RNA–Protein interactions for RNA: ENST00000612303.1

NEAT1-204, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 3 BASIC

Gene NEAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-204ENST00000612303 KIAA0586Q9BVV6 1533 aa21.09■□□□□ 0.97
NEAT1-204ENST00000612303 FBLN2P98095 1184 aa21.09■□□□□ 0.97
NEAT1-204ENST00000612303 NUP160Q12769 1436 aa21.08■□□□□ 0.97
NEAT1-204ENST00000612303 ARHGAP35Q9NRY4 1499 aa21.07■□□□□ 0.96
NEAT1-204ENST00000612303 EFCAB5A4FU69 1503 aa21.07■□□□□ 0.96
NEAT1-204ENST00000612303 IQGAP2Q13576 1575 aa21.06■□□□□ 0.96
NEAT1-204ENST00000612303 RANGAP1P46060 587 aaPredicted RBP21.06■□□□□ 0.96
NEAT1-204ENST00000612303 CEP170Q5SW79 1584 aa21.04■□□□□ 0.96
NEAT1-204ENST00000612303 CHD1O14646 1710 aa21.04■□□□□ 0.96
NEAT1-204ENST00000612303 ARAP1Q96P48 1450 aa21.01■□□□□ 0.95
NEAT1-204ENST00000612303 VPS8Q8N3P4 1428 aa21.01■□□□□ 0.95
NEAT1-204ENST00000612303 UGGT2Q9NYU1 1516 aa21■□□□□ 0.95
NEAT1-204ENST00000612303 SAMD9Q5K651 1589 aa20.99■□□□□ 0.95
NEAT1-204ENST00000612303 JPH4Q96JJ6 628 aa20.91■□□□□ 0.94
NEAT1-204ENST00000612303 P3H3Q8IVL6 736 aa20.89■□□□□ 0.93
NEAT1-204ENST00000612303 FHOD3Q2V2M9 1422 aa20.88■□□□□ 0.93
NEAT1-204ENST00000612303 FMN1Q68DA7 1419 aa20.87■□□□□ 0.93
NEAT1-204ENST00000612303 DISP1Q96F81 1524 aa20.86■□□□□ 0.93
NEAT1-204ENST00000612303 CARMIL2Q6F5E8 1435 aa20.85■□□□□ 0.93
NEAT1-204ENST00000612303 KIAA0556O60303 1618 aa20.84■□□□□ 0.93
NEAT1-204ENST00000612303 CLASP1Q7Z460 1538 aa20.83■□□□□ 0.92
NEAT1-204ENST00000612303 SHROOM2Q13796 1616 aa20.82■□□□□ 0.92
NEAT1-204ENST00000612303 APLP2Q06481 763 aa20.82■□□□□ 0.92
NEAT1-204ENST00000612303 CASKIN1Q8WXD9 1431 aa20.8■□□□□ 0.92
NEAT1-204ENST00000612303 FYCO1Q9BQS8 1478 aa20.78■□□□□ 0.92
NEAT1-204ENST00000612303 MAP3K1Q13233 1512 aa20.77■□□□□ 0.92
NEAT1-204ENST00000612303 OSCARQ8IYS5 282 aa20.76■□□□□ 0.91
NEAT1-204ENST00000612303 PRG4Q92954 1404 aaPredicted RBP20.76■□□□□ 0.91
NEAT1-204ENST00000612303 PCF11O94913 1555 aaKnown RBP20.74■□□□□ 0.91
NEAT1-204ENST00000612303 TIAM1Q13009 1591 aa20.66■□□□□ 0.9
NEAT1-204ENST00000612303 CFAP43Q8NDM7 1665 aa20.64■□□□□ 0.9
NEAT1-204ENST00000612303 HECW1Q76N89 1606 aa20.64■□□□□ 0.9
NEAT1-204ENST00000612303 PTPRGP23470 1445 aa20.64■□□□□ 0.89
NEAT1-204ENST00000612303 PPARGC1BQ86YN6 1023 aaKnown RBP20.64■□□□□ 0.89
NEAT1-204ENST00000612303 ATP1B4Q9UN42 357 aaPredicted RBP20.64■□□□□ 0.89
NEAT1-204ENST00000612303 TRIM26Q12899 539 aaPredicted RBP20.63■□□□□ 0.89
NEAT1-204ENST00000612303 RAPGEF6Q8TEU7 1601 aa20.63■□□□□ 0.89
NEAT1-204ENST00000612303 CCDC18Q5T9S5 1454 aa20.62■□□□□ 0.89
NEAT1-204ENST00000612303 ABCA8O94911 1581 aa20.59■□□□□ 0.89
NEAT1-204ENST00000612303 ERCC6L2Q5T890 1561 aa20.59■□□□□ 0.89
NEAT1-204ENST00000612303 LRRIQ1Q96JM4 1722 aa20.59■□□□□ 0.89
NEAT1-204ENST00000612303 KANK4Q5T7N3 995 aaPredicted RBP20.59■□□□□ 0.89
NEAT1-204ENST00000612303 LRRC9Q6ZRR7 1453 aa20.57■□□□□ 0.88
NEAT1-204ENST00000612303 EPRSP07814 1512 aaKnown RBP20.57■□□□□ 0.88
NEAT1-204ENST00000612303 TTBK1Q5TCY1 1321 aaPredicted RBP20.56■□□□□ 0.88
NEAT1-204ENST00000612303 NUP153P49790 1475 aaKnown RBP20.56■□□□□ 0.88
NEAT1-204ENST00000612303 PLB1Q6P1J6 1458 aa20.56■□□□□ 0.88
NEAT1-204ENST00000612303 UACAQ9BZF9 1416 aa20.52■□□□□ 0.87
NEAT1-204ENST00000612303 MTUS2Q5JR59 1369 aa20.48■□□□□ 0.87
NEAT1-204ENST00000612303 CDK11AQ9UQ88 783 aaPredicted RBP20.48■□□□□ 0.87
NEAT1-204ENST00000612303 UHRF1BP1LA0JNW5 1464 aa20.47■□□□□ 0.87
NEAT1-204ENST00000612303 PCGF6Q9BYE7 350 aa20.46■□□□□ 0.87
NEAT1-204ENST00000612303 CDK13Q14004 1512 aaKnown RBP20.46■□□□□ 0.87
NEAT1-204ENST00000612303 EHBP1L1Q8N3D4 1523 aa20.46■□□□□ 0.87
NEAT1-204ENST00000612303 ABCC2Q92887 1545 aa20.45■□□□□ 0.86
NEAT1-204ENST00000612303 ATP10BO94823 1461 aa20.43■□□□□ 0.86
NEAT1-204ENST00000612303 MAGI3Q5TCQ9 1506 aa20.41■□□□□ 0.86
NEAT1-204ENST00000612303 SUPT6HQ7KZ85 1726 aaKnown RBP20.41■□□□□ 0.86
NEAT1-204ENST00000612303 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.4■□□□□ 0.86
NEAT1-204ENST00000612303 HNRNPUL2Q1KMD3 747 aaKnown RBP20.4■□□□□ 0.86
NEAT1-204ENST00000612303 ARID3CA6NKF2 412 aa20.38■□□□□ 0.85
NEAT1-204ENST00000612303 TROQ12816 1431 aaPredicted RBP20.37■□□□□ 0.85
NEAT1-204ENST00000612303 ARHGEF11O15085 1522 aa20.37■□□□□ 0.85
NEAT1-204ENST00000612303 RRBP1Q9P2E9 1410 aaKnown RBP20.36■□□□□ 0.85
NEAT1-204ENST00000612303 PLEKHD1A6NEE1 506 aa20.36■□□□□ 0.85
NEAT1-204ENST00000612303 KDM5BQ9UGL1 1544 aa20.36■□□□□ 0.85
NEAT1-204ENST00000612303 NCOA2Q15596 1464 aa20.35■□□□□ 0.85
NEAT1-204ENST00000612303 PHLDB1Q86UU1 1377 aa20.34■□□□□ 0.85
NEAT1-204ENST00000612303 ADCY10Q96PN6 1610 aa20.31■□□□□ 0.84
NEAT1-204ENST00000612303 CCNB3Q8WWL7 1395 aa20.3■□□□□ 0.84
NEAT1-204ENST00000612303 ZCCHC11Q5TAX3 1644 aaKnown RBP20.29■□□□□ 0.84
NEAT1-204ENST00000612303 MYOM3Q5VTT5 1437 aa20.27■□□□□ 0.84
NEAT1-204ENST00000612303 RIMBP3CA6NJZ7 1639 aa20.27■□□□□ 0.84
NEAT1-204ENST00000612303 RIMBP3BA6NNM3 1639 aa20.27■□□□□ 0.84
NEAT1-204ENST00000612303 RIMBP3Q9UFD9 1639 aa20.27■□□□□ 0.84
NEAT1-204ENST00000612303 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.27■□□□□ 0.846e-86■□□□□ 9
NEAT1-204ENST00000612303 FGD6Q6ZV73 1430 aa20.25■□□□□ 0.83
NEAT1-204ENST00000612303 KIF14Q15058 1648 aa20.24■□□□□ 0.83
NEAT1-204ENST00000612303 MIA2Q96PC5 1412 aa20.23■□□□□ 0.83
NEAT1-204ENST00000612303 NPM1P06748 294 aaKnown RBP eCLIP20.22■□□□□ 0.83
NEAT1-204ENST00000612303 ABCC10Q5T3U5 1492 aa20.2■□□□□ 0.82
NEAT1-204ENST00000612303 ITSN2Q9NZM3 1697 aa20.18■□□□□ 0.82
NEAT1-204ENST00000612303 CYB5RLQ6IPT4 315 aa20.16■□□□□ 0.82
NEAT1-204ENST00000612303 TCOF1Q13428 1488 aaKnown RBP20.16■□□□□ 0.82
NEAT1-204ENST00000612303 GPATCH8Q9UKJ3 1502 aaKnown RBP20.16■□□□□ 0.82
NEAT1-204ENST00000612303 PTPN23Q9H3S7 1636 aa20.16■□□□□ 0.82
NEAT1-204ENST00000612303 FAM50AQ14320 339 aaKnown RBP20.15■□□□□ 0.82
NEAT1-204ENST00000612303 WDR7Q9Y4E6 1490 aa20.14■□□□□ 0.81
NEAT1-204ENST00000612303 CDC42BPAQ5VT25 1732 aa20.13■□□□□ 0.81
NEAT1-204ENST00000612303 ASXL2Q76L83 1435 aa20.11■□□□□ 0.81
NEAT1-204ENST00000612303 CFDP1Q9UEE9 299 aaPredicted RBP20.11■□□□□ 0.81
NEAT1-204ENST00000612303 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.1■□□□□ 0.81
NEAT1-204ENST00000612303 KCNH8Q96L42 1107 aa20.09■□□□□ 0.81
NEAT1-204ENST00000612303 PREX2Q70Z35 1606 aa20.06■□□□□ 0.8
NEAT1-204ENST00000612303 TTC37Q6PGP7 1564 aa20.06■□□□□ 0.8
NEAT1-204ENST00000612303 MAPKBP1O60336 1514 aa20.06■□□□□ 0.8
NEAT1-204ENST00000612303 MYO5CQ9NQX4 1742 aa20.05■□□□□ 0.8
NEAT1-204ENST00000612303 CDC42BPBQ9Y5S2 1711 aa20.05■□□□□ 0.8
NEAT1-204ENST00000612303 ARAP3Q8WWN8 1544 aa20.03■□□□□ 0.8
NEAT1-204ENST00000612303 ABCA9Q8IUA7 1624 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms