RNA–Protein interactions for RNA: ENST00000616714.4

STIM1-220, Transcript of stromal interaction molecule 1, humanhuman

TSL 1 (best) BASIC

Gene STIM1, Length 4,356 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STIM1-220ENST00000616714 CCDC136Q96JN2 1154 aa18.58■□□□□ 0.56
STIM1-220ENST00000616714 RRP7BPQ9NSQ0 103 aa18.57■□□□□ 0.56
STIM1-220ENST00000616714 SMARCA2P51531 1590 aa18.56■□□□□ 0.56
STIM1-220ENST00000616714 SUPT16HQ9Y5B9 1047 aaKnown RBP18.56■□□□□ 0.56
STIM1-220ENST00000616714 CARMIL1Q5VZK9 1371 aa18.55■□□□□ 0.56
STIM1-220ENST00000616714 NEFMP07197 916 aa18.51■□□□□ 0.55
STIM1-220ENST00000616714 ZBTB47Q9UFB7 747 aaPredicted RBP18.51■□□□□ 0.55
STIM1-220ENST00000616714 CUX2O14529 1486 aa18.5■□□□□ 0.55
STIM1-220ENST00000616714 SIN3AQ96ST3 1273 aa18.49■□□□□ 0.55
STIM1-220ENST00000616714 SETD5Q9C0A6 1442 aa18.49■□□□□ 0.55
STIM1-220ENST00000616714 NPM2Q86SE8 214 aaKnown RBP18.47■□□□□ 0.55
STIM1-220ENST00000616714 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.47■□□□□ 0.55
STIM1-220ENST00000616714 CCER2I3L3R5 266 aa18.46■□□□□ 0.55
STIM1-220ENST00000616714 KANK4Q5T7N3 995 aaPredicted RBP18.46■□□□□ 0.55
STIM1-220ENST00000616714 CHMP7Q8WUX9 453 aaPredicted RBP18.46■□□□□ 0.55
STIM1-220ENST00000616714 ANP32EQ9BTT0 268 aa18.46■□□□□ 0.55
STIM1-220ENST00000616714 IRX6P78412 446 aaPredicted RBP18.42■□□□□ 0.54
STIM1-220ENST00000616714 PLEKHD1A6NEE1 506 aa18.41■□□□□ 0.54
STIM1-220ENST00000616714 KDM2AQ9Y2K7 1162 aa18.41■□□□□ 0.54
STIM1-220ENST00000616714 SMARCA4P51532 1647 aa18.4■□□□□ 0.54
STIM1-220ENST00000616714 RUSC2Q8N2Y8 1516 aa18.39■□□□□ 0.54
STIM1-220ENST00000616714 WDR43Q15061 677 aaKnown RBP eCLIP18.39■□□□□ 0.53
STIM1-220ENST00000616714 CFDP1Q9UEE9 299 aaPredicted RBP18.38■□□□□ 0.53
STIM1-220ENST00000616714 ARHGAP35Q9NRY4 1499 aa18.37■□□□□ 0.53
STIM1-220ENST00000616714 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.37■□□□□ 0.53
STIM1-220ENST00000616714 UPF2Q9HAU5 1272 aaKnown RBP18.37■□□□□ 0.53
STIM1-220ENST00000616714 SALL2Q9Y467 1007 aaPredicted RBP18.37■□□□□ 0.53
STIM1-220ENST00000616714 RAPGEF2Q9Y4G8 1499 aa18.36■□□□□ 0.53
STIM1-220ENST00000616714 RAB3GAP2Q9H2M9 1393 aa18.35■□□□□ 0.53
STIM1-220ENST00000616714 PPP4R2Q9NY27 417 aa18.35■□□□□ 0.53
STIM1-220ENST00000616714 DHX57Q6P158 1386 aaKnown RBP18.31■□□□□ 0.52
STIM1-220ENST00000616714 FMN1Q68DA7 1419 aa18.3■□□□□ 0.52
STIM1-220ENST00000616714 ATAD2BQ9ULI0 1458 aa18.3■□□□□ 0.52
STIM1-220ENST00000616714 CHGAP10645 457 aaKnown RBP18.28■□□□□ 0.52
STIM1-220ENST00000616714 CARD11Q9BXL7 1154 aa18.28■□□□□ 0.52
STIM1-220ENST00000616714 CDCA8Q53HL2 280 aa18.27■□□□□ 0.51
STIM1-220ENST00000616714 ERICH6BQ5W0A0 696 aa18.26■□□□□ 0.51
STIM1-220ENST00000616714 PPP1R15AO75807 674 aaPredicted RBP18.25■□□□□ 0.51
STIM1-220ENST00000616714 NPM1P06748 294 aaKnown RBP eCLIP18.25■□□□□ 0.51
STIM1-220ENST00000616714 NBR1Q14596 966 aa18.23■□□□□ 0.51
STIM1-220ENST00000616714 DDRGK1Q96HY6 314 aa18.22■□□□□ 0.51
STIM1-220ENST00000616714 CADPSQ9ULU8 1353 aa18.18■□□□□ 0.5
STIM1-220ENST00000616714 HSPA5P11021 654 aaKnown RBP18.18■□□□□ 0.5
STIM1-220ENST00000616714 TSHZ2Q9NRE2 1034 aa18.18■□□□□ 0.5
STIM1-220ENST00000616714 RGL3Q3MIN7 710 aa18.16■□□□□ 0.5
STIM1-220ENST00000616714 RBM19Q9Y4C8 960 aaKnown RBP18.16■□□□□ 0.5
STIM1-220ENST00000616714 KNSTRNQ9Y448 316 aa18.15■□□□□ 0.5
STIM1-220ENST00000616714 HSP90AA1P07900 732 aaKnown RBP18.14■□□□□ 0.49
STIM1-220ENST00000616714 STAG3Q9UJ98 1225 aa18.13■□□□□ 0.49
STIM1-220ENST00000616714 EIF4G1Q04637 1599 aaKnown RBP18.13■□□□□ 0.49
STIM1-220ENST00000616714 SLC24A1O60721 1099 aa18.12■□□□□ 0.49
STIM1-220ENST00000616714 ANP32BQ92688 251 aaKnown RBP18.12■□□□□ 0.49
STIM1-220ENST00000616714 PDS5BQ9NTI5 1447 aa18.11■□□□□ 0.49
STIM1-220ENST00000616714 MPHOSPH9Q99550 1183 aa18.09■□□□□ 0.49
STIM1-220ENST00000616714 ESF1Q9H501 851 aaKnown RBP18.09■□□□□ 0.49
STIM1-220ENST00000616714 PPM1GO15355 546 aaPredicted RBP18.09■□□□□ 0.49
STIM1-220ENST00000616714 BECN1Q14457 450 aa18.07■□□□□ 0.48
STIM1-220ENST00000616714 KIF21BO75037 1637 aa18.07■□□□□ 0.48
STIM1-220ENST00000616714 KCNH8Q96L42 1107 aa18.07■□□□□ 0.48
STIM1-220ENST00000616714 B4GALNT3Q6L9W6 998 aa18.06■□□□□ 0.48
STIM1-220ENST00000616714 BCL11AQ9H165 835 aa18.06■□□□□ 0.48
STIM1-220ENST00000616714 FHOD3Q2V2M9 1422 aa18.06■□□□□ 0.48
STIM1-220ENST00000616714 CFAP53Q96M91 514 aa18.05■□□□□ 0.48
STIM1-220ENST00000616714 NOP58Q9Y2X3 529 aaKnown RBP18.05■□□□□ 0.48
STIM1-220ENST00000616714 TDRD9Q8NDG6 1382 aaKnown RBP18.04■□□□□ 0.48
STIM1-220ENST00000616714 TMF1P82094 1093 aa18.03■□□□□ 0.48
STIM1-220ENST00000616714 DCAF11Q8TEB1 546 aa18.03■□□□□ 0.48
STIM1-220ENST00000616714 PKD2Q13563 968 aa18.01■□□□□ 0.47
STIM1-220ENST00000616714 CARMIL2Q6F5E8 1435 aa17.99■□□□□ 0.47
STIM1-220ENST00000616714 ANKRD30AQ9BXX3 1397 aa17.98■□□□□ 0.47
STIM1-220ENST00000616714 L3MBTL2Q969R5 705 aa17.98■□□□□ 0.47
STIM1-220ENST00000616714 RALBP1Q15311 655 aa17.98■□□□□ 0.47
STIM1-220ENST00000616714 SENP3-EIF4A1A0A087X0R7 540 aa17.97■□□□□ 0.47
STIM1-220ENST00000616714 IGF1RP08069 1367 aa17.96■□□□□ 0.47
STIM1-220ENST00000616714 EIF5BO60841 1220 aaKnown RBP17.96■□□□□ 0.47
STIM1-220ENST00000616714 CCDC18Q5T9S5 1454 aa17.96■□□□□ 0.47
STIM1-220ENST00000616714 MYH16Q9H6N6 1097 aa17.95■□□□□ 0.46
STIM1-220ENST00000616714 ERCC6Q03468 1493 aa17.95■□□□□ 0.46
STIM1-220ENST00000616714 ERICH3Q5RHP9 1530 aa17.95■□□□□ 0.46
STIM1-220ENST00000616714 ROCK2O75116 1388 aaKnown RBP17.94■□□□□ 0.46
STIM1-220ENST00000616714 KTN1Q86UP2 1357 aaKnown RBP17.94■□□□□ 0.46
STIM1-220ENST00000616714 FOXD1Q16676 465 aa17.93■□□□□ 0.46
STIM1-220ENST00000616714 SYNJ1O43426 1573 aa17.92■□□□□ 0.46
STIM1-220ENST00000616714 CC2D1BQ5T0F9 858 aaKnown RBP17.92■□□□□ 0.46
STIM1-220ENST00000616714 RRBP1Q9P2E9 1410 aaKnown RBP17.91■□□□□ 0.46
STIM1-220ENST00000616714 NUP155O75694 1391 aa17.91■□□□□ 0.46
STIM1-220ENST00000616714 NCAPD3P42695 1498 aa17.9■□□□□ 0.46
STIM1-220ENST00000616714 MS4A1P11836 297 aa17.89■□□□□ 0.46
STIM1-220ENST00000616714 NUDCQ9Y266 331 aa17.89■□□□□ 0.46
STIM1-220ENST00000616714 FANCD2Q9BXW9 1451 aa17.89■□□□□ 0.45
STIM1-220ENST00000616714 RSPH4AQ5TD94 716 aa17.88■□□□□ 0.45
STIM1-220ENST00000616714 KANK1Q14678 1352 aa17.87■□□□□ 0.45
STIM1-220ENST00000616714 ARAP1Q96P48 1450 aa17.86■□□□□ 0.45
STIM1-220ENST00000616714 PDE3BQ13370 1112 aa17.86■□□□□ 0.45
STIM1-220ENST00000616714 TCERG1O14776 1098 aaKnown RBP17.85■□□□□ 0.45
STIM1-220ENST00000616714 RCAN3Q9UKA8 241 aa17.85■□□□□ 0.45
STIM1-220ENST00000616714 FTSJ3Q8IY81 847 aaKnown RBP17.85■□□□□ 0.45
STIM1-220ENST00000616714 FGD5Q6ZNL6 1462 aa17.84■□□□□ 0.45
STIM1-220ENST00000616714 LRRC9Q6ZRR7 1453 aa17.84■□□□□ 0.45
STIM1-220ENST00000616714 PRXQ9BXM0 1461 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms