RNA–Protein interactions for RNA: ENST00000616003.4

MID1-212, Transcript of midline 1, humanhuman

TSL 1 (best) BASIC

Gene MID1, Length 1,926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MID1-212ENST00000616003 ATAD2BQ9ULI0 1458 aa11.4□□□□□ -0.58
MID1-212ENST00000616003 ARAP1Q96P48 1450 aa11.39□□□□□ -0.59
MID1-212ENST00000616003 RRBP1Q9P2E9 1410 aaKnown RBP11.37□□□□□ -0.59
MID1-212ENST00000616003 PRXQ9BXM0 1461 aa11.37□□□□□ -0.59
MID1-212ENST00000616003 PKNOX2Q96KN3 472 aa11.31□□□□□ -0.6
MID1-212ENST00000616003 PDIA4P13667 645 aaKnown RBP11.3□□□□□ -0.6
MID1-212ENST00000616003 ANP32EQ9BTT0 268 aa11.3□□□□□ -0.6
MID1-212ENST00000616003 SUPT16HQ9Y5B9 1047 aaKnown RBP11.3□□□□□ -0.6
MID1-212ENST00000616003 HMGXB3Q12766 1538 aa11.25□□□□□ -0.61
MID1-212ENST00000616003 CCNB3Q8WWL7 1395 aa11.25□□□□□ -0.61
MID1-212ENST00000616003 CUX1P39880 1505 aa11.24□□□□□ -0.61
MID1-212ENST00000616003 MAP3K1Q13233 1512 aa11.24□□□□□ -0.61
MID1-212ENST00000616003 NEFLP07196 543 aa11.24□□□□□ -0.61
MID1-212ENST00000616003 MAPKBP1O60336 1514 aa11.24□□□□□ -0.61
MID1-212ENST00000616003 KIF27Q86VH2 1401 aa11.23□□□□□ -0.61
MID1-212ENST00000616003 ARHGAP35Q9NRY4 1499 aa11.23□□□□□ -0.61
MID1-212ENST00000616003 FOXD1Q16676 465 aa11.23□□□□□ -0.61
MID1-212ENST00000616003 PABPN1Q86U42 306 aaKnown RBP eCLIP11.23□□□□□ -0.61
MID1-212ENST00000616003 TIAM1Q13009 1591 aa11.21□□□□□ -0.61
MID1-212ENST00000616003 PRDM2Q13029 1718 aa11.21□□□□□ -0.62
MID1-212ENST00000616003 KANK4Q5T7N3 995 aaPredicted RBP11.2□□□□□ -0.62
MID1-212ENST00000616003 TAOK2Q9UL54 1235 aa11.2□□□□□ -0.62
MID1-212ENST00000616003 ANO8Q9HCE9 1232 aaPredicted RBP11.19□□□□□ -0.62
MID1-212ENST00000616003 CFAP43Q8NDM7 1665 aa11.19□□□□□ -0.62
MID1-212ENST00000616003 PDE4CQ08493 712 aa11.19□□□□□ -0.62
MID1-212ENST00000616003 NPM2Q86SE8 214 aaKnown RBP11.17□□□□□ -0.62
MID1-212ENST00000616003 TSHZ2Q9NRE2 1034 aa11.17□□□□□ -0.62
MID1-212ENST00000616003 PLSCR2Q9NRY7 297 aa11.17□□□□□ -0.62
MID1-212ENST00000616003 RAB3GAP2Q9H2M9 1393 aa11.16□□□□□ -0.62
MID1-212ENST00000616003 NCAPD3P42695 1498 aa11.14□□□□□ -0.63
MID1-212ENST00000616003 CFTRP13569 1480 aa11.13□□□□□ -0.63
MID1-212ENST00000616003 LRRC9Q6ZRR7 1453 aa11.12□□□□□ -0.63
MID1-212ENST00000616003 SETD5Q9C0A6 1442 aa11.12□□□□□ -0.63
MID1-212ENST00000616003 WDR97A6NE52 1622 aa11.11□□□□□ -0.63
MID1-212ENST00000616003 KCNA4P22459 653 aa11.1□□□□□ -0.63
MID1-212ENST00000616003 PCF11O94913 1555 aaKnown RBP11.09□□□□□ -0.63
MID1-212ENST00000616003 FHAD1B1AJZ9 1412 aa11.08□□□□□ -0.64
MID1-212ENST00000616003 PHLDB1Q86UU1 1377 aa11.06□□□□□ -0.64
MID1-212ENST00000616003 FYCO1Q9BQS8 1478 aa11.04□□□□□ -0.64
MID1-212ENST00000616003 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.04□□□□□ -0.64
MID1-212ENST00000616003 EFCAB5A4FU69 1503 aa11.04□□□□□ -0.64
MID1-212ENST00000616003 C14orf37Q86TY3 774 aa11.03□□□□□ -0.64
MID1-212ENST00000616003 TAF7LQ5H9L4 462 aa11.03□□□□□ -0.64
MID1-212ENST00000616003 KCNH8Q96L42 1107 aa11.03□□□□□ -0.64
MID1-212ENST00000616003 CCER2I3L3R5 266 aa11.02□□□□□ -0.65
MID1-212ENST00000616003 TPRNQ4KMQ1 711 aa11.02□□□□□ -0.65
MID1-212ENST00000616003 IGF1RP08069 1367 aa11.02□□□□□ -0.65
MID1-212ENST00000616003 PPP1R15AO75807 674 aaPredicted RBP11.01□□□□□ -0.65
MID1-212ENST00000616003 AQRO60306 1485 aaKnown RBP eCLIP11.01□□□□□ -0.65
MID1-212ENST00000616003 ITGAEP38570 1179 aa11.01□□□□□ -0.65
MID1-212ENST00000616003 FKBP8Q14318 412 aa10.99□□□□□ -0.65
MID1-212ENST00000616003 CARMIL1Q5VZK9 1371 aa10.99□□□□□ -0.65
MID1-212ENST00000616003 FGD5Q6ZNL6 1462 aa10.99□□□□□ -0.65
MID1-212ENST00000616003 BCANQ96GW7 911 aa10.97□□□□□ -0.65
MID1-212ENST00000616003 CTTNBP2Q8WZ74 1663 aa10.97□□□□□ -0.65
MID1-212ENST00000616003 DDX10Q13206 875 aaKnown RBP10.97□□□□□ -0.65
MID1-212ENST00000616003 FBXO3Q9UK99 471 aa10.97□□□□□ -0.65
MID1-212ENST00000616003 CC2D2AQ9P2K1 1620 aa10.97□□□□□ -0.65
MID1-212ENST00000616003 CASKIN1Q8WXD9 1431 aa10.96□□□□□ -0.65
MID1-212ENST00000616003 CUL7Q14999 1698 aa10.96□□□□□ -0.65
MID1-212ENST00000616003 FGD1P98174 961 aa10.95□□□□□ -0.66
MID1-212ENST00000616003 CCDC18Q5T9S5 1454 aa10.95□□□□□ -0.66
MID1-212ENST00000616003 PTPN23Q9H3S7 1636 aa10.94□□□□□ -0.66
MID1-212ENST00000616003 ANP32CO43423 234 aa10.94□□□□□ -0.66
MID1-212ENST00000616003 CHMP4AQ9BY43 222 aa10.94□□□□□ -0.66
MID1-212ENST00000616003 HFM1A2PYH4 1435 aa10.93□□□□□ -0.66
MID1-212ENST00000616003 FGD6Q6ZV73 1430 aa10.93□□□□□ -0.66
MID1-212ENST00000616003 FAM50AQ14320 339 aaKnown RBP10.93□□□□□ -0.66
MID1-212ENST00000616003 ERICH6BQ5W0A0 696 aa10.93□□□□□ -0.66
MID1-212ENST00000616003 SIN3AQ96ST3 1273 aa10.93□□□□□ -0.66
MID1-212ENST00000616003 BCL11BQ9C0K0 894 aaPredicted RBP10.93□□□□□ -0.66
MID1-212ENST00000616003 UACAQ9BZF9 1416 aa10.93□□□□□ -0.66
MID1-212ENST00000616003 THOC2Q8NI27 1593 aaKnown RBP10.93□□□□□ -0.66
MID1-212ENST00000616003 RBM19Q9Y4C8 960 aaKnown RBP10.92□□□□□ -0.66
MID1-212ENST00000616003 TONSLQ96HA7 1378 aa10.91□□□□□ -0.66
MID1-212ENST00000616003 SNAPC4Q5SXM2 1469 aa10.91□□□□□ -0.66
MID1-212ENST00000616003 FHOD3Q2V2M9 1422 aa10.91□□□□□ -0.66
MID1-212ENST00000616003 KDM5BQ9UGL1 1544 aa10.91□□□□□ -0.66
MID1-212ENST00000616003 BRD2P25440 801 aaKnown RBP10.9□□□□□ -0.66
MID1-212ENST00000616003 CADPSQ9ULU8 1353 aa10.9□□□□□ -0.66
MID1-212ENST00000616003 KIF21AQ7Z4S6 1674 aa10.9□□□□□ -0.66
MID1-212ENST00000616003 ABCA10Q8WWZ4 1543 aa10.9□□□□□ -0.66
MID1-212ENST00000616003 DNMBPQ6XZF7 1577 aa10.9□□□□□ -0.67
MID1-212ENST00000616003 HECW1Q76N89 1606 aa10.89□□□□□ -0.67
MID1-212ENST00000616003 FMN1Q68DA7 1419 aa10.89□□□□□ -0.67
MID1-212ENST00000616003 GCC2Q8IWJ2 1684 aa10.89□□□□□ -0.67
MID1-212ENST00000616003 HAP1P54257 671 aaPredicted RBP10.88□□□□□ -0.67
MID1-212ENST00000616003 SAMD9Q5K651 1589 aa10.88□□□□□ -0.67
MID1-212ENST00000616003 EHBP1L1Q8N3D4 1523 aa10.87□□□□□ -0.67
MID1-212ENST00000616003 TRIM52Q96A61 297 aa10.87□□□□□ -0.67
MID1-212ENST00000616003 SUPT6HQ7KZ85 1726 aaKnown RBP10.86□□□□□ -0.67
MID1-212ENST00000616003 NCOA2Q15596 1464 aa10.86□□□□□ -0.67
MID1-212ENST00000616003 LRRIQ1Q96JM4 1722 aa10.86□□□□□ -0.67
MID1-212ENST00000616003 FANCIQ9NVI1 1328 aa10.85□□□□□ -0.67
MID1-212ENST00000616003 NAIPQ13075 1403 aa10.85□□□□□ -0.67
MID1-212ENST00000616003 SALL2Q9Y467 1007 aaPredicted RBP10.85□□□□□ -0.67
MID1-212ENST00000616003 MYOM3Q5VTT5 1437 aa10.84□□□□□ -0.67
MID1-212ENST00000616003 AKNAQ7Z591 1439 aa10.83□□□□□ -0.68
MID1-212ENST00000616003 FANCD2Q9BXW9 1451 aa10.83□□□□□ -0.68
MID1-212ENST00000616003 SAMD1Q6SPF0 538 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms