RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 JPH4Q96JJ6 628 aa21.83■■□□□ 1.09
MDC1-209ENST00000613547 RIMBP3CA6NJZ7 1639 aa21.8■■□□□ 1.08
MDC1-209ENST00000613547 RIMBP3BA6NNM3 1639 aa21.8■■□□□ 1.08
MDC1-209ENST00000613547 KIF21BO75037 1637 aa21.8■■□□□ 1.08
MDC1-209ENST00000613547 RIMBP3Q9UFD9 1639 aa21.8■■□□□ 1.08
MDC1-209ENST00000613547 SHROOM2Q13796 1616 aa21.8■■□□□ 1.08
MDC1-209ENST00000613547 IQGAP2Q13576 1575 aa21.78■■□□□ 1.08
MDC1-209ENST00000613547 PRG4Q92954 1404 aaPredicted RBP21.78■■□□□ 1.08
MDC1-209ENST00000613547 GOLGA3Q08378 1498 aa21.74■■□□□ 1.07
MDC1-209ENST00000613547 CTTNBP2Q8WZ74 1663 aa21.72■■□□□ 1.07
MDC1-209ENST00000613547 CARMIL2Q6F5E8 1435 aa21.71■■□□□ 1.07
MDC1-209ENST00000613547 UBTFP17480 764 aaKnown RBP21.69■■□□□ 1.06
MDC1-209ENST00000613547 ARAP1Q96P48 1450 aa21.69■■□□□ 1.06
MDC1-209ENST00000613547 CYB5RLQ6IPT4 315 aa21.68■■□□□ 1.06
MDC1-209ENST00000613547 EHMT2Q96KQ7 1210 aa21.68■■□□□ 1.06
MDC1-209ENST00000613547 ERCC6L2Q5T890 1561 aa21.68■■□□□ 1.06
MDC1-209ENST00000613547 UGGT2Q9NYU1 1516 aa21.67■■□□□ 1.06
MDC1-209ENST00000613547 DISP1Q96F81 1524 aa21.6■■□□□ 1.05
MDC1-209ENST00000613547 TNIKQ9UKE5 1360 aa21.59■■□□□ 1.05
MDC1-209ENST00000613547 PTPRGP23470 1445 aa21.56■■□□□ 1.04
MDC1-209ENST00000613547 KIAA0556O60303 1618 aa21.56■■□□□ 1.04
MDC1-209ENST00000613547 RANGAP1P46060 587 aaPredicted RBP21.54■■□□□ 1.04
MDC1-209ENST00000613547 TTBK1Q5TCY1 1321 aaPredicted RBP21.53■■□□□ 1.04
MDC1-209ENST00000613547 EFCAB5A4FU69 1503 aa21.48■■□□□ 1.03
MDC1-209ENST00000613547 P3H3Q8IVL6 736 aa21.47■■□□□ 1.03
MDC1-209ENST00000613547 SAMD9Q5K651 1589 aa21.47■■□□□ 1.03
MDC1-209ENST00000613547 UACAQ9BZF9 1416 aa21.41■■□□□ 1.02
MDC1-209ENST00000613547 NPM1P06748 294 aaKnown RBP eCLIP21.41■■□□□ 1.02
MDC1-209ENST00000613547 FHOD3Q2V2M9 1422 aa21.38■■□□□ 1.01
MDC1-209ENST00000613547 LOC105371045A0A1W2PR82 267 aa21.38■■□□□ 1.01
MDC1-209ENST00000613547 UHRF1BP1LA0JNW5 1464 aa21.37■■□□□ 1.01
MDC1-209ENST00000613547 ARHGAP35Q9NRY4 1499 aa21.36■■□□□ 1.01
MDC1-209ENST00000613547 CLIP1P30622 1438 aa21.36■■□□□ 1.01
MDC1-209ENST00000613547 ADCY10Q96PN6 1610 aa21.35■■□□□ 1.01
MDC1-209ENST00000613547 ABCC2Q92887 1545 aa21.34■■□□□ 1.01
MDC1-209ENST00000613547 PLB1Q6P1J6 1458 aa21.33■■□□□ 1.01
MDC1-209ENST00000613547 ABCA8O94911 1581 aa21.31■■□□□ 1
MDC1-209ENST00000613547 FMN1Q68DA7 1419 aa21.3■■□□□ 1
MDC1-209ENST00000613547 CEP162Q5TB80 1403 aa21.29■■□□□ 1
MDC1-209ENST00000613547 KDM5BQ9UGL1 1544 aa21.24■□□□□ 0.99
MDC1-209ENST00000613547 RAPGEF6Q8TEU7 1601 aa21.24■□□□□ 0.99
MDC1-209ENST00000613547 MAPKBP1O60336 1514 aa21.23■□□□□ 0.99
MDC1-209ENST00000613547 TRHP20396 242 aaPredicted RBP21.2■□□□□ 0.98
MDC1-209ENST00000613547 ATP1B4Q9UN42 357 aaPredicted RBP21.18■□□□□ 0.98
MDC1-209ENST00000613547 ARID3CA6NKF2 412 aa21.17■□□□□ 0.98
MDC1-209ENST00000613547 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.17■□□□□ 0.98
MDC1-209ENST00000613547 HNRNPUL2Q1KMD3 747 aaKnown RBP21.17■□□□□ 0.98
MDC1-209ENST00000613547 NUP153P49790 1475 aaKnown RBP21.17■□□□□ 0.98
MDC1-209ENST00000613547 ZCCHC11Q5TAX3 1644 aaKnown RBP21.17■□□□□ 0.98
MDC1-209ENST00000613547 ASXL2Q76L83 1435 aa21.16■□□□□ 0.98
MDC1-209ENST00000613547 HECW1Q76N89 1606 aa21.15■□□□□ 0.98
MDC1-209ENST00000613547 ATP10BO94823 1461 aa21.14■□□□□ 0.98
MDC1-209ENST00000613547 CASKIN1Q8WXD9 1431 aa21.13■□□□□ 0.97
MDC1-209ENST00000613547 ABCC10Q5T3U5 1492 aa21.1■□□□□ 0.97
MDC1-209ENST00000613547 FYCO1Q9BQS8 1478 aa21.1■□□□□ 0.97
MDC1-209ENST00000613547 WDR7Q9Y4E6 1490 aa21.09■□□□□ 0.97
MDC1-209ENST00000613547 PCF11O94913 1555 aaKnown RBP21.09■□□□□ 0.97
MDC1-209ENST00000613547 FAM69CQ0P6D2 419 aa21.08■□□□□ 0.97
MDC1-209ENST00000613547 EPRSP07814 1512 aaKnown RBP21.07■□□□□ 0.96
MDC1-209ENST00000613547 PLEKHD1A6NEE1 506 aa21.06■□□□□ 0.96
MDC1-209ENST00000613547 CDK11AQ9UQ88 783 aaPredicted RBP21.05■□□□□ 0.96
MDC1-209ENST00000613547 CCDC18Q5T9S5 1454 aa21.05■□□□□ 0.96
MDC1-209ENST00000613547 DIP2BQ9P265 1576 aa21.04■□□□□ 0.96
MDC1-209ENST00000613547 CDK13Q14004 1512 aaKnown RBP21.04■□□□□ 0.96
MDC1-209ENST00000613547 VPS8Q8N3P4 1428 aa21.03■□□□□ 0.96
MDC1-209ENST00000613547 KCNH8Q96L42 1107 aa21.01■□□□□ 0.95
MDC1-209ENST00000613547 GLI2P10070 1586 aa20.98■□□□□ 0.95
MDC1-209ENST00000613547 KIF13AQ9H1H9 1805 aa20.94■□□□□ 0.94
MDC1-209ENST00000613547 TROQ12816 1431 aaPredicted RBP20.91■□□□□ 0.94
MDC1-209ENST00000613547 LRRIQ1Q96JM4 1722 aa20.9■□□□□ 0.94
MDC1-209ENST00000613547 CD109Q6YHK3 1445 aa20.88■□□□□ 0.93
MDC1-209ENST00000613547 APLP2Q06481 763 aa20.88■□□□□ 0.93
MDC1-209ENST00000613547 MTUS2Q5JR59 1369 aa20.87■□□□□ 0.93
MDC1-209ENST00000613547 MAP3K4Q9Y6R4 1608 aa20.87■□□□□ 0.93
MDC1-209ENST00000613547 CFAP43Q8NDM7 1665 aa20.86■□□□□ 0.93
MDC1-209ENST00000613547 ABCA9Q8IUA7 1624 aa20.86■□□□□ 0.93
MDC1-209ENST00000613547 TEX14Q8IWB6 1497 aa20.85■□□□□ 0.93
MDC1-209ENST00000613547 KIF14Q15058 1648 aa20.85■□□□□ 0.93
MDC1-209ENST00000613547 MAGI3Q5TCQ9 1506 aa20.83■□□□□ 0.92
MDC1-209ENST00000613547 TIAM1Q13009 1591 aa20.81■□□□□ 0.92
MDC1-209ENST00000613547 MAP3K1Q13233 1512 aa20.81■□□□□ 0.92
MDC1-209ENST00000613547 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.81■□□□□ 0.92
MDC1-209ENST00000613547 EHBP1L1Q8N3D4 1523 aa20.8■□□□□ 0.92
MDC1-209ENST00000613547 TSPOAP1O95153 1857 aa20.77■□□□□ 0.92
MDC1-209ENST00000613547 TTC37Q6PGP7 1564 aa20.77■□□□□ 0.92
MDC1-209ENST00000613547 AEBP2Q6ZN18 517 aaPredicted RBP20.77■□□□□ 0.92
MDC1-209ENST00000613547 LRRC9Q6ZRR7 1453 aa20.75■□□□□ 0.91
MDC1-209ENST00000613547 PPRC1Q5VV67 1664 aaKnown RBP20.74■□□□□ 0.91
MDC1-209ENST00000613547 PLCH2O75038 1416 aa20.74■□□□□ 0.91
MDC1-209ENST00000613547 PHLDB1Q86UU1 1377 aa20.72■□□□□ 0.91
MDC1-209ENST00000613547 FANCAO15360 1455 aa20.71■□□□□ 0.91
MDC1-209ENST00000613547 NEO1Q92859 1461 aa20.71■□□□□ 0.91
MDC1-209ENST00000613547 ARAP3Q8WWN8 1544 aa20.7■□□□□ 0.9
MDC1-209ENST00000613547 EFCAB2Q5VUJ9 269 aa20.7■□□□□ 0.9
MDC1-209ENST00000613547 CCNB3Q8WWL7 1395 aa20.7■□□□□ 0.9
MDC1-209ENST00000613547 CFAP74Q9C0B2 1584 aa20.68■□□□□ 0.9
MDC1-209ENST00000613547 KDM6BO15054 1643 aa20.68■□□□□ 0.9
MDC1-209ENST00000613547 MYO5CQ9NQX4 1742 aa20.68■□□□□ 0.9
MDC1-209ENST00000613547 KANK4Q5T7N3 995 aaPredicted RBP20.68■□□□□ 0.9
MDC1-209ENST00000613547 ARHGAP5Q13017 1502 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms