RNA–Protein interactions for RNA: ENST00000616641.4

PITX2-213, Transcript of paired like homeodomain 2, humanhuman

TSL 5 BASIC

Gene PITX2, Length 3,102 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITX2-213ENST00000616641 FANCD2Q9BXW9 1451 aa16.81■□□□□ 0.28
PITX2-213ENST00000616641 CCNB3Q8WWL7 1395 aa16.78■□□□□ 0.28
PITX2-213ENST00000616641 DHX57Q6P158 1386 aaKnown RBP16.77■□□□□ 0.27
PITX2-213ENST00000616641 ARID3CA6NKF2 412 aa16.76■□□□□ 0.27
PITX2-213ENST00000616641 TDRD9Q8NDG6 1382 aaKnown RBP16.74■□□□□ 0.27
PITX2-213ENST00000616641 FHOD3Q2V2M9 1422 aa16.72■□□□□ 0.27
PITX2-213ENST00000616641 TSHZ2Q9NRE2 1034 aa16.69■□□□□ 0.26
PITX2-213ENST00000616641 SIN3AQ96ST3 1273 aa16.68■□□□□ 0.26
PITX2-213ENST00000616641 SLC24A1O60721 1099 aa16.66■□□□□ 0.26
PITX2-213ENST00000616641 RAB3GAP2Q9H2M9 1393 aa16.66■□□□□ 0.26
PITX2-213ENST00000616641 HIRIP3Q9BW71 556 aaPredicted RBP16.65■□□□□ 0.26
PITX2-213ENST00000616641 POLA1P09884 1462 aaPredicted RBP16.65■□□□□ 0.26
PITX2-213ENST00000616641 PHLDB1Q86UU1 1377 aa16.65■□□□□ 0.26
PITX2-213ENST00000616641 RRBP1Q9P2E9 1410 aaKnown RBP16.64■□□□□ 0.25
PITX2-213ENST00000616641 TOPBP1Q92547 1522 aa16.63■□□□□ 0.25
PITX2-213ENST00000616641 FHAD1B1AJZ9 1412 aa16.58■□□□□ 0.25
PITX2-213ENST00000616641 LRRC9Q6ZRR7 1453 aa16.58■□□□□ 0.24
PITX2-213ENST00000616641 SUPT16HQ9Y5B9 1047 aaKnown RBP16.57■□□□□ 0.24
PITX2-213ENST00000616641 CLSPNQ9HAW4 1339 aa16.57■□□□□ 0.24
PITX2-213ENST00000616641 PRDM2Q13029 1718 aa16.56■□□□□ 0.24
PITX2-213ENST00000616641 TIAM1Q13009 1591 aa16.56■□□□□ 0.24
PITX2-213ENST00000616641 MTUS2Q5JR59 1369 aa16.56■□□□□ 0.24
PITX2-213ENST00000616641 CHIC2Q9UKJ5 165 aa16.55■□□□□ 0.24
PITX2-213ENST00000616641 DNMBPQ6XZF7 1577 aa16.54■□□□□ 0.24
PITX2-213ENST00000616641 SETD5Q9C0A6 1442 aa16.53■□□□□ 0.24
PITX2-213ENST00000616641 ANO8Q9HCE9 1232 aaPredicted RBP16.53■□□□□ 0.24
PITX2-213ENST00000616641 DDX10Q13206 875 aaKnown RBP16.52■□□□□ 0.24
PITX2-213ENST00000616641 PCF11O94913 1555 aaKnown RBP16.52■□□□□ 0.23
PITX2-213ENST00000616641 URB2Q14146 1524 aaKnown RBP16.51■□□□□ 0.23
PITX2-213ENST00000616641 ABCA10Q8WWZ4 1543 aa16.51■□□□□ 0.23
PITX2-213ENST00000616641 BCANQ96GW7 911 aa16.49■□□□□ 0.23
PITX2-213ENST00000616641 KCNH8Q96L42 1107 aa16.48■□□□□ 0.23
PITX2-213ENST00000616641 RRP7BPQ9NSQ0 103 aa16.48■□□□□ 0.23
PITX2-213ENST00000616641 PDS5BQ9NTI5 1447 aa16.47■□□□□ 0.23
PITX2-213ENST00000616641 GAPVD1Q14C86 1478 aa16.47■□□□□ 0.23
PITX2-213ENST00000616641 FBLN2P98095 1184 aa16.46■□□□□ 0.23
PITX2-213ENST00000616641 TRIM52Q96A61 297 aa16.45■□□□□ 0.22
PITX2-213ENST00000616641 AQRO60306 1485 aaKnown RBP eCLIP16.42■□□□□ 0.22
PITX2-213ENST00000616641 FMN1Q68DA7 1419 aa16.41■□□□□ 0.22
PITX2-213ENST00000616641 CASKIN1Q8WXD9 1431 aa16.4■□□□□ 0.22
PITX2-213ENST00000616641 FYCO1Q9BQS8 1478 aa16.37■□□□□ 0.21
PITX2-213ENST00000616641 MAPKBP1O60336 1514 aa16.37■□□□□ 0.21
PITX2-213ENST00000616641 TONSLQ96HA7 1378 aa16.36■□□□□ 0.21
PITX2-213ENST00000616641 LAMC3Q9Y6N6 1575 aa16.36■□□□□ 0.21
PITX2-213ENST00000616641 FGD6Q6ZV73 1430 aa16.35■□□□□ 0.21
PITX2-213ENST00000616641 MAP3K1Q13233 1512 aa16.34■□□□□ 0.21
PITX2-213ENST00000616641 CCDC136Q96JN2 1154 aa16.34■□□□□ 0.21
PITX2-213ENST00000616641 EIF5BO60841 1220 aaKnown RBP16.33■□□□□ 0.21
PITX2-213ENST00000616641 FOXD1Q16676 465 aa16.33■□□□□ 0.2
PITX2-213ENST00000616641 CUL7Q14999 1698 aa16.32■□□□□ 0.2
PITX2-213ENST00000616641 WDR97A6NE52 1622 aa16.32■□□□□ 0.2
PITX2-213ENST00000616641 EFCAB5A4FU69 1503 aa16.32■□□□□ 0.2
PITX2-213ENST00000616641 KIF21AQ7Z4S6 1674 aa16.31■□□□□ 0.2
PITX2-213ENST00000616641 PPP1R15AO75807 674 aaPredicted RBP16.31■□□□□ 0.2
PITX2-213ENST00000616641 PTPRKQ15262 1439 aa16.3■□□□□ 0.2
PITX2-213ENST00000616641 CNGB1Q14028 1251 aaPredicted RBP16.3■□□□□ 0.2
PITX2-213ENST00000616641 NCOA2Q15596 1464 aa16.29■□□□□ 0.2
PITX2-213ENST00000616641 CTTNBP2Q8WZ74 1663 aa16.29■□□□□ 0.2
PITX2-213ENST00000616641 ZNF777Q9ULD5 760 aaPredicted RBP16.29■□□□□ 0.2
PITX2-213ENST00000616641 CFAP43Q8NDM7 1665 aa16.28■□□□□ 0.2
PITX2-213ENST00000616641 CCDC18Q5T9S5 1454 aa16.27■□□□□ 0.2
PITX2-213ENST00000616641 RBM19Q9Y4C8 960 aaKnown RBP16.26■□□□□ 0.19
PITX2-213ENST00000616641 SNAPC4Q5SXM2 1469 aa16.26■□□□□ 0.19
PITX2-213ENST00000616641 CHMP7Q8WUX9 453 aaPredicted RBP16.24■□□□□ 0.19
PITX2-213ENST00000616641 SALL2Q9Y467 1007 aaPredicted RBP16.24■□□□□ 0.19
PITX2-213ENST00000616641 MYOM3Q5VTT5 1437 aa16.24■□□□□ 0.19
PITX2-213ENST00000616641 ANP32CO43423 234 aa16.23■□□□□ 0.19
PITX2-213ENST00000616641 PLEKHG5O94827 1062 aa16.23■□□□□ 0.19
PITX2-213ENST00000616641 ZNF608Q9ULD9 1512 aaPredicted RBP16.23■□□□□ 0.19
PITX2-213ENST00000616641 ZNF644Q9H582 1327 aaPredicted RBP16.23■□□□□ 0.19
PITX2-213ENST00000616641 ABCA5Q8WWZ7 1642 aa16.22■□□□□ 0.19
PITX2-213ENST00000616641 CDK13Q14004 1512 aaKnown RBP16.21■□□□□ 0.19
PITX2-213ENST00000616641 MSH5O43196 834 aa16.19■□□□□ 0.18
PITX2-213ENST00000616641 POLR3GLQ9BT43 218 aa16.19■□□□□ 0.18
PITX2-213ENST00000616641 GRIN2BQ13224 1484 aa16.18■□□□□ 0.18
PITX2-213ENST00000616641 ERCC6Q03468 1493 aa16.18■□□□□ 0.18
PITX2-213ENST00000616641 ZNF326Q5BKZ1 582 aaKnown RBP16.18■□□□□ 0.18
PITX2-213ENST00000616641 NAIPQ13075 1403 aa16.18■□□□□ 0.18
PITX2-213ENST00000616641 MAGI3Q5TCQ9 1506 aa16.15■□□□□ 0.18
PITX2-213ENST00000616641 HFM1A2PYH4 1435 aa16.15■□□□□ 0.18
PITX2-213ENST00000616641 MRC2Q9UBG0 1479 aa16.15■□□□□ 0.18
PITX2-213ENST00000616641 UACAQ9BZF9 1416 aa16.15■□□□□ 0.18
PITX2-213ENST00000616641 TIMELESSQ9UNS1 1208 aa16.14■□□□□ 0.18
PITX2-213ENST00000616641 TARBP1Q13395 1621 aaKnown RBP16.14■□□□□ 0.17
PITX2-213ENST00000616641 MPHOSPH9Q99550 1183 aa16.14■□□□□ 0.17
PITX2-213ENST00000616641 DEKP35659 375 aaKnown RBP16.14■□□□□ 0.17
PITX2-213ENST00000616641 FKBP8Q14318 412 aa16.14■□□□□ 0.17
PITX2-213ENST00000616641 SAMD9Q5K651 1589 aa16.13■□□□□ 0.17
PITX2-213ENST00000616641 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.13■□□□□ 0.17
PITX2-213ENST00000616641 LRRIQ1Q96JM4 1722 aa16.13■□□□□ 0.17
PITX2-213ENST00000616641 SUPT6HQ7KZ85 1726 aaKnown RBP16.12■□□□□ 0.17
PITX2-213ENST00000616641 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.12■□□□□ 0.17
PITX2-213ENST00000616641 SLC4A1APQ9BWU0 796 aaKnown RBP16.12■□□□□ 0.17
PITX2-213ENST00000616641 CDK11AQ9UQ88 783 aaPredicted RBP16.12■□□□□ 0.17
PITX2-213ENST00000616641 IQGAP2Q13576 1575 aa16.12■□□□□ 0.17
PITX2-213ENST00000616641 EPRSP07814 1512 aaKnown RBP16.12■□□□□ 0.17
PITX2-213ENST00000616641 CFDP1Q9UEE9 299 aaPredicted RBP16.11■□□□□ 0.17
PITX2-213ENST00000616641 EHBP1L1Q8N3D4 1523 aa16.11■□□□□ 0.17
PITX2-213ENST00000616641 PTPN23Q9H3S7 1636 aa16.11■□□□□ 0.17
PITX2-213ENST00000616641 HSPA5P11021 654 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms