RNA–Protein interactions for RNA: ENST00000612093.1

CSPG4P10-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 10, humanhuman

TSL 2 BASIC

Gene CSPG4P10, Length 3,411 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P10-202ENST00000612093 ARAP1Q96P48 1450 aa17.09■□□□□ 0.33
CSPG4P10-202ENST00000612093 ARHGAP35Q9NRY4 1499 aa17.07■□□□□ 0.32
CSPG4P10-202ENST00000612093 PBRM1Q86U86 1689 aa17.07■□□□□ 0.32
CSPG4P10-202ENST00000612093 P3H3Q8IVL6 736 aa17.04■□□□□ 0.32
CSPG4P10-202ENST00000612093 GRIN2BQ13224 1484 aa17.03■□□□□ 0.32
CSPG4P10-202ENST00000612093 EIF4G3O43432 1585 aaKnown RBP17.01■□□□□ 0.31
CSPG4P10-202ENST00000612093 APLP2Q06481 763 aa17.01■□□□□ 0.31
CSPG4P10-202ENST00000612093 ZEB1P37275 1124 aaPredicted RBP17■□□□□ 0.31
CSPG4P10-202ENST00000612093 FHAD1B1AJZ9 1412 aa16.99■□□□□ 0.31
CSPG4P10-202ENST00000612093 CTTNBP2Q8WZ74 1663 aa16.98■□□□□ 0.31
CSPG4P10-202ENST00000612093 ADAMTS12P58397 1594 aa16.98■□□□□ 0.31
CSPG4P10-202ENST00000612093 SNAPC4Q5SXM2 1469 aa16.96■□□□□ 0.31
CSPG4P10-202ENST00000612093 NEUROD1Q13562 356 aa16.96■□□□□ 0.31
CSPG4P10-202ENST00000612093 FHOD3Q2V2M9 1422 aa16.94■□□□□ 0.3
CSPG4P10-202ENST00000612093 GTF3C3Q9Y5Q9 886 aa16.92■□□□□ 0.3
CSPG4P10-202ENST00000612093 FBLN2P98095 1184 aa16.91■□□□□ 0.3
CSPG4P10-202ENST00000612093 ATP1B4Q9UN42 357 aaPredicted RBP16.89■□□□□ 0.29
CSPG4P10-202ENST00000612093 KANK4Q5T7N3 995 aaPredicted RBP16.89■□□□□ 0.29
CSPG4P10-202ENST00000612093 HNRNPUL2Q1KMD3 747 aaKnown RBP16.87■□□□□ 0.29
CSPG4P10-202ENST00000612093 DIEXFQ68CQ4 756 aaKnown RBP16.87■□□□□ 0.29
CSPG4P10-202ENST00000612093 CHMP7Q8WUX9 453 aaPredicted RBP16.86■□□□□ 0.29
CSPG4P10-202ENST00000612093 EFCAB5A4FU69 1503 aa16.86■□□□□ 0.29
CSPG4P10-202ENST00000612093 GRIN2AQ12879 1464 aa16.85■□□□□ 0.29
CSPG4P10-202ENST00000612093 MAGI1Q96QZ7 1491 aaPredicted RBP16.84■□□□□ 0.29
CSPG4P10-202ENST00000612093 IQGAP2Q13576 1575 aa16.83■□□□□ 0.28
CSPG4P10-202ENST00000612093 PCF11O94913 1555 aaKnown RBP16.82■□□□□ 0.28
CSPG4P10-202ENST00000612093 SYNJ2O15056 1496 aa16.81■□□□□ 0.28
CSPG4P10-202ENST00000612093 SAMD9Q5K651 1589 aa16.81■□□□□ 0.28
CSPG4P10-202ENST00000612093 ACIN1Q9UKV3 1341 aaKnown RBP16.76■□□□□ 0.27
CSPG4P10-202ENST00000612093 KIAA0586Q9BVV6 1533 aa16.76■□□□□ 0.27
CSPG4P10-202ENST00000612093 FMN1Q68DA7 1419 aa16.75■□□□□ 0.27
CSPG4P10-202ENST00000612093 TIAM1Q13009 1591 aa16.75■□□□□ 0.27
CSPG4P10-202ENST00000612093 CEP170Q5SW79 1584 aa16.75■□□□□ 0.27
CSPG4P10-202ENST00000612093 CASKIN1Q8WXD9 1431 aa16.74■□□□□ 0.27
CSPG4P10-202ENST00000612093 FYCO1Q9BQS8 1478 aa16.73■□□□□ 0.27
CSPG4P10-202ENST00000612093 UGGT2Q9NYU1 1516 aa16.7■□□□□ 0.26
CSPG4P10-202ENST00000612093 LRRC9Q6ZRR7 1453 aa16.69■□□□□ 0.26
CSPG4P10-202ENST00000612093 ARID3CA6NKF2 412 aa16.68■□□□□ 0.26
CSPG4P10-202ENST00000612093 NUP160Q12769 1436 aa16.68■□□□□ 0.26
CSPG4P10-202ENST00000612093 CENPBP07199 599 aaPredicted RBP16.67■□□□□ 0.26
CSPG4P10-202ENST00000612093 CFAP43Q8NDM7 1665 aa16.67■□□□□ 0.26
CSPG4P10-202ENST00000612093 MAP3K1Q13233 1512 aa16.67■□□□□ 0.26
CSPG4P10-202ENST00000612093 DISP1Q96F81 1524 aa16.67■□□□□ 0.26
CSPG4P10-202ENST00000612093 KIAA0556O60303 1618 aa16.65■□□□□ 0.26
CSPG4P10-202ENST00000612093 JPH4Q96JJ6 628 aa16.65■□□□□ 0.26
CSPG4P10-202ENST00000612093 LRRIQ1Q96JM4 1722 aa16.64■□□□□ 0.25
CSPG4P10-202ENST00000612093 CHD1O14646 1710 aa16.64■□□□□ 0.25
CSPG4P10-202ENST00000612093 PHLDB1Q86UU1 1377 aa16.6■□□□□ 0.25
CSPG4P10-202ENST00000612093 PELP1Q8IZL8 1130 aaKnown RBP16.6■□□□□ 0.25
CSPG4P10-202ENST00000612093 MTUS2Q5JR59 1369 aa16.59■□□□□ 0.25
CSPG4P10-202ENST00000612093 ITGAEP38570 1179 aa16.59■□□□□ 0.25
CSPG4P10-202ENST00000612093 RRBP1Q9P2E9 1410 aaKnown RBP16.58■□□□□ 0.24
CSPG4P10-202ENST00000612093 CCNB3Q8WWL7 1395 aa16.58■□□□□ 0.24
CSPG4P10-202ENST00000612093 CDK13Q14004 1512 aaKnown RBP16.57■□□□□ 0.24
CSPG4P10-202ENST00000612093 HECW1Q76N89 1606 aa16.57■□□□□ 0.24
CSPG4P10-202ENST00000612093 CARMIL2Q6F5E8 1435 aa16.56■□□□□ 0.24
CSPG4P10-202ENST00000612093 EPRSP07814 1512 aaKnown RBP16.55■□□□□ 0.24
CSPG4P10-202ENST00000612093 FAM50AQ14320 339 aaKnown RBP16.53■□□□□ 0.24
CSPG4P10-202ENST00000612093 MIER1Q8N108 512 aa16.53■□□□□ 0.24
CSPG4P10-202ENST00000612093 PLB1Q6P1J6 1458 aa16.53■□□□□ 0.24
CSPG4P10-202ENST00000612093 MAGI3Q5TCQ9 1506 aa16.53■□□□□ 0.24
CSPG4P10-202ENST00000612093 PRG4Q92954 1404 aaPredicted RBP16.52■□□□□ 0.24
CSPG4P10-202ENST00000612093 CCDC18Q5T9S5 1454 aa16.52■□□□□ 0.24
CSPG4P10-202ENST00000612093 NUP153P49790 1475 aaKnown RBP16.5■□□□□ 0.23
CSPG4P10-202ENST00000612093 RAPGEF6Q8TEU7 1601 aa16.5■□□□□ 0.23
CSPG4P10-202ENST00000612093 NCOA2Q15596 1464 aa16.48■□□□□ 0.23
CSPG4P10-202ENST00000612093 EHBP1L1Q8N3D4 1523 aa16.48■□□□□ 0.23
CSPG4P10-202ENST00000612093 SUPT6HQ7KZ85 1726 aaKnown RBP16.45■□□□□ 0.22
CSPG4P10-202ENST00000612093 ZNF316A6NFI3 1004 aaPredicted RBP16.44■□□□□ 0.22
CSPG4P10-202ENST00000612093 ERCC6L2Q5T890 1561 aa16.44■□□□□ 0.22
CSPG4P10-202ENST00000612093 FGD6Q6ZV73 1430 aa16.43■□□□□ 0.22
CSPG4P10-202ENST00000612093 PTPRGP23470 1445 aa16.42■□□□□ 0.22
CSPG4P10-202ENST00000612093 MYOM3Q5VTT5 1437 aa16.4■□□□□ 0.22
CSPG4P10-202ENST00000612093 SHROOM2Q13796 1616 aa16.4■□□□□ 0.22
CSPG4P10-202ENST00000612093 CLASP1Q7Z460 1538 aa16.39■□□□□ 0.21
CSPG4P10-202ENST00000612093 ABCA8O94911 1581 aa16.38■□□□□ 0.21
CSPG4P10-202ENST00000612093 CDK11AQ9UQ88 783 aaPredicted RBP16.38■□□□□ 0.21
CSPG4P10-202ENST00000612093 ARHGEF11O15085 1522 aa16.37■□□□□ 0.21
CSPG4P10-202ENST00000612093 BCANQ96GW7 911 aa16.36■□□□□ 0.21
CSPG4P10-202ENST00000612093 ATP10BO94823 1461 aa16.34■□□□□ 0.21
CSPG4P10-202ENST00000612093 TROQ12816 1431 aaPredicted RBP16.32■□□□□ 0.2
CSPG4P10-202ENST00000612093 PTPN23Q9H3S7 1636 aa16.32■□□□□ 0.2
CSPG4P10-202ENST00000612093 RAB3GAP2Q9H2M9 1393 aa16.31■□□□□ 0.2
CSPG4P10-202ENST00000612093 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.3■□□□□ 0.2
CSPG4P10-202ENST00000612093 UACAQ9BZF9 1416 aa16.3■□□□□ 0.2
CSPG4P10-202ENST00000612093 PLEKHD1A6NEE1 506 aa16.3■□□□□ 0.2
CSPG4P10-202ENST00000612093 PTPRKQ15262 1439 aa16.3■□□□□ 0.2
CSPG4P10-202ENST00000612093 KIF14Q15058 1648 aa16.3■□□□□ 0.2
CSPG4P10-202ENST00000612093 DHX57Q6P158 1386 aaKnown RBP16.28■□□□□ 0.2
CSPG4P10-202ENST00000612093 SETD5Q9C0A6 1442 aa16.28■□□□□ 0.2
CSPG4P10-202ENST00000612093 ZNF644Q9H582 1327 aaPredicted RBP16.27■□□□□ 0.2
CSPG4P10-202ENST00000612093 CHIC2Q9UKJ5 165 aa16.27■□□□□ 0.19
CSPG4P10-202ENST00000612093 OSCARQ8IYS5 282 aa16.26■□□□□ 0.19
CSPG4P10-202ENST00000612093 MIA2Q96PC5 1412 aa16.24■□□□□ 0.19
CSPG4P10-202ENST00000612093 ZNF777Q9ULD5 760 aaPredicted RBP16.24■□□□□ 0.19
CSPG4P10-202ENST00000612093 TCOF1Q13428 1488 aaKnown RBP16.24■□□□□ 0.19
CSPG4P10-202ENST00000612093 HIRIP3Q9BW71 556 aaPredicted RBP16.23■□□□□ 0.19
CSPG4P10-202ENST00000612093 ABCC2Q92887 1545 aa16.23■□□□□ 0.19
CSPG4P10-202ENST00000612093 CFDP1Q9UEE9 299 aaPredicted RBP16.23■□□□□ 0.19
CSPG4P10-202ENST00000612093 RRP7BPQ9NSQ0 103 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms