RNA–Protein interactions for RNA: ENST00000613299.1

CRX-207, Transcript of cone-rod homeobox, humanhuman

TSL 3 BASIC

Gene CRX, Length 4,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-207ENST00000613299 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.98□□□□□ -0.17
CRX-207ENST00000613299 ARHGAP35Q9NRY4 1499 aa13.98□□□□□ -0.17
CRX-207ENST00000613299 ARAP1Q96P48 1450 aa13.98□□□□□ -0.17
CRX-207ENST00000613299 FMN1Q68DA7 1419 aa13.97□□□□□ -0.17
CRX-207ENST00000613299 ITGAEP38570 1179 aa13.95□□□□□ -0.18
CRX-207ENST00000613299 EFCAB5A4FU69 1503 aa13.95□□□□□ -0.18
CRX-207ENST00000613299 WDR62O43379 1518 aa13.94□□□□□ -0.18
CRX-207ENST00000613299 FHOD3Q2V2M9 1422 aa13.93□□□□□ -0.18
CRX-207ENST00000613299 FAM50AQ14320 339 aaKnown RBP13.92□□□□□ -0.18
CRX-207ENST00000613299 ABCA5Q8WWZ7 1642 aa13.92□□□□□ -0.18
CRX-207ENST00000613299 MTUS2Q5JR59 1369 aa13.9□□□□□ -0.18
CRX-207ENST00000613299 KANK4Q5T7N3 995 aaPredicted RBP13.89□□□□□ -0.19
CRX-207ENST00000613299 CDK11AQ9UQ88 783 aaPredicted RBP13.89□□□□□ -0.19
CRX-207ENST00000613299 TARBP1Q13395 1621 aaKnown RBP13.88□□□□□ -0.19
CRX-207ENST00000613299 WDR97A6NE52 1622 aa13.87□□□□□ -0.19
CRX-207ENST00000613299 SNAPC4Q5SXM2 1469 aa13.85□□□□□ -0.19
CRX-207ENST00000613299 ZNF608Q9ULD9 1512 aaPredicted RBP13.85□□□□□ -0.19
CRX-207ENST00000613299 CTTNBP2Q8WZ74 1663 aa13.84□□□□□ -0.19
CRX-207ENST00000613299 CASKIN1Q8WXD9 1431 aa13.83□□□□□ -0.19
CRX-207ENST00000613299 CCNB3Q8WWL7 1395 aa13.83□□□□□ -0.2
CRX-207ENST00000613299 MAGI1Q96QZ7 1491 aaPredicted RBP13.83□□□□□ -0.2
CRX-207ENST00000613299 CARMIL2Q6F5E8 1435 aa13.83□□□□□ -0.2
CRX-207ENST00000613299 FYCO1Q9BQS8 1478 aa13.82□□□□□ -0.2
CRX-207ENST00000613299 PBRM1Q86U86 1689 aa13.82□□□□□ -0.2
CRX-207ENST00000613299 ADAMTS12P58397 1594 aa13.81□□□□□ -0.2
CRX-207ENST00000613299 ARID3CA6NKF2 412 aa13.8□□□□□ -0.2
CRX-207ENST00000613299 IQGAP2Q13576 1575 aa13.8□□□□□ -0.2
CRX-207ENST00000613299 MAP3K1Q13233 1512 aa13.8□□□□□ -0.2
CRX-207ENST00000613299 KIAA0586Q9BVV6 1533 aa13.79□□□□□ -0.2
CRX-207ENST00000613299 SYNJ2O15056 1496 aa13.78□□□□□ -0.2
CRX-207ENST00000613299 TIAM1Q13009 1591 aa13.78□□□□□ -0.2
CRX-207ENST00000613299 GRIN2AQ12879 1464 aa13.77□□□□□ -0.2
CRX-207ENST00000613299 LRRC9Q6ZRR7 1453 aa13.77□□□□□ -0.2
CRX-207ENST00000613299 EIF4G3O43432 1585 aaKnown RBP13.76□□□□□ -0.21
CRX-207ENST00000613299 THOC2Q8NI27 1593 aaKnown RBP13.76□□□□□ -0.21
CRX-207ENST00000613299 JPH4Q96JJ6 628 aa13.75□□□□□ -0.21
CRX-207ENST00000613299 PCF11O94913 1555 aaKnown RBP13.74□□□□□ -0.21
CRX-207ENST00000613299 CCDC18Q5T9S5 1454 aa13.74□□□□□ -0.21
CRX-207ENST00000613299 RRBP1Q9P2E9 1410 aaKnown RBP13.71□□□□□ -0.22
CRX-207ENST00000613299 PLEKHD1A6NEE1 506 aa13.68□□□□□ -0.22
CRX-207ENST00000613299 HECW1Q76N89 1606 aa13.68□□□□□ -0.22
CRX-207ENST00000613299 SAMD9Q5K651 1589 aa13.67□□□□□ -0.22
CRX-207ENST00000613299 UGGT2Q9NYU1 1516 aa13.67□□□□□ -0.22
CRX-207ENST00000613299 CLSPNQ9HAW4 1339 aa13.66□□□□□ -0.22
CRX-207ENST00000613299 PHLDB1Q86UU1 1377 aa13.64□□□□□ -0.23
CRX-207ENST00000613299 EHBP1L1Q8N3D4 1523 aa13.64□□□□□ -0.23
CRX-207ENST00000613299 CFAP43Q8NDM7 1665 aa13.63□□□□□ -0.23
CRX-207ENST00000613299 SETD5Q9C0A6 1442 aa13.62□□□□□ -0.23
CRX-207ENST00000613299 ZNF777Q9ULD5 760 aaPredicted RBP13.61□□□□□ -0.23
CRX-207ENST00000613299 PTPRGP23470 1445 aa13.6□□□□□ -0.23
CRX-207ENST00000613299 NCOA2Q15596 1464 aa13.6□□□□□ -0.23
CRX-207ENST00000613299 FGD6Q6ZV73 1430 aa13.6□□□□□ -0.23
CRX-207ENST00000613299 TRIM52Q96A61 297 aa13.6□□□□□ -0.23
CRX-207ENST00000613299 ACIN1Q9UKV3 1341 aaKnown RBP13.6□□□□□ -0.23
CRX-207ENST00000613299 MYOM3Q5VTT5 1437 aa13.6□□□□□ -0.23
CRX-207ENST00000613299 EPRSP07814 1512 aaKnown RBP13.6□□□□□ -0.23
CRX-207ENST00000613299 NUP160Q12769 1436 aa13.59□□□□□ -0.23
CRX-207ENST00000613299 SUPT6HQ7KZ85 1726 aaKnown RBP13.58□□□□□ -0.23
CRX-207ENST00000613299 CFDP1Q9UEE9 299 aaPredicted RBP13.58□□□□□ -0.23
CRX-207ENST00000613299 KIAA0556O60303 1618 aa13.58□□□□□ -0.23
CRX-207ENST00000613299 PRG4Q92954 1404 aaPredicted RBP13.58□□□□□ -0.24
CRX-207ENST00000613299 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.58□□□□□ -0.24
CRX-207ENST00000613299 CHIC2Q9UKJ5 165 aa13.57□□□□□ -0.24
CRX-207ENST00000613299 RAB3GAP2Q9H2M9 1393 aa13.56□□□□□ -0.24
CRX-207ENST00000613299 CEP170Q5SW79 1584 aa13.54□□□□□ -0.24
CRX-207ENST00000613299 DISP1Q96F81 1524 aa13.54□□□□□ -0.24
CRX-207ENST00000613299 ZNF316A6NFI3 1004 aaPredicted RBP13.53□□□□□ -0.24
CRX-207ENST00000613299 NEUROD1Q13562 356 aa13.53□□□□□ -0.24
CRX-207ENST00000613299 CDK13Q14004 1512 aaKnown RBP13.53□□□□□ -0.24
CRX-207ENST00000613299 RRP7BPQ9NSQ0 103 aa13.52□□□□□ -0.25
CRX-207ENST00000613299 RAPGEF6Q8TEU7 1601 aa13.52□□□□□ -0.25
CRX-207ENST00000613299 NPM1P06748 294 aaKnown RBP eCLIP13.51□□□□□ -0.25
CRX-207ENST00000613299 DHX57Q6P158 1386 aaKnown RBP13.51□□□□□ -0.25
CRX-207ENST00000613299 MIA2Q96PC5 1412 aa13.51□□□□□ -0.25
CRX-207ENST00000613299 TSPY4P0CV99 314 aa13.5□□□□□ -0.25
CRX-207ENST00000613299 TSPY10P0CW01 314 aa13.5□□□□□ -0.25
CRX-207ENST00000613299 TROQ12816 1431 aaPredicted RBP13.5□□□□□ -0.25
CRX-207ENST00000613299 PLB1Q6P1J6 1458 aa13.48□□□□□ -0.25
CRX-207ENST00000613299 DIEXFQ68CQ4 756 aaKnown RBP13.48□□□□□ -0.25
CRX-207ENST00000613299 NUP153P49790 1475 aaKnown RBP13.46□□□□□ -0.25
CRX-207ENST00000613299 KCNH8Q96L42 1107 aa13.46□□□□□ -0.25
CRX-207ENST00000613299 OSCARQ8IYS5 282 aa13.45□□□□□ -0.26
CRX-207ENST00000613299 MYT1LQ9UL68 1186 aa13.44□□□□□ -0.26
CRX-207ENST00000613299 TONSLQ96HA7 1378 aa13.44□□□□□ -0.26
CRX-207ENST00000613299 UACAQ9BZF9 1416 aa13.44□□□□□ -0.26
CRX-207ENST00000613299 PELP1Q8IZL8 1130 aaKnown RBP13.43□□□□□ -0.26
CRX-207ENST00000613299 PTPN23Q9H3S7 1636 aa13.43□□□□□ -0.26
CRX-207ENST00000613299 TIMELESSQ9UNS1 1208 aa13.42□□□□□ -0.26
CRX-207ENST00000613299 CHD1O14646 1710 aa13.4□□□□□ -0.26
CRX-207ENST00000613299 RSPH4AQ5TD94 716 aa13.39□□□□□ -0.27
CRX-207ENST00000613299 HFM1A2PYH4 1435 aa13.39□□□□□ -0.27
CRX-207ENST00000613299 ANKRD30AQ9BXX3 1397 aa13.39□□□□□ -0.27
CRX-207ENST00000613299 KIF14Q15058 1648 aa13.37□□□□□ -0.27
CRX-207ENST00000613299 SLC4A1APQ9BWU0 796 aaKnown RBP13.37□□□□□ -0.27
CRX-207ENST00000613299 TCOF1Q13428 1488 aaKnown RBP13.36□□□□□ -0.27
CRX-207ENST00000613299 ATP10BO94823 1461 aa13.36□□□□□ -0.27
CRX-207ENST00000613299 MAGI3Q5TCQ9 1506 aa13.36□□□□□ -0.27
CRX-207ENST00000613299 SIN3AQ96ST3 1273 aa13.35□□□□□ -0.27
CRX-207ENST00000613299 EFCAB2Q5VUJ9 269 aa13.35□□□□□ -0.27
CRX-207ENST00000613299 ZNF644Q9H582 1327 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms