RNA–Protein interactions for RNA: ENST00000613394.4

HPS1-215, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS1, Length 3,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-215ENST00000613394 HNRNPUQ00839 825 aaKnown RBP eCLIP19.37■□□□□ 0.69
HPS1-215ENST00000613394 TSHZ2Q9NRE2 1034 aa19.35■□□□□ 0.69
HPS1-215ENST00000613394 SETD5Q9C0A6 1442 aa19.35■□□□□ 0.69
HPS1-215ENST00000613394 RRP7BPQ9NSQ0 103 aa19.34■□□□□ 0.69
HPS1-215ENST00000613394 PRXQ9BXM0 1461 aa19.33■□□□□ 0.68
HPS1-215ENST00000613394 MTUS2Q5JR59 1369 aa19.31■□□□□ 0.68
HPS1-215ENST00000613394 TOP2BQ02880 1626 aa19.29■□□□□ 0.68
HPS1-215ENST00000613394 ARHGAP35Q9NRY4 1499 aa19.28■□□□□ 0.68
HPS1-215ENST00000613394 ZNF326Q5BKZ1 582 aaKnown RBP19.27■□□□□ 0.68
HPS1-215ENST00000613394 IGF1RP08069 1367 aa19.27■□□□□ 0.68
HPS1-215ENST00000613394 PHLDB1Q86UU1 1377 aa19.25■□□□□ 0.67
HPS1-215ENST00000613394 FHOD3Q2V2M9 1422 aa19.25■□□□□ 0.67
HPS1-215ENST00000613394 CUX1P39880 1505 aa19.25■□□□□ 0.67
HPS1-215ENST00000613394 SENP3-EIF4A1A0A087X0R7 540 aa19.24■□□□□ 0.67
HPS1-215ENST00000613394 RRBP1Q9P2E9 1410 aaKnown RBP19.24■□□□□ 0.67
HPS1-215ENST00000613394 FAM9BQ8IZU0 186 aa19.24■□□□□ 0.67
HPS1-215ENST00000613394 PPP1R15AO75807 674 aaPredicted RBP19.23■□□□□ 0.67
HPS1-215ENST00000613394 PEG3Q9GZU2 1588 aa19.19■□□□□ 0.66
HPS1-215ENST00000613394 ERICH3Q5RHP9 1530 aa19.19■□□□□ 0.66
HPS1-215ENST00000613394 NCAPD3P42695 1498 aa19.18■□□□□ 0.66
HPS1-215ENST00000613394 FHAD1B1AJZ9 1412 aa19.17■□□□□ 0.66
HPS1-215ENST00000613394 DNAJC5BQ9UF47 199 aa19.17■□□□□ 0.66
HPS1-215ENST00000613394 ANP32EQ9BTT0 268 aa19.16■□□□□ 0.66
HPS1-215ENST00000613394 CDK11AQ9UQ88 783 aaPredicted RBP19.15■□□□□ 0.66
HPS1-215ENST00000613394 FOXD1Q16676 465 aa19.14■□□□□ 0.66
HPS1-215ENST00000613394 CADPSQ9ULU8 1353 aa19.13■□□□□ 0.65
HPS1-215ENST00000613394 FGD5Q6ZNL6 1462 aa19.1■□□□□ 0.65
HPS1-215ENST00000613394 ZNF777Q9ULD5 760 aaPredicted RBP19.1■□□□□ 0.65
HPS1-215ENST00000613394 RBM19Q9Y4C8 960 aaKnown RBP19.1■□□□□ 0.65
HPS1-215ENST00000613394 TDRD9Q8NDG6 1382 aaKnown RBP19.09■□□□□ 0.65
HPS1-215ENST00000613394 LRRC9Q6ZRR7 1453 aa19.09■□□□□ 0.65
HPS1-215ENST00000613394 MRS2Q9HD23 443 aa19.08■□□□□ 0.64
HPS1-215ENST00000613394 CFTRP13569 1480 aa19.07■□□□□ 0.64
HPS1-215ENST00000613394 WDR97A6NE52 1622 aa19.07■□□□□ 0.64
HPS1-215ENST00000613394 RAD54L2Q9Y4B4 1467 aa19.06■□□□□ 0.64
HPS1-215ENST00000613394 EIF4G2P78344 907 aaKnown RBP eCLIP19.06■□□□□ 0.64
HPS1-215ENST00000613394 CCER2I3L3R5 266 aa19.05■□□□□ 0.64
HPS1-215ENST00000613394 TIMELESSQ9UNS1 1208 aa19.05■□□□□ 0.64
HPS1-215ENST00000613394 HSPA5P11021 654 aaKnown RBP19.04■□□□□ 0.64
HPS1-215ENST00000613394 FBLN2P98095 1184 aa19.03■□□□□ 0.64
HPS1-215ENST00000613394 BIVM-ERCC5R4GMW8 1640 aa18.98■□□□□ 0.63
HPS1-215ENST00000613394 TIAM1Q13009 1591 aa18.98■□□□□ 0.63
HPS1-215ENST00000613394 SLC4A1APQ9BWU0 796 aaKnown RBP18.97■□□□□ 0.63
HPS1-215ENST00000613394 SALL2Q9Y467 1007 aaPredicted RBP18.96■□□□□ 0.63
HPS1-215ENST00000613394 MAPKBP1O60336 1514 aa18.95■□□□□ 0.62
HPS1-215ENST00000613394 CC2D2AQ9P2K1 1620 aa18.95■□□□□ 0.62
HPS1-215ENST00000613394 B4GALNT3Q6L9W6 998 aa18.95■□□□□ 0.62
HPS1-215ENST00000613394 FANCD2Q9BXW9 1451 aa18.94■□□□□ 0.62
HPS1-215ENST00000613394 NESP48681 1621 aa18.93■□□□□ 0.62
HPS1-215ENST00000613394 HMGXB3Q12766 1538 aa18.93■□□□□ 0.62
HPS1-215ENST00000613394 CCDC18Q5T9S5 1454 aa18.92■□□□□ 0.62
HPS1-215ENST00000613394 L3MBTL2Q969R5 705 aa18.92■□□□□ 0.62
HPS1-215ENST00000613394 FMN1Q68DA7 1419 aa18.9■□□□□ 0.62
HPS1-215ENST00000613394 FGD6Q6ZV73 1430 aa18.9■□□□□ 0.62
HPS1-215ENST00000613394 MPHOSPH9Q99550 1183 aa18.89■□□□□ 0.61
HPS1-215ENST00000613394 KDM2AQ9Y2K7 1162 aa18.89■□□□□ 0.61
HPS1-215ENST00000613394 CCDC184Q52MB2 194 aa18.85■□□□□ 0.61
HPS1-215ENST00000613394 PCF11O94913 1555 aaKnown RBP18.83■□□□□ 0.61
HPS1-215ENST00000613394 WASHC2AQ641Q2 1341 aa18.83■□□□□ 0.6
HPS1-215ENST00000613394 CASKIN1Q8WXD9 1431 aa18.81■□□□□ 0.6
HPS1-215ENST00000613394 NBR1Q14596 966 aa18.81■□□□□ 0.6
HPS1-215ENST00000613394 TMC1Q8TDI8 760 aa18.79■□□□□ 0.6
HPS1-215ENST00000613394 CCDC136Q96JN2 1154 aa18.79■□□□□ 0.6
HPS1-215ENST00000613394 PPP4R2Q9NY27 417 aa18.79■□□□□ 0.6
HPS1-215ENST00000613394 UACAQ9BZF9 1416 aa18.78■□□□□ 0.6
HPS1-215ENST00000613394 NPM2Q86SE8 214 aaKnown RBP18.77■□□□□ 0.6
HPS1-215ENST00000613394 ZNF644Q9H582 1327 aaPredicted RBP18.76■□□□□ 0.59
HPS1-215ENST00000613394 NCOA2Q15596 1464 aa18.75■□□□□ 0.59
HPS1-215ENST00000613394 CFDP1Q9UEE9 299 aaPredicted RBP18.75■□□□□ 0.59
HPS1-215ENST00000613394 POLA1P09884 1462 aaPredicted RBP18.75■□□□□ 0.59
HPS1-215ENST00000613394 PTPRKQ15262 1439 aa18.74■□□□□ 0.59
HPS1-215ENST00000613394 FYCO1Q9BQS8 1478 aa18.74■□□□□ 0.59
HPS1-215ENST00000613394 PRKRIP1Q9H875 184 aaPredicted RBP18.74■□□□□ 0.59
HPS1-215ENST00000613394 MYOM3Q5VTT5 1437 aa18.73■□□□□ 0.59
HPS1-215ENST00000613394 BCL11AQ9H165 835 aa18.73■□□□□ 0.59
HPS1-215ENST00000613394 C11orf95C9JLR9 678 aaPredicted RBP18.72■□□□□ 0.59
HPS1-215ENST00000613394 NAIPQ13075 1403 aa18.7■□□□□ 0.58
HPS1-215ENST00000613394 HFM1A2PYH4 1435 aa18.69■□□□□ 0.58
HPS1-215ENST00000613394 TOPBP1Q92547 1522 aa18.68■□□□□ 0.58
HPS1-215ENST00000613394 MAP3K1Q13233 1512 aa18.68■□□□□ 0.58
HPS1-215ENST00000613394 NBPF8Q3BBV2 869 aa18.67■□□□□ 0.58
HPS1-215ENST00000613394 RGL3Q3MIN7 710 aa18.67■□□□□ 0.58
HPS1-215ENST00000613394 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.67■□□□□ 0.58
HPS1-215ENST00000613394 GAPVD1Q14C86 1478 aa18.66■□□□□ 0.58
HPS1-215ENST00000613394 PKD2Q13563 968 aa18.66■□□□□ 0.58
HPS1-215ENST00000613394 AQRO60306 1485 aaKnown RBP eCLIP18.66■□□□□ 0.587e-7■■■■■ 30.1
HPS1-215ENST00000613394 CARD11Q9BXL7 1154 aa18.66■□□□□ 0.58
HPS1-215ENST00000613394 CHMP7Q8WUX9 453 aaPredicted RBP18.65■□□□□ 0.58
HPS1-215ENST00000613394 RTL5Q5HYW3 569 aaPredicted RBP18.65■□□□□ 0.58
HPS1-215ENST00000613394 ANP32AP39687 249 aaKnown RBP18.64■□□□□ 0.58
HPS1-215ENST00000613394 MSH5O43196 834 aa18.63■□□□□ 0.57
HPS1-215ENST00000613394 PDS5BQ9NTI5 1447 aa18.62■□□□□ 0.57
HPS1-215ENST00000613394 KIF7Q2M1P5 1343 aa18.61■□□□□ 0.57
HPS1-215ENST00000613394 CCDC7Q96M83 1385 aa18.61■□□□□ 0.57
HPS1-215ENST00000613394 TSPY4P0CV99 314 aa18.6■□□□□ 0.57
HPS1-215ENST00000613394 TSPY10P0CW01 314 aa18.6■□□□□ 0.57
HPS1-215ENST00000613394 MYT1LQ9UL68 1186 aa18.6■□□□□ 0.57
HPS1-215ENST00000613394 DCAF11Q8TEB1 546 aa18.58■□□□□ 0.57
HPS1-215ENST00000613394 EFCAB5A4FU69 1503 aa18.58■□□□□ 0.57
HPS1-215ENST00000613394 ABCA10Q8WWZ4 1543 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms