RNA–Protein interactions for RNA: ENST00000616568.4

PHF19-214, Transcript of PHD finger protein 19, humanhuman

TSL 1 (best) BASIC

Gene PHF19, Length 4,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF19-214ENST00000616568 TSPY4P0CV99 314 aa13.93□□□□□ -0.18
PHF19-214ENST00000616568 TSPY10P0CW01 314 aa13.93□□□□□ -0.18
PHF19-214ENST00000616568 RAD54L2Q9Y4B4 1467 aa13.93□□□□□ -0.18
PHF19-214ENST00000616568 IGF1RP08069 1367 aa13.92□□□□□ -0.18
PHF19-214ENST00000616568 HMGXB3Q12766 1538 aa13.91□□□□□ -0.18
PHF19-214ENST00000616568 NEFLP07196 543 aa13.91□□□□□ -0.18
PHF19-214ENST00000616568 TONSLQ96HA7 1378 aa13.9□□□□□ -0.18
PHF19-214ENST00000616568 SYNJ1O43426 1573 aa13.9□□□□□ -0.18
PHF19-214ENST00000616568 CFDP1Q9UEE9 299 aaPredicted RBP13.89□□□□□ -0.19
PHF19-214ENST00000616568 CCNB3Q8WWL7 1395 aa13.88□□□□□ -0.19
PHF19-214ENST00000616568 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.88□□□□□ -0.193e-10■■■□□ 16.2
PHF19-214ENST00000616568 FHOD3Q2V2M9 1422 aa13.87□□□□□ -0.19
PHF19-214ENST00000616568 SLC4A1APQ9BWU0 796 aaKnown RBP13.84□□□□□ -0.19
PHF19-214ENST00000616568 ANP32CO43423 234 aa13.82□□□□□ -0.2
PHF19-214ENST00000616568 HIRIP3Q9BW71 556 aaPredicted RBP13.8□□□□□ -0.2
PHF19-214ENST00000616568 SCAF1Q9H7N4 1312 aaKnown RBP13.8□□□□□ -0.2
PHF19-214ENST00000616568 FMN1Q68DA7 1419 aa13.8□□□□□ -0.2
PHF19-214ENST00000616568 GAPVD1Q14C86 1478 aa13.8□□□□□ -0.2
PHF19-214ENST00000616568 CUX1P39880 1505 aa13.79□□□□□ -0.2
PHF19-214ENST00000616568 PEG3Q9GZU2 1588 aa13.79□□□□□ -0.2
PHF19-214ENST00000616568 DDX10Q13206 875 aaKnown RBP13.78□□□□□ -0.2
PHF19-214ENST00000616568 JPH4Q96JJ6 628 aa13.78□□□□□ -0.2
PHF19-214ENST00000616568 AQRO60306 1485 aaKnown RBP eCLIP13.77□□□□□ -0.21e-7■■■■□ 26
PHF19-214ENST00000616568 SIN3AQ96ST3 1273 aa13.77□□□□□ -0.2
PHF19-214ENST00000616568 CARMIL2Q6F5E8 1435 aa13.75□□□□□ -0.21
PHF19-214ENST00000616568 CHGAP10645 457 aaKnown RBP13.75□□□□□ -0.21
PHF19-214ENST00000616568 KDM2AQ9Y2K7 1162 aa13.74□□□□□ -0.21
PHF19-214ENST00000616568 TOP2BQ02880 1626 aa13.74□□□□□ -0.21
PHF19-214ENST00000616568 ARHGAP35Q9NRY4 1499 aa13.73□□□□□ -0.21
PHF19-214ENST00000616568 TOPBP1Q92547 1522 aa13.72□□□□□ -0.21
PHF19-214ENST00000616568 POLA1P09884 1462 aaPredicted RBP13.71□□□□□ -0.22
PHF19-214ENST00000616568 PRXQ9BXM0 1461 aa13.68□□□□□ -0.22
PHF19-214ENST00000616568 KIF21BO75037 1637 aa13.67□□□□□ -0.22
PHF19-214ENST00000616568 MIER1Q8N108 512 aa13.66□□□□□ -0.22
PHF19-214ENST00000616568 SETD5Q9C0A6 1442 aa13.66□□□□□ -0.22
PHF19-214ENST00000616568 RGL3Q3MIN7 710 aa13.65□□□□□ -0.22
PHF19-214ENST00000616568 GTF3C3Q9Y5Q9 886 aa13.65□□□□□ -0.22
PHF19-214ENST00000616568 RAB3GAP2Q9H2M9 1393 aa13.64□□□□□ -0.23
PHF19-214ENST00000616568 ESF1Q9H501 851 aaKnown RBP13.64□□□□□ -0.23
PHF19-214ENST00000616568 CLSPNQ9HAW4 1339 aa13.64□□□□□ -0.23
PHF19-214ENST00000616568 ARAP1Q96P48 1450 aa13.64□□□□□ -0.23
PHF19-214ENST00000616568 BCANQ96GW7 911 aa13.64□□□□□ -0.23
PHF19-214ENST00000616568 PLPPR3Q6T4P5 718 aa13.63□□□□□ -0.23
PHF19-214ENST00000616568 MRC2Q9UBG0 1479 aa13.62□□□□□ -0.23
PHF19-214ENST00000616568 ERICH3Q5RHP9 1530 aa13.62□□□□□ -0.23
PHF19-214ENST00000616568 FOXD1Q16676 465 aa13.61□□□□□ -0.23
PHF19-214ENST00000616568 STAG3Q9UJ98 1225 aa13.61□□□□□ -0.23
PHF19-214ENST00000616568 EIF4G2P78344 907 aaKnown RBP eCLIP13.6□□□□□ -0.233e-8■■■■■ 29.4
PHF19-214ENST00000616568 DNMBPQ6XZF7 1577 aa13.59□□□□□ -0.23
PHF19-214ENST00000616568 GRIN2BQ13224 1484 aa13.59□□□□□ -0.23
PHF19-214ENST00000616568 ACIN1Q9UKV3 1341 aaKnown RBP13.59□□□□□ -0.23
PHF19-214ENST00000616568 SENP3Q9H4L4 574 aaPredicted RBP13.58□□□□□ -0.24
PHF19-214ENST00000616568 LAMC3Q9Y6N6 1575 aa13.56□□□□□ -0.24
PHF19-214ENST00000616568 PTPRGP23470 1445 aa13.56□□□□□ -0.24
PHF19-214ENST00000616568 HNRNPMP52272 730 aaKnown RBP eCLIP13.55□□□□□ -0.24
PHF19-214ENST00000616568 CCDC18Q5T9S5 1454 aa13.54□□□□□ -0.24
PHF19-214ENST00000616568 ABCA10Q8WWZ4 1543 aa13.53□□□□□ -0.24
PHF19-214ENST00000616568 IFT140Q96RY7 1462 aa13.53□□□□□ -0.24
PHF19-214ENST00000616568 PHLDB1Q86UU1 1377 aa13.52□□□□□ -0.24
PHF19-214ENST00000616568 EFCAB2Q5VUJ9 269 aa13.52□□□□□ -0.25
PHF19-214ENST00000616568 MPHOSPH9Q99550 1183 aa13.52□□□□□ -0.25
PHF19-214ENST00000616568 URB2Q14146 1524 aaKnown RBP13.51□□□□□ -0.25
PHF19-214ENST00000616568 PKD2Q13563 968 aa13.51□□□□□ -0.25
PHF19-214ENST00000616568 FAM9BQ8IZU0 186 aa13.51□□□□□ -0.25
PHF19-214ENST00000616568 HNRNPUQ00839 825 aaKnown RBP eCLIP13.49□□□□□ -0.25
PHF19-214ENST00000616568 LRRC9Q6ZRR7 1453 aa13.49□□□□□ -0.25
PHF19-214ENST00000616568 DHX57Q6P158 1386 aaKnown RBP13.49□□□□□ -0.25
PHF19-214ENST00000616568 ZNF644Q9H582 1327 aaPredicted RBP13.48□□□□□ -0.25
PHF19-214ENST00000616568 CASKIN1Q8WXD9 1431 aa13.48□□□□□ -0.25
PHF19-214ENST00000616568 CARD11Q9BXL7 1154 aa13.47□□□□□ -0.25
PHF19-214ENST00000616568 TIMELESSQ9UNS1 1208 aa13.47□□□□□ -0.25
PHF19-214ENST00000616568 SNAPC4Q5SXM2 1469 aa13.47□□□□□ -0.25
PHF19-214ENST00000616568 NUP155O75694 1391 aa13.46□□□□□ -0.25
PHF19-214ENST00000616568 OSCARQ8IYS5 282 aa13.46□□□□□ -0.25
PHF19-214ENST00000616568 DCAF11Q8TEB1 546 aa13.46□□□□□ -0.25
PHF19-214ENST00000616568 ANKRD30AQ9BXX3 1397 aa13.46□□□□□ -0.25
PHF19-214ENST00000616568 ERICH6Q7L0X2 663 aa13.46□□□□□ -0.25
PHF19-214ENST00000616568 MRS2Q9HD23 443 aa13.44□□□□□ -0.26
PHF19-214ENST00000616568 BIVM-ERCC5R4GMW8 1640 aa13.44□□□□□ -0.26
PHF19-214ENST00000616568 FGD6Q6ZV73 1430 aa13.43□□□□□ -0.26
PHF19-214ENST00000616568 GGT6Q6P531 493 aa13.43□□□□□ -0.26
PHF19-214ENST00000616568 TMC1Q8TDI8 760 aa13.43□□□□□ -0.26
PHF19-214ENST00000616568 SALL2Q9Y467 1007 aaPredicted RBP13.43□□□□□ -0.26
PHF19-214ENST00000616568 ARID4BQ4LE39 1312 aaPredicted RBP13.42□□□□□ -0.26
PHF19-214ENST00000616568 PPP1R15AO75807 674 aaPredicted RBP13.42□□□□□ -0.26
PHF19-214ENST00000616568 CYB5RLQ6IPT4 315 aa13.41□□□□□ -0.26
PHF19-214ENST00000616568 ZNF608Q9ULD9 1512 aaPredicted RBP13.41□□□□□ -0.26
PHF19-214ENST00000616568 MYOM3Q5VTT5 1437 aa13.41□□□□□ -0.26
PHF19-214ENST00000616568 FYCO1Q9BQS8 1478 aa13.4□□□□□ -0.26
PHF19-214ENST00000616568 PRG4Q92954 1404 aaPredicted RBP13.39□□□□□ -0.27
PHF19-214ENST00000616568 NCOA2Q15596 1464 aa13.39□□□□□ -0.27
PHF19-214ENST00000616568 L3MBTL2Q969R5 705 aa13.39□□□□□ -0.27
PHF19-214ENST00000616568 MLECQ14165 292 aa13.38□□□□□ -0.27
PHF19-214ENST00000616568 RSPH4AQ5TD94 716 aa13.38□□□□□ -0.27
PHF19-214ENST00000616568 SPAG9O60271 1321 aaKnown RBP13.38□□□□□ -0.27
PHF19-214ENST00000616568 EFCAB5A4FU69 1503 aa13.38□□□□□ -0.27
PHF19-214ENST00000616568 PRDM2Q13029 1718 aa13.38□□□□□ -0.27
PHF19-214ENST00000616568 KIF3BO15066 747 aa13.38□□□□□ -0.27
PHF19-214ENST00000616568 TRHP20396 242 aaPredicted RBP13.37□□□□□ -0.27
PHF19-214ENST00000616568 HSPA5P11021 654 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms