□□□ 1.81
AP3S2-216ENST00000617003 FMN1Q68DA7 1419 aa26.34■■□□□ 1.81
AP3S2-216ENST00000617003 NUP153P49790 1475 aaKnown RBP26.32■■□□□ 1.8
AP3S2-216ENST00000617003 DIP2BQ9P265 1576 aa26.3■■□□□ 1.8
AP3S2-216ENST00000617003 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.3■■□□□ 1.8
AP3S2-216ENST00000617003 HNRNPUL2Q1KMD3 747 aaKnown RBP26.3■■□□□ 1.8
AP3S2-216ENST00000617003 ATP1B4Q9UN42 357 aaPredicted RBP26.29■■□□□ 1.8
AP3S2-216ENST00000617003 CEP162Q5TB80 1403 aa26.28■■□□□ 1.8
AP3S2-216ENST00000617003 KCNH8Q96L42 1107 aa26.25■■□□□ 1.79
AP3S2-216ENST00000617003 WDR7Q9Y4E6 1490 aa26.25■■□□□ 1.79
AP3S2-216ENST00000617003 EPRSP07814 1512 aaKnown RBP26.23■■□□□ 1.79
AP3S2-216ENST00000617003 GLI2P10070 1586 aa26.19■■□□□ 1.78
AP3S2-216ENST00000617003 TSPOAP1O95153 1857 aa26.18■■□□□ 1.78
AP3S2-216ENST00000617003 HECW1Q76N89 1606 aa26.18■■□□□ 1.78
AP3S2-216ENST00000617003 PLEKHD1A6NEE1 506 aa26.16■■□□□ 1.78
AP3S2-216ENST00000617003 CASKIN1Q8WXD9 1431 aa26.16■■□□□ 1.78
AP3S2-216ENST00000617003 CDK13Q14004 1512 aaKnown RBP26.16■■□□□ 1.78
AP3S2-216ENST00000617003 PCF11O94913 1555 aaKnown RBP26.13■■□□□ 1.77
AP3S2-216ENST00000617003 LRRIQ1Q96JM4 1722 aa26.11■■□□□ 1.77
AP3S2-216ENST00000617003 MAP3K4Q9Y6R4 1608 aa26.07■■□□□ 1.76
AP3S2-216ENST00000617003 FYCO1Q9BQS8 1478 aa26.07■■□□□ 1.76
AP3S2-216ENST00000617003 CDK11AQ9UQ88 783 aaPredicted RBP26.06■■□□□ 1.76
AP3S2-216ENST00000617003 CD109Q6YHK3 1445 aa26.04■■□□□ 1.76
AP3S2-216ENST00000617003 PPRC1Q5VV67 1664 aaKnown RBP26.03■■□□□ 1.76
AP3S2-216ENST00000617003 CFAP43Q8NDM7 1665 aa26.02■■□□□ 1.76
AP3S2-216ENST00000617003 CCDC18Q5T9S5 1454 aa26.01■■□□□ 1.75
AP3S2-216ENST00000617003 ABCA9Q8IUA7 1624 aa25.98■■□□□ 1.75
AP3S2-216ENST00000617003 VPS8Q8N3P4 1428 aa25.95■■□□□ 1.75
AP3S2-216ENST00000617003 TROQ12816 1431 aaPredicted RBP25.94■■□□□ 1.74
AP3S2-216ENST00000617003 MAGI3Q5TCQ9 1506 aa25.94■■□□□ 1.74
AP3S2-216ENST00000617003 TEX14Q8IWB6 1497 aa25.93■■□□□ 1.74
AP3S2-216ENST00000617003 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.92■■□□□ 1.74
AP3S2-216ENST00000617003 TTC37Q6PGP7 1564 aa25.87■■□□□ 1.73
AP3S2-216ENST00000617003 KIF14Q15058 1648 aa25.87■■□□□ 1.73
AP3S2-216ENST00000617003 KDM6BO15054 1643 aa25.86■■□□□ 1.73
AP3S2-216ENST00000617003 COL17A1Q9UMD9 1497 aaPredicted RBP25.83■■□□□ 1.73
AP3S2-216ENST00000617003 MTUS2Q5JR59 1369 aa25.8■■□□□ 1.72
AP3S2-216ENST00000617003 PLCH2O75038 1416 aa25.79■■□□□ 1.72
AP3S2-216ENST00000617003 PHLDB1Q86UU1 1377 aa25.76■■□□□ 1.71
AP3S2-216ENST00000617003 MYO5CQ9NQX4 1742 aa25.76■■□□□ 1.71
AP3S2-216ENST00000617003 NEO1Q92859 1461 aa25.76■■□□□ 1.71
AP3S2-216ENST00000617003 TIAM1Q13009 1591 aa25.75■■□□□ 1.71
AP3S2-216ENST00000617003 FANCAO15360 1455 aa25.74■■□□□ 1.71
AP3S2-216ENST00000617003 EFCAB2Q5VUJ9 269 aa25.73■■□□□ 1.71
AP3S2-216ENST00000617003 AKNAQ7Z591 1439 aa25.72■■□□□ 1.71
AP3S2-216ENST00000617003 ARAP3Q8WWN8 1544 aa25.72■■□□□ 1.71
AP3S2-216ENST00000617003 EHBP1L1Q8N3D4 1523 aa25.71■■□□□ 1.71
AP3S2-216ENST00000617003 APLP2Q06481 763 aa25.7■■□□□ 1.71
AP3S2-216ENST00000617003 KANK4Q5T7N3 995 aaPredicted RBP25.69■■□□□ 1.7
AP3S2-216ENST00000617003 MAP3K1Q13233 1512 aa25.69■■□□□ 1.7
AP3S2-216ENST00000617003 CDC42BPBQ9Y5S2 1711 aa25.69■■□□□ 1.7
AP3S2-216ENST00000617003 CFAP74Q9C0B2 1584 aa25.68■■□□□ 1.7
AP3S2-216ENST00000617003 RAPGEF3O95398 923 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms