RNA–Protein interactions for RNA: ENST00000615310.4

RET-205, Transcript of ret proto-oncogene, humanhuman

TSL 5 BASIC

Gene RET, Length 4,337 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-205ENST00000615310 RAPGEF2Q9Y4G8 1499 aa19.56■□□□□ 0.72
RET-205ENST00000615310 SMARCA2P51531 1590 aa19.56■□□□□ 0.72
RET-205ENST00000615310 SALL2Q9Y467 1007 aaPredicted RBP19.53■□□□□ 0.72
RET-205ENST00000615310 TSPY4P0CV99 314 aa19.51■□□□□ 0.71
RET-205ENST00000615310 TSPY10P0CW01 314 aa19.51■□□□□ 0.71
RET-205ENST00000615310 IRX6P78412 446 aaPredicted RBP19.51■□□□□ 0.71
RET-205ENST00000615310 CLSPNQ9HAW4 1339 aa19.5■□□□□ 0.71
RET-205ENST00000615310 MRS2Q9HD23 443 aa19.49■□□□□ 0.71
RET-205ENST00000615310 EIF4G2P78344 907 aaKnown RBP eCLIP19.49■□□□□ 0.71
RET-205ENST00000615310 SENP3-EIF4A1A0A087X0R7 540 aa19.47■□□□□ 0.71
RET-205ENST00000615310 TDRD9Q8NDG6 1382 aaKnown RBP19.44■□□□□ 0.7
RET-205ENST00000615310 FHAD1B1AJZ9 1412 aa19.43■□□□□ 0.7
RET-205ENST00000615310 CFDP1Q9UEE9 299 aaPredicted RBP19.42■□□□□ 0.7
RET-205ENST00000615310 CHGAP10645 457 aaKnown RBP19.4■□□□□ 0.7
RET-205ENST00000615310 TMC1Q8TDI8 760 aa19.39■□□□□ 0.7
RET-205ENST00000615310 KCNH8Q96L42 1107 aa19.39■□□□□ 0.7
RET-205ENST00000615310 PLEKHD1A6NEE1 506 aa19.39■□□□□ 0.69
RET-205ENST00000615310 RAB3GAP2Q9H2M9 1393 aa19.37■□□□□ 0.69
RET-205ENST00000615310 RGL3Q3MIN7 710 aa19.36■□□□□ 0.69
RET-205ENST00000615310 CADPSQ9ULU8 1353 aa19.36■□□□□ 0.69
RET-205ENST00000615310 RTL5Q5HYW3 569 aaPredicted RBP19.36■□□□□ 0.69
RET-205ENST00000615310 SETD5Q9C0A6 1442 aa19.34■□□□□ 0.69
RET-205ENST00000615310 EIF4G1Q04637 1599 aaKnown RBP19.33■□□□□ 0.68
RET-205ENST00000615310 FOXD1Q16676 465 aa19.31■□□□□ 0.68
RET-205ENST00000615310 FHOD3Q2V2M9 1422 aa19.29■□□□□ 0.68
RET-205ENST00000615310 NPM2Q86SE8 214 aaKnown RBP19.27■□□□□ 0.68
RET-205ENST00000615310 SUPT16HQ9Y5B9 1047 aaKnown RBP19.26■□□□□ 0.67
RET-205ENST00000615310 CANXP27824 592 aaKnown RBP19.24■□□□□ 0.67
RET-205ENST00000615310 ARHGAP35Q9NRY4 1499 aa19.24■□□□□ 0.67
RET-205ENST00000615310 BCL11AQ9H165 835 aa19.23■□□□□ 0.67
RET-205ENST00000615310 SENP3Q9H4L4 574 aaPredicted RBP19.22■□□□□ 0.67
RET-205ENST00000615310 DHX57Q6P158 1386 aaKnown RBP19.22■□□□□ 0.67
RET-205ENST00000615310 CCDC136Q96JN2 1154 aa19.21■□□□□ 0.67
RET-205ENST00000615310 NPM1P06748 294 aaKnown RBP eCLIP19.2■□□□□ 0.66
RET-205ENST00000615310 CARD11Q9BXL7 1154 aa19.19■□□□□ 0.66
RET-205ENST00000615310 ERCC6Q03468 1493 aa19.17■□□□□ 0.66
RET-205ENST00000615310 TIMELESSQ9UNS1 1208 aa19.17■□□□□ 0.66
RET-205ENST00000615310 IGF1RP08069 1367 aa19.16■□□□□ 0.66
RET-205ENST00000615310 PPP1R15AO75807 674 aaPredicted RBP19.16■□□□□ 0.66
RET-205ENST00000615310 ANP32AP39687 249 aaKnown RBP19.16■□□□□ 0.66
RET-205ENST00000615310 HSPA5P11021 654 aaKnown RBP19.14■□□□□ 0.66
RET-205ENST00000615310 PDS5BQ9NTI5 1447 aa19.14■□□□□ 0.65
RET-205ENST00000615310 FMN1Q68DA7 1419 aa19.14■□□□□ 0.65
RET-205ENST00000615310 FANCD2Q9BXW9 1451 aa19.1■□□□□ 0.65
RET-205ENST00000615310 SYNJ1O43426 1573 aa19.09■□□□□ 0.65
RET-205ENST00000615310 MPHOSPH9Q99550 1183 aa19.09■□□□□ 0.65
RET-205ENST00000615310 WDR43Q15061 677 aaKnown RBP eCLIP19.07■□□□□ 0.64
RET-205ENST00000615310 KIF21BO75037 1637 aa19.07■□□□□ 0.64
RET-205ENST00000615310 DCAF11Q8TEB1 546 aa19.07■□□□□ 0.64
RET-205ENST00000615310 STAG3Q9UJ98 1225 aa19.07■□□□□ 0.64
RET-205ENST00000615310 PKD2Q13563 968 aa19.06■□□□□ 0.64
RET-205ENST00000615310 FGD5Q6ZNL6 1462 aa19.05■□□□□ 0.64
RET-205ENST00000615310 RAD54L2Q9Y4B4 1467 aa19.05■□□□□ 0.64
RET-205ENST00000615310 NCAPD3P42695 1498 aa19.04■□□□□ 0.64
RET-205ENST00000615310 L3MBTL2Q969R5 705 aa19.03■□□□□ 0.64
RET-205ENST00000615310 PLPPR3Q6T4P5 718 aa19.03■□□□□ 0.64
RET-205ENST00000615310 NEFMP07197 916 aa19.01■□□□□ 0.63
RET-205ENST00000615310 CCER2I3L3R5 266 aa19.01■□□□□ 0.63
RET-205ENST00000615310 SLC24A1O60721 1099 aa19■□□□□ 0.63
RET-205ENST00000615310 ARAP1Q96P48 1450 aa18.99■□□□□ 0.63
RET-205ENST00000615310 ANP32EQ9BTT0 268 aa18.98■□□□□ 0.63
RET-205ENST00000615310 NBR1Q14596 966 aa18.97■□□□□ 0.63
RET-205ENST00000615310 B4GALNT3Q6L9W6 998 aa18.96■□□□□ 0.63
RET-205ENST00000615310 PHLDB1Q86UU1 1377 aa18.96■□□□□ 0.63
RET-205ENST00000615310 CC2D1BQ5T0F9 858 aaKnown RBP18.96■□□□□ 0.63
RET-205ENST00000615310 ESF1Q9H501 851 aaKnown RBP18.96■□□□□ 0.63
RET-205ENST00000615310 KNSTRNQ9Y448 316 aa18.92■□□□□ 0.62
RET-205ENST00000615310 ZBTB47Q9UFB7 747 aaPredicted RBP18.91■□□□□ 0.62
RET-205ENST00000615310 NUP155O75694 1391 aa18.91■□□□□ 0.62
RET-205ENST00000615310 HNRNPMP52272 730 aaKnown RBP eCLIP18.9■□□□□ 0.62
RET-205ENST00000615310 JPH4Q96JJ6 628 aa18.89■□□□□ 0.62
RET-205ENST00000615310 PPP4R2Q9NY27 417 aa18.88■□□□□ 0.61
RET-205ENST00000615310 CFTRP13569 1480 aa18.88■□□□□ 0.61
RET-205ENST00000615310 PRXQ9BXM0 1461 aa18.87■□□□□ 0.61
RET-205ENST00000615310 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.86■□□□□ 0.61
RET-205ENST00000615310 CARMIL2Q6F5E8 1435 aa18.86■□□□□ 0.61
RET-205ENST00000615310 NEUROD2Q15784 382 aa18.84■□□□□ 0.61
RET-205ENST00000615310 TNNT2P45379 298 aaPredicted RBP18.83■□□□□ 0.61
RET-205ENST00000615310 GAPVD1Q14C86 1478 aa18.83■□□□□ 0.61
RET-205ENST00000615310 ZNF644Q9H582 1327 aaPredicted RBP18.83■□□□□ 0.6
RET-205ENST00000615310 CUX1P39880 1505 aa18.82■□□□□ 0.6
RET-205ENST00000615310 LRRC9Q6ZRR7 1453 aa18.82■□□□□ 0.6
RET-205ENST00000615310 BICRAQ9NZM4 1560 aa18.81■□□□□ 0.6
RET-205ENST00000615310 CCDC18Q5T9S5 1454 aa18.81■□□□□ 0.6
RET-205ENST00000615310 NESP48681 1621 aa18.81■□□□□ 0.6
RET-205ENST00000615310 ANKRD30AQ9BXX3 1397 aa18.8■□□□□ 0.6
RET-205ENST00000615310 CDCA8Q53HL2 280 aa18.79■□□□□ 0.6
RET-205ENST00000615310 FGD6Q6ZV73 1430 aa18.78■□□□□ 0.6
RET-205ENST00000615310 TOP2BQ02880 1626 aa18.78■□□□□ 0.6
RET-205ENST00000615310 ERICH3Q5RHP9 1530 aa18.78■□□□□ 0.6
RET-205ENST00000615310 TMF1P82094 1093 aa18.77■□□□□ 0.6
RET-205ENST00000615310 AQRO60306 1485 aaKnown RBP eCLIP18.77■□□□□ 0.59
RET-205ENST00000615310 RBM19Q9Y4C8 960 aaKnown RBP18.77■□□□□ 0.59
RET-205ENST00000615310 TSHZ2Q9NRE2 1034 aa18.76■□□□□ 0.59
RET-205ENST00000615310 RRBP1Q9P2E9 1410 aaKnown RBP18.74■□□□□ 0.59
RET-205ENST00000615310 ROCK2O75116 1388 aaKnown RBP18.72■□□□□ 0.59
RET-205ENST00000615310 PPM1GO15355 546 aaPredicted RBP18.72■□□□□ 0.59
RET-205ENST00000615310 GGT6Q6P531 493 aa18.71■□□□□ 0.59
RET-205ENST00000615310 ST20-MTHFSA0A0A6YYL1 179 aa18.7■□□□□ 0.58
RET-205ENST00000615310 DNAJC5BQ9UF47 199 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms