RNA–Protein interactions for RNA: ENST00000614519.4

MUC1-226, Transcript of mucin 1, cell surface associated, humanhuman

TSL 2 BASIC

Gene MUC1, Length 1,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-226ENST00000614519 SHROOM2Q13796 1616 aa24.19■■□□□ 1.46
MUC1-226ENST00000614519 RIMBP3CA6NJZ7 1639 aa24.15■■□□□ 1.46
MUC1-226ENST00000614519 RIMBP3BA6NNM3 1639 aa24.15■■□□□ 1.46
MUC1-226ENST00000614519 RIMBP3Q9UFD9 1639 aa24.15■■□□□ 1.46
MUC1-226ENST00000614519 KIAA0586Q9BVV6 1533 aa24.15■■□□□ 1.46
MUC1-226ENST00000614519 ARHGEF11O15085 1522 aa24.13■■□□□ 1.45
MUC1-226ENST00000614519 IQGAP2Q13576 1575 aa24.12■■□□□ 1.45
MUC1-226ENST00000614519 ERCC6L2Q5T890 1561 aa24.04■■□□□ 1.44
MUC1-226ENST00000614519 GOLGA3Q08378 1498 aa24.03■■□□□ 1.44
MUC1-226ENST00000614519 JPH4Q96JJ6 628 aa24■■□□□ 1.43
MUC1-226ENST00000614519 PRG4Q92954 1404 aaPredicted RBP23.98■■□□□ 1.43
MUC1-226ENST00000614519 UGGT2Q9NYU1 1516 aa23.97■■□□□ 1.43
MUC1-226ENST00000614519 ARAP1Q96P48 1450 aa23.94■■□□□ 1.42
MUC1-226ENST00000614519 EHMT2Q96KQ7 1210 aa23.94■■□□□ 1.42
MUC1-226ENST00000614519 KIAA0556O60303 1618 aa23.91■■□□□ 1.42
MUC1-226ENST00000614519 DISP1Q96F81 1524 aa23.89■■□□□ 1.42
MUC1-226ENST00000614519 CARMIL2Q6F5E8 1435 aa23.86■■□□□ 1.41
MUC1-226ENST00000614519 UBTFP17480 764 aaKnown RBP23.86■■□□□ 1.41
MUC1-226ENST00000614519 SAMD9Q5K651 1589 aa23.85■■□□□ 1.41
MUC1-226ENST00000614519 CYB5RLQ6IPT4 315 aa23.78■■□□□ 1.4
MUC1-226ENST00000614519 EFCAB5A4FU69 1503 aa23.77■■□□□ 1.4
MUC1-226ENST00000614519 TNIKQ9UKE5 1360 aa23.76■■□□□ 1.39
MUC1-226ENST00000614519 RANGAP1P46060 587 aaPredicted RBP23.73■■□□□ 1.39
MUC1-226ENST00000614519 PTPRGP23470 1445 aa23.7■■□□□ 1.38
MUC1-226ENST00000614519 ADCY10Q96PN6 1610 aa23.68■■□□□ 1.38
MUC1-226ENST00000614519 TTBK1Q5TCY1 1321 aaPredicted RBP23.67■■□□□ 1.38
MUC1-226ENST00000614519 AEBP2Q6ZN18 517 aaPredicted RBP23.67■■□□□ 1.38
MUC1-226ENST00000614519 LOC105371045A0A1W2PR82 267 aa23.66■■□□□ 1.38
MUC1-226ENST00000614519 P3H3Q8IVL6 736 aa23.66■■□□□ 1.38
MUC1-226ENST00000614519 ARHGAP35Q9NRY4 1499 aa23.66■■□□□ 1.38
MUC1-226ENST00000614519 FHOD3Q2V2M9 1422 aa23.65■■□□□ 1.38
MUC1-226ENST00000614519 ABCA8O94911 1581 aa23.61■■□□□ 1.37
MUC1-226ENST00000614519 ABCC2Q92887 1545 aa23.59■■□□□ 1.37
MUC1-226ENST00000614519 UACAQ9BZF9 1416 aa23.59■■□□□ 1.37
MUC1-226ENST00000614519 PLB1Q6P1J6 1458 aa23.58■■□□□ 1.37
MUC1-226ENST00000614519 CLIP1P30622 1438 aa23.58■■□□□ 1.36
MUC1-226ENST00000614519 UHRF1BP1LA0JNW5 1464 aa23.57■■□□□ 1.36
MUC1-226ENST00000614519 RAPGEF6Q8TEU7 1601 aa23.57■■□□□ 1.36
MUC1-226ENST00000614519 CEP162Q5TB80 1403 aa23.57■■□□□ 1.36
MUC1-226ENST00000614519 ZCCHC11Q5TAX3 1644 aaKnown RBP23.51■■□□□ 1.35
MUC1-226ENST00000614519 FMN1Q68DA7 1419 aa23.48■■□□□ 1.35
MUC1-226ENST00000614519 KDM5BQ9UGL1 1544 aa23.46■■□□□ 1.35
MUC1-226ENST00000614519 PCF11O94913 1555 aaKnown RBP23.44■■□□□ 1.34
MUC1-226ENST00000614519 MAPKBP1O60336 1514 aa23.43■■□□□ 1.34
MUC1-226ENST00000614519 HECW1Q76N89 1606 aa23.43■■□□□ 1.34
MUC1-226ENST00000614519 LRRIQ1Q96JM4 1722 aa23.42■■□□□ 1.34
MUC1-226ENST00000614519 NUP153P49790 1475 aaKnown RBP23.42■■□□□ 1.34
MUC1-226ENST00000614519 NPM1P06748 294 aaKnown RBP eCLIP23.41■■□□□ 1.34
MUC1-226ENST00000614519 KIF13AQ9H1H9 1805 aa23.36■■□□□ 1.33
MUC1-226ENST00000614519 ATP10BO94823 1461 aa23.35■■□□□ 1.33
MUC1-226ENST00000614519 FYCO1Q9BQS8 1478 aa23.34■■□□□ 1.33
MUC1-226ENST00000614519 CASKIN1Q8WXD9 1431 aa23.33■■□□□ 1.33
MUC1-226ENST00000614519 ARID3CA6NKF2 412 aa23.32■■□□□ 1.32
MUC1-226ENST00000614519 ASXL2Q76L83 1435 aa23.32■■□□□ 1.32
MUC1-226ENST00000614519 CDK13Q14004 1512 aaKnown RBP23.31■■□□□ 1.32
MUC1-226ENST00000614519 DIP2BQ9P265 1576 aa23.3■■□□□ 1.32
MUC1-226ENST00000614519 EPRSP07814 1512 aaKnown RBP23.29■■□□□ 1.32
MUC1-226ENST00000614519 WDR7Q9Y4E6 1490 aa23.26■■□□□ 1.31
MUC1-226ENST00000614519 ATP1B4Q9UN42 357 aaPredicted RBP23.26■■□□□ 1.31
MUC1-226ENST00000614519 VPS8Q8N3P4 1428 aa23.25■■□□□ 1.31
MUC1-226ENST00000614519 ABCC10Q5T3U5 1492 aa23.25■■□□□ 1.31
MUC1-226ENST00000614519 CCDC18Q5T9S5 1454 aa23.24■■□□□ 1.31
MUC1-226ENST00000614519 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.22■■□□□ 1.31
MUC1-226ENST00000614519 HNRNPUL2Q1KMD3 747 aaKnown RBP23.22■■□□□ 1.31
MUC1-226ENST00000614519 CFAP43Q8NDM7 1665 aa23.2■■□□□ 1.3
MUC1-226ENST00000614519 TRHP20396 242 aaPredicted RBP23.2■■□□□ 1.3
MUC1-226ENST00000614519 GLI2P10070 1586 aa23.19■■□□□ 1.3
MUC1-226ENST00000614519 TSPOAP1O95153 1857 aa23.16■■□□□ 1.3
MUC1-226ENST00000614519 MAP3K4Q9Y6R4 1608 aa23.15■■□□□ 1.3
MUC1-226ENST00000614519 MAGI3Q5TCQ9 1506 aa23.13■■□□□ 1.29
MUC1-226ENST00000614519 ABCA9Q8IUA7 1624 aa23.12■■□□□ 1.29
MUC1-226ENST00000614519 FAM69CQ0P6D2 419 aa23.12■■□□□ 1.29
MUC1-226ENST00000614519 TIAM1Q13009 1591 aa23.11■■□□□ 1.29
MUC1-226ENST00000614519 PLEKHD1A6NEE1 506 aa23.11■■□□□ 1.29
MUC1-226ENST00000614519 PPRC1Q5VV67 1664 aaKnown RBP23.1■■□□□ 1.29
MUC1-226ENST00000614519 KIF14Q15058 1648 aa23.1■■□□□ 1.29
MUC1-226ENST00000614519 KCNH8Q96L42 1107 aa23.09■■□□□ 1.29
MUC1-226ENST00000614519 TROQ12816 1431 aaPredicted RBP23.08■■□□□ 1.29
MUC1-226ENST00000614519 CDK11AQ9UQ88 783 aaPredicted RBP23.07■■□□□ 1.28
MUC1-226ENST00000614519 TTC37Q6PGP7 1564 aa23.06■■□□□ 1.28
MUC1-226ENST00000614519 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.05■■□□□ 1.28
MUC1-226ENST00000614519 MAP3K1Q13233 1512 aa23.04■■□□□ 1.28
MUC1-226ENST00000614519 EHBP1L1Q8N3D4 1523 aa23.03■■□□□ 1.28
MUC1-226ENST00000614519 MYO5CQ9NQX4 1742 aa23.02■■□□□ 1.28
MUC1-226ENST00000614519 CD109Q6YHK3 1445 aa22.99■■□□□ 1.27
MUC1-226ENST00000614519 MTUS2Q5JR59 1369 aa22.98■■□□□ 1.27
MUC1-226ENST00000614519 SUPT6HQ7KZ85 1726 aaKnown RBP22.96■■□□□ 1.27
MUC1-226ENST00000614519 CDC42BPAQ5VT25 1732 aa22.96■■□□□ 1.27
MUC1-226ENST00000614519 LRRC9Q6ZRR7 1453 aa22.95■■□□□ 1.26
MUC1-226ENST00000614519 TEX14Q8IWB6 1497 aa22.94■■□□□ 1.26
MUC1-226ENST00000614519 CDC42BPBQ9Y5S2 1711 aa22.93■■□□□ 1.26
MUC1-226ENST00000614519 PREX2Q70Z35 1606 aa22.93■■□□□ 1.26
MUC1-226ENST00000614519 CFAP74Q9C0B2 1584 aa22.91■■□□□ 1.26
MUC1-226ENST00000614519 APLP2Q06481 763 aa22.9■■□□□ 1.26
MUC1-226ENST00000614519 ITSN2Q9NZM3 1697 aa22.89■■□□□ 1.25
MUC1-226ENST00000614519 ARAP3Q8WWN8 1544 aa22.88■■□□□ 1.25
MUC1-226ENST00000614519 KANK4Q5T7N3 995 aaPredicted RBP22.86■■□□□ 1.25
MUC1-226ENST00000614519 PLCH2O75038 1416 aa22.85■■□□□ 1.25
MUC1-226ENST00000614519 KDM6BO15054 1643 aa22.85■■□□□ 1.25
MUC1-226ENST00000614519 NCOA2Q15596 1464 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms