RNA–Protein interactions for RNA: ENST00000615842.1

U1.27-201, humanhuman

BASIC

Gene U1, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.27-201ENST00000615842 CTTNBP2Q8WZ74 1663 aa14.01□□□□□ -0.17
U1.27-201ENST00000615842 KIAA0586Q9BVV6 1533 aa14□□□□□ -0.17
U1.27-201ENST00000615842 NUP160Q12769 1436 aa13.98□□□□□ -0.17
U1.27-201ENST00000615842 EFCAB5A4FU69 1503 aa13.97□□□□□ -0.17
U1.27-201ENST00000615842 IQGAP2Q13576 1575 aa13.96□□□□□ -0.17
U1.27-201ENST00000615842 RANGAP1P46060 587 aaPredicted RBP13.96□□□□□ -0.17
U1.27-201ENST00000615842 ARHGAP35Q9NRY4 1499 aa13.93□□□□□ -0.18
U1.27-201ENST00000615842 CEP170Q5SW79 1584 aa13.92□□□□□ -0.18
U1.27-201ENST00000615842 VPS8Q8N3P4 1428 aa13.91□□□□□ -0.18
U1.27-201ENST00000615842 UGGT2Q9NYU1 1516 aa13.91□□□□□ -0.18
U1.27-201ENST00000615842 CHD1O14646 1710 aa13.9□□□□□ -0.18
U1.27-201ENST00000615842 ARAP1Q96P48 1450 aa13.89□□□□□ -0.19
U1.27-201ENST00000615842 SAMD9Q5K651 1589 aa13.88□□□□□ -0.19
U1.27-201ENST00000615842 JPH4Q96JJ6 628 aa13.88□□□□□ -0.19
U1.27-201ENST00000615842 CARMIL2Q6F5E8 1435 aa13.87□□□□□ -0.19
U1.27-201ENST00000615842 FMN1Q68DA7 1419 aa13.86□□□□□ -0.19
U1.27-201ENST00000615842 APLP2Q06481 763 aa13.85□□□□□ -0.19
U1.27-201ENST00000615842 P3H3Q8IVL6 736 aa13.84□□□□□ -0.19
U1.27-201ENST00000615842 FHOD3Q2V2M9 1422 aa13.82□□□□□ -0.2
U1.27-201ENST00000615842 OSCARQ8IYS5 282 aa13.82□□□□□ -0.2
U1.27-201ENST00000615842 DISP1Q96F81 1524 aa13.81□□□□□ -0.2
U1.27-201ENST00000615842 CLASP1Q7Z460 1538 aa13.8□□□□□ -0.2
U1.27-201ENST00000615842 KIAA0556O60303 1618 aa13.8□□□□□ -0.2
U1.27-201ENST00000615842 SHROOM2Q13796 1616 aa13.79□□□□□ -0.2
U1.27-201ENST00000615842 CASKIN1Q8WXD9 1431 aa13.78□□□□□ -0.2
U1.27-201ENST00000615842 PRG4Q92954 1404 aaPredicted RBP13.78□□□□□ -0.2
U1.27-201ENST00000615842 FYCO1Q9BQS8 1478 aa13.77□□□□□ -0.21
U1.27-201ENST00000615842 MAP3K1Q13233 1512 aa13.75□□□□□ -0.21
U1.27-201ENST00000615842 PCF11O94913 1555 aaKnown RBP13.71□□□□□ -0.21
U1.27-201ENST00000615842 ATP1B4Q9UN42 357 aaPredicted RBP13.71□□□□□ -0.21
U1.27-201ENST00000615842 PTPRGP23470 1445 aa13.71□□□□□ -0.22
U1.27-201ENST00000615842 HECW1Q76N89 1606 aa13.69□□□□□ -0.22
U1.27-201ENST00000615842 CCDC18Q5T9S5 1454 aa13.68□□□□□ -0.22
U1.27-201ENST00000615842 TIAM1Q13009 1591 aa13.66□□□□□ -0.22
U1.27-201ENST00000615842 RAPGEF6Q8TEU7 1601 aa13.65□□□□□ -0.22
U1.27-201ENST00000615842 TRIM26Q12899 539 aaPredicted RBP13.65□□□□□ -0.22
U1.27-201ENST00000615842 TTBK1Q5TCY1 1321 aaPredicted RBP13.64□□□□□ -0.23
U1.27-201ENST00000615842 CDK11AQ9UQ88 783 aaPredicted RBP13.64□□□□□ -0.23
U1.27-201ENST00000615842 ABCA8O94911 1581 aa13.63□□□□□ -0.23
U1.27-201ENST00000615842 EPRSP07814 1512 aaKnown RBP13.63□□□□□ -0.23
U1.27-201ENST00000615842 UACAQ9BZF9 1416 aa13.63□□□□□ -0.23
U1.27-201ENST00000615842 CFAP43Q8NDM7 1665 aa13.63□□□□□ -0.23
U1.27-201ENST00000615842 LRRC9Q6ZRR7 1453 aa13.62□□□□□ -0.23
U1.27-201ENST00000615842 PPARGC1BQ86YN6 1023 aaKnown RBP13.62□□□□□ -0.23
U1.27-201ENST00000615842 PLB1Q6P1J6 1458 aa13.61□□□□□ -0.23
U1.27-201ENST00000615842 ERCC6L2Q5T890 1561 aa13.61□□□□□ -0.23
U1.27-201ENST00000615842 NUP153P49790 1475 aaKnown RBP13.61□□□□□ -0.23
U1.27-201ENST00000615842 MTUS2Q5JR59 1369 aa13.6□□□□□ -0.23
U1.27-201ENST00000615842 KANK4Q5T7N3 995 aaPredicted RBP13.6□□□□□ -0.23
U1.27-201ENST00000615842 UHRF1BP1LA0JNW5 1464 aa13.58□□□□□ -0.24
U1.27-201ENST00000615842 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.57□□□□□ -0.24
U1.27-201ENST00000615842 HNRNPUL2Q1KMD3 747 aaKnown RBP13.57□□□□□ -0.24
U1.27-201ENST00000615842 ABCC2Q92887 1545 aa13.57□□□□□ -0.24
U1.27-201ENST00000615842 EHBP1L1Q8N3D4 1523 aa13.56□□□□□ -0.24
U1.27-201ENST00000615842 CDK13Q14004 1512 aaKnown RBP13.54□□□□□ -0.24
U1.27-201ENST00000615842 PLEKHD1A6NEE1 506 aa13.54□□□□□ -0.24
U1.27-201ENST00000615842 ATP10BO94823 1461 aa13.54□□□□□ -0.24
U1.27-201ENST00000615842 LRRIQ1Q96JM4 1722 aa13.53□□□□□ -0.24
U1.27-201ENST00000615842 ARHGEF11O15085 1522 aa13.51□□□□□ -0.25
U1.27-201ENST00000615842 TROQ12816 1431 aaPredicted RBP13.51□□□□□ -0.25
U1.27-201ENST00000615842 ARID3CA6NKF2 412 aa13.51□□□□□ -0.25
U1.27-201ENST00000615842 PCGF6Q9BYE7 350 aa13.51□□□□□ -0.25
U1.27-201ENST00000615842 SUPT6HQ7KZ85 1726 aaKnown RBP13.5□□□□□ -0.25
U1.27-201ENST00000615842 KDM5BQ9UGL1 1544 aa13.49□□□□□ -0.25
U1.27-201ENST00000615842 NPM1P06748 294 aaKnown RBP eCLIP13.48□□□□□ -0.25
U1.27-201ENST00000615842 MAGI3Q5TCQ9 1506 aa13.47□□□□□ -0.25
U1.27-201ENST00000615842 NCOA2Q15596 1464 aa13.47□□□□□ -0.25
U1.27-201ENST00000615842 RRBP1Q9P2E9 1410 aaKnown RBP13.47□□□□□ -0.25
U1.27-201ENST00000615842 ADCY10Q96PN6 1610 aa13.45□□□□□ -0.26
U1.27-201ENST00000615842 PHLDB1Q86UU1 1377 aa13.45□□□□□ -0.26
U1.27-201ENST00000615842 CCNB3Q8WWL7 1395 aa13.45□□□□□ -0.26
U1.27-201ENST00000615842 RIMBP3CA6NJZ7 1639 aa13.44□□□□□ -0.26
U1.27-201ENST00000615842 RIMBP3BA6NNM3 1639 aa13.44□□□□□ -0.26
U1.27-201ENST00000615842 RIMBP3Q9UFD9 1639 aa13.44□□□□□ -0.26
U1.27-201ENST00000615842 MYOM3Q5VTT5 1437 aa13.44□□□□□ -0.26
U1.27-201ENST00000615842 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.44□□□□□ -0.26
U1.27-201ENST00000615842 ZCCHC11Q5TAX3 1644 aaKnown RBP13.43□□□□□ -0.26
U1.27-201ENST00000615842 MIA2Q96PC5 1412 aa13.42□□□□□ -0.26
U1.27-201ENST00000615842 KIF14Q15058 1648 aa13.42□□□□□ -0.26
U1.27-201ENST00000615842 FGD6Q6ZV73 1430 aa13.4□□□□□ -0.26
U1.27-201ENST00000615842 CYB5RLQ6IPT4 315 aa13.4□□□□□ -0.26
U1.27-201ENST00000615842 WDR7Q9Y4E6 1490 aa13.37□□□□□ -0.27
U1.27-201ENST00000615842 ABCC10Q5T3U5 1492 aa13.36□□□□□ -0.27
U1.27-201ENST00000615842 FAM50AQ14320 339 aaKnown RBP13.36□□□□□ -0.27
U1.27-201ENST00000615842 ITSN2Q9NZM3 1697 aa13.36□□□□□ -0.27
U1.27-201ENST00000615842 GPATCH8Q9UKJ3 1502 aaKnown RBP13.35□□□□□ -0.27
U1.27-201ENST00000615842 CFDP1Q9UEE9 299 aaPredicted RBP13.35□□□□□ -0.27
U1.27-201ENST00000615842 ASXL2Q76L83 1435 aa13.35□□□□□ -0.27
U1.27-201ENST00000615842 TCOF1Q13428 1488 aaKnown RBP13.35□□□□□ -0.27
U1.27-201ENST00000615842 KCNH8Q96L42 1107 aa13.34□□□□□ -0.27
U1.27-201ENST00000615842 PTPN23Q9H3S7 1636 aa13.33□□□□□ -0.28
U1.27-201ENST00000615842 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.32□□□□□ -0.28not detected■■■■■ 78.8
U1.27-201ENST00000615842 MAPKBP1O60336 1514 aa13.31□□□□□ -0.28
U1.27-201ENST00000615842 RSPH4AQ5TD94 716 aa13.29□□□□□ -0.28
U1.27-201ENST00000615842 PLCH2O75038 1416 aa13.29□□□□□ -0.28
U1.27-201ENST00000615842 ARAP3Q8WWN8 1544 aa13.29□□□□□ -0.28
U1.27-201ENST00000615842 EFCAB2Q5VUJ9 269 aa13.28□□□□□ -0.28
U1.27-201ENST00000615842 PLEKHH2Q8IVE3 1493 aa13.27□□□□□ -0.29
U1.27-201ENST00000615842 PREX2Q70Z35 1606 aa13.27□□□□□ -0.29
U1.27-201ENST00000615842 CDC42BPAQ5VT25 1732 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms