RNA–Protein interactions for RNA: ENST00000611964.1

AL049539.1-201, humanhuman

BASIC

Gene AL049539.1, Length 459 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049539.1-201ENST00000611964 GRIN2BQ13224 1484 aa9.78□□□□□ -0.84
AL049539.1-201ENST00000611964 SOGA1O94964 1423 aa9.77□□□□□ -0.85
AL049539.1-201ENST00000611964 RAD54L2Q9Y4B4 1467 aa9.77□□□□□ -0.85
AL049539.1-201ENST00000611964 KIF13AQ9H1H9 1805 aa9.75□□□□□ -0.85
AL049539.1-201ENST00000611964 C1QBPQ07021 282 aaKnown RBP9.74□□□□□ -0.85
AL049539.1-201ENST00000611964 FGD5Q6ZNL6 1462 aa9.71□□□□□ -0.86
AL049539.1-201ENST00000611964 KDM4FA0A1W2PPD8 638 aa9.7□□□□□ -0.86
AL049539.1-201ENST00000611964 ERCC6L2Q5T890 1561 aa9.68□□□□□ -0.86
AL049539.1-201ENST00000611964 PBRM1Q86U86 1689 aa9.67□□□□□ -0.86
AL049539.1-201ENST00000611964 CEP170Q5SW79 1584 aa9.67□□□□□ -0.86
AL049539.1-201ENST00000611964 KCNA4P22459 653 aa9.67□□□□□ -0.86
AL049539.1-201ENST00000611964 ABCC10Q5T3U5 1492 aa9.66□□□□□ -0.86
AL049539.1-201ENST00000611964 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.66□□□□□ -0.86
AL049539.1-201ENST00000611964 SHROOM2Q13796 1616 aa9.66□□□□□ -0.86
AL049539.1-201ENST00000611964 NUP160Q12769 1436 aa9.65□□□□□ -0.86
AL049539.1-201ENST00000611964 GRIN2AQ12879 1464 aa9.65□□□□□ -0.87
AL049539.1-201ENST00000611964 KDM6BO15054 1643 aa9.64□□□□□ -0.87
AL049539.1-201ENST00000611964 MAPKBP1O60336 1514 aa9.63□□□□□ -0.87
AL049539.1-201ENST00000611964 ABCA5Q8WWZ7 1642 aa9.63□□□□□ -0.87
AL049539.1-201ENST00000611964 CUX1P39880 1505 aa9.62□□□□□ -0.87
AL049539.1-201ENST00000611964 ABCA10Q8WWZ4 1543 aa9.61□□□□□ -0.87
AL049539.1-201ENST00000611964 FAM69CQ0P6D2 419 aa9.61□□□□□ -0.87
AL049539.1-201ENST00000611964 DIP2BQ9P265 1576 aa9.61□□□□□ -0.87
AL049539.1-201ENST00000611964 ADAMTS12P58397 1594 aa9.59□□□□□ -0.87
AL049539.1-201ENST00000611964 HECW2Q9P2P5 1572 aa9.57□□□□□ -0.88
AL049539.1-201ENST00000611964 ADGRL1O94910 1474 aa9.55□□□□□ -0.88
AL049539.1-201ENST00000611964 NPM1P06748 294 aaKnown RBP eCLIP9.55□□□□□ -0.88
AL049539.1-201ENST00000611964 PRG4Q92954 1404 aaPredicted RBP9.55□□□□□ -0.88
AL049539.1-201ENST00000611964 FBXO41Q8TF61 875 aa9.54□□□□□ -0.88
AL049539.1-201ENST00000611964 FHAD1B1AJZ9 1412 aa9.54□□□□□ -0.88
AL049539.1-201ENST00000611964 U3KPZ7 1027 aaPredicted RBP9.52□□□□□ -0.89
AL049539.1-201ENST00000611964 ADCY10Q96PN6 1610 aa9.51□□□□□ -0.89
AL049539.1-201ENST00000611964 TSPOAP1O95153 1857 aa9.5□□□□□ -0.89
AL049539.1-201ENST00000611964 JPH4Q96JJ6 628 aa9.49□□□□□ -0.89
AL049539.1-201ENST00000611964 ERICH3Q5RHP9 1530 aa9.49□□□□□ -0.89
AL049539.1-201ENST00000611964 WRNQ14191 1432 aaPredicted RBP eCLIP9.48□□□□□ -0.89
AL049539.1-201ENST00000611964 RUSC2Q8N2Y8 1516 aa9.46□□□□□ -0.89
AL049539.1-201ENST00000611964 GLI2P10070 1586 aa9.45□□□□□ -0.9
AL049539.1-201ENST00000611964 SLC4A2P04920 1241 aa9.44□□□□□ -0.9
AL049539.1-201ENST00000611964 PPRC1Q5VV67 1664 aaKnown RBP9.43□□□□□ -0.9
AL049539.1-201ENST00000611964 TOP2BQ02880 1626 aa9.43□□□□□ -0.9
AL049539.1-201ENST00000611964 PLB1Q6P1J6 1458 aa9.41□□□□□ -0.9
AL049539.1-201ENST00000611964 LMTK3Q96Q04 1460 aa9.41□□□□□ -0.9
AL049539.1-201ENST00000611964 SPINK5Q9NQ38 1064 aaPredicted RBP9.41□□□□□ -0.9
AL049539.1-201ENST00000611964 ABCC2Q92887 1545 aa9.39□□□□□ -0.91
AL049539.1-201ENST00000611964 TEX14Q8IWB6 1497 aa9.39□□□□□ -0.91
AL049539.1-201ENST00000611964 COL17A1Q9UMD9 1497 aaPredicted RBP9.38□□□□□ -0.91
AL049539.1-201ENST00000611964 BIVM-ERCC5R4GMW8 1640 aa9.38□□□□□ -0.91
AL049539.1-201ENST00000611964 KIAA0586Q9BVV6 1533 aa9.37□□□□□ -0.91
AL049539.1-201ENST00000611964 ASXL2Q76L83 1435 aa9.37□□□□□ -0.91
AL049539.1-201ENST00000611964 MAP3K4Q9Y6R4 1608 aa9.35□□□□□ -0.91
AL049539.1-201ENST00000611964 PTPRGP23470 1445 aa9.34□□□□□ -0.91
AL049539.1-201ENST00000611964 UHRF1BP1LA0JNW5 1464 aa9.34□□□□□ -0.91
AL049539.1-201ENST00000611964 SOCS7O14512 581 aa9.33□□□□□ -0.92
AL049539.1-201ENST00000611964 EPRSP07814 1512 aaKnown RBP9.32□□□□□ -0.92
AL049539.1-201ENST00000611964 CAPN15O75808 1086 aa9.32□□□□□ -0.92
AL049539.1-201ENST00000611964 DSG3P32926 999 aa9.31□□□□□ -0.92
AL049539.1-201ENST00000611964 TNIKQ9UKE5 1360 aa9.3□□□□□ -0.92
AL049539.1-201ENST00000611964 CUL7Q14999 1698 aa9.29□□□□□ -0.92
AL049539.1-201ENST00000611964 CARMIL2Q6F5E8 1435 aa9.29□□□□□ -0.92
AL049539.1-201ENST00000611964 KDM5BQ9UGL1 1544 aa9.28□□□□□ -0.92
AL049539.1-201ENST00000611964 UACAQ9BZF9 1416 aa9.27□□□□□ -0.93
AL049539.1-201ENST00000611964 PCF11O94913 1555 aaKnown RBP9.26□□□□□ -0.93
AL049539.1-201ENST00000611964 MAGI3Q5TCQ9 1506 aa9.26□□□□□ -0.93
AL049539.1-201ENST00000611964 PTPRMP28827 1452 aa9.25□□□□□ -0.93
AL049539.1-201ENST00000611964 KIF21BO75037 1637 aa9.24□□□□□ -0.93
AL049539.1-201ENST00000611964 ADAMTSL3P82987 1691 aa9.24□□□□□ -0.93
AL049539.1-201ENST00000611964 ILDR2Q71H61 639 aa9.24□□□□□ -0.93
AL049539.1-201ENST00000611964 DISP3Q9P2K9 1392 aa9.24□□□□□ -0.93
AL049539.1-201ENST00000611964 WDR7Q9Y4E6 1490 aa9.22□□□□□ -0.93
AL049539.1-201ENST00000611964 ZCCHC11Q5TAX3 1644 aaKnown RBP9.22□□□□□ -0.93
AL049539.1-201ENST00000611964 CFAP43Q8NDM7 1665 aa9.22□□□□□ -0.93
AL049539.1-201ENST00000611964 IGF1RP08069 1367 aa9.21□□□□□ -0.94
AL049539.1-201ENST00000611964 IQGAP2Q13576 1575 aa9.2□□□□□ -0.94
AL049539.1-201ENST00000611964 CD109Q6YHK3 1445 aa9.2□□□□□ -0.94
AL049539.1-201ENST00000611964 ARAP3Q8WWN8 1544 aa9.2□□□□□ -0.94
AL049539.1-201ENST00000611964 CERKQ8TCT0 537 aa9.19□□□□□ -0.94
AL049539.1-201ENST00000611964 SPATA31D1Q6ZQQ2 1576 aa9.18□□□□□ -0.94
AL049539.1-201ENST00000611964 KIF27Q86VH2 1401 aa9.18□□□□□ -0.94
AL049539.1-201ENST00000611964 DISP1Q96F81 1524 aa9.18□□□□□ -0.94
AL049539.1-201ENST00000611964 TTBK1Q5TCY1 1321 aaPredicted RBP9.17□□□□□ -0.94
AL049539.1-201ENST00000611964 PHLDB1Q86UU1 1377 aa9.16□□□□□ -0.94
AL049539.1-201ENST00000611964 ABCB7O75027 752 aa9.16□□□□□ -0.94
AL049539.1-201ENST00000611964 BCORL1Q5H9F3 1711 aa9.16□□□□□ -0.94
AL049539.1-201ENST00000611964 UGGT2Q9NYU1 1516 aa9.15□□□□□ -0.95
AL049539.1-201ENST00000611964 MADDQ8WXG6 1647 aa9.14□□□□□ -0.95
AL049539.1-201ENST00000611964 CARMIL1Q5VZK9 1371 aa9.13□□□□□ -0.95
AL049539.1-201ENST00000611964 KIAA0556O60303 1618 aa9.12□□□□□ -0.95
AL049539.1-201ENST00000611964 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.11□□□□□ -0.95
AL049539.1-201ENST00000611964 HNRNPUL2Q1KMD3 747 aaKnown RBP9.11□□□□□ -0.95
AL049539.1-201ENST00000611964 ZNF219Q9P2Y4 722 aaPredicted RBP9.11□□□□□ -0.95
AL049539.1-201ENST00000611964 APLP2Q06481 763 aa9.09□□□□□ -0.95
AL049539.1-201ENST00000611964 SAMD1Q6SPF0 538 aaPredicted RBP9.09□□□□□ -0.95
AL049539.1-201ENST00000611964 RIMS1Q86UR5 1692 aaKnown RBP9.09□□□□□ -0.95
AL049539.1-201ENST00000611964 HSPA2P54652 639 aa9.08□□□□□ -0.96
AL049539.1-201ENST00000611964 ARHGEF40Q8TER5 1519 aa9.08□□□□□ -0.96
AL049539.1-201ENST00000611964 NEO1Q92859 1461 aa9.08□□□□□ -0.96
AL049539.1-201ENST00000611964 ABCA8O94911 1581 aa9.07□□□□□ -0.96
AL049539.1-201ENST00000611964 SLC4A1APQ9BWU0 796 aaKnown RBP9.07□□□□□ -0.96
AL049539.1-201ENST00000611964 ABCA9Q8IUA7 1624 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms