RNA–Protein interactions for RNA: ENST00000611855.4

CDH4-202, Transcript of cadherin 4, humanhuman

TSL 5 BASIC

Gene CDH4, Length 3,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-202ENST00000611855 MAPKBP1O60336 1514 aa15.55■□□□□ 0.08
CDH4-202ENST00000611855 TOP2BQ02880 1626 aa15.54■□□□□ 0.08
CDH4-202ENST00000611855 ARHGAP35Q9NRY4 1499 aa15.51■□□□□ 0.07
CDH4-202ENST00000611855 ANP32CO43423 234 aa15.51■□□□□ 0.07
CDH4-202ENST00000611855 PPP1R15AO75807 674 aaPredicted RBP15.5■□□□□ 0.07
CDH4-202ENST00000611855 PEG3Q9GZU2 1588 aa15.5■□□□□ 0.07
CDH4-202ENST00000611855 ERICH3Q5RHP9 1530 aa15.48■□□□□ 0.07
CDH4-202ENST00000611855 SETD5Q9C0A6 1442 aa15.48■□□□□ 0.07
CDH4-202ENST00000611855 CUX2O14529 1486 aa15.48■□□□□ 0.07
CDH4-202ENST00000611855 KIF27Q86VH2 1401 aa15.46■□□□□ 0.07
CDH4-202ENST00000611855 PHLDB1Q86UU1 1377 aa15.45■□□□□ 0.06
CDH4-202ENST00000611855 CDK11AQ9UQ88 783 aaPredicted RBP15.45■□□□□ 0.06
CDH4-202ENST00000611855 DEKP35659 375 aaKnown RBP15.43■□□□□ 0.06
CDH4-202ENST00000611855 CUX1P39880 1505 aa15.42■□□□□ 0.06
CDH4-202ENST00000611855 HNRNPUQ00839 825 aaKnown RBP eCLIP15.42■□□□□ 0.06
CDH4-202ENST00000611855 NBR1Q14596 966 aa15.41■□□□□ 0.06
CDH4-202ENST00000611855 BIVM-ERCC5R4GMW8 1640 aa15.4■□□□□ 0.06
CDH4-202ENST00000611855 DNAJC5BQ9UF47 199 aa15.4■□□□□ 0.06
CDH4-202ENST00000611855 CCER2I3L3R5 266 aa15.37■□□□□ 0.05
CDH4-202ENST00000611855 ANO8Q9HCE9 1232 aaPredicted RBP15.37■□□□□ 0.05
CDH4-202ENST00000611855 TIAM1Q13009 1591 aa15.34■□□□□ 0.05
CDH4-202ENST00000611855 TONSLQ96HA7 1378 aa15.34■□□□□ 0.05
CDH4-202ENST00000611855 FANCIQ9NVI1 1328 aa15.34■□□□□ 0.05
CDH4-202ENST00000611855 LRRC9Q6ZRR7 1453 aa15.33■□□□□ 0.05
CDH4-202ENST00000611855 CNGB1Q14028 1251 aaPredicted RBP15.3■□□□□ 0.04
CDH4-202ENST00000611855 IGF1RP08069 1367 aa15.3■□□□□ 0.04
CDH4-202ENST00000611855 CARMIL1Q5VZK9 1371 aa15.28■□□□□ 0.04
CDH4-202ENST00000611855 NCAPD3P42695 1498 aa15.27■□□□□ 0.04
CDH4-202ENST00000611855 CC2D2AQ9P2K1 1620 aa15.27■□□□□ 0.04
CDH4-202ENST00000611855 CCDC184Q52MB2 194 aa15.27■□□□□ 0.03
CDH4-202ENST00000611855 SENP3-EIF4A1A0A087X0R7 540 aa15.26■□□□□ 0.03
CDH4-202ENST00000611855 FHOD3Q2V2M9 1422 aa15.26■□□□□ 0.03
CDH4-202ENST00000611855 B4GALNT3Q6L9W6 998 aa15.25■□□□□ 0.03
CDH4-202ENST00000611855 FAM9BQ8IZU0 186 aa15.25■□□□□ 0.03
CDH4-202ENST00000611855 RTN4Q9NQC3 1192 aaKnown RBP15.24■□□□□ 0.03
CDH4-202ENST00000611855 CCDC136Q96JN2 1154 aa15.24■□□□□ 0.03
CDH4-202ENST00000611855 TIMELESSQ9UNS1 1208 aa15.22■□□□□ 0.03
CDH4-202ENST00000611855 SALL2Q9Y467 1007 aaPredicted RBP15.22■□□□□ 0.03
CDH4-202ENST00000611855 MYT1LQ9UL68 1186 aa15.21■□□□□ 0.03
CDH4-202ENST00000611855 PCF11O94913 1555 aaKnown RBP15.21■□□□□ 0.03
CDH4-202ENST00000611855 CHIC2Q9UKJ5 165 aa15.2■□□□□ 0.02
CDH4-202ENST00000611855 PAK3O75914 559 aaPredicted RBP15.19■□□□□ 0.02
CDH4-202ENST00000611855 HSPA5P11021 654 aaKnown RBP15.19■□□□□ 0.02
CDH4-202ENST00000611855 RRP7BPQ9NSQ0 103 aa15.18■□□□□ 0.02
CDH4-202ENST00000611855 WASHC2AQ641Q2 1341 aa15.18■□□□□ 0.02
CDH4-202ENST00000611855 NOP58Q9Y2X3 529 aaKnown RBP15.18■□□□□ 0.02
CDH4-202ENST00000611855 CCDC18Q5T9S5 1454 aa15.17■□□□□ 0.02
CDH4-202ENST00000611855 FHAD1B1AJZ9 1412 aa15.17■□□□□ 0.02
CDH4-202ENST00000611855 PTPRKQ15262 1439 aa15.16■□□□□ 0.02
CDH4-202ENST00000611855 RTL5Q5HYW3 569 aaPredicted RBP15.15■□□□□ 0.02
CDH4-202ENST00000611855 CFTRP13569 1480 aa15.15■□□□□ 0.02
CDH4-202ENST00000611855 FOXD1Q16676 465 aa15.15■□□□□ 0.02
CDH4-202ENST00000611855 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.14■□□□□ 0.01
CDH4-202ENST00000611855 MAP3K1Q13233 1512 aa15.14■□□□□ 0.01
CDH4-202ENST00000611855 PPP4R2Q9NY27 417 aa15.14■□□□□ 0.01
CDH4-202ENST00000611855 AQRO60306 1485 aaKnown RBP eCLIP15.13■□□□□ 0.01
CDH4-202ENST00000611855 MRS2Q9HD23 443 aa15.13■□□□□ 0.01
CDH4-202ENST00000611855 HMGXB3Q12766 1538 aa15.13■□□□□ 0.01
CDH4-202ENST00000611855 FGD5Q6ZNL6 1462 aa15.13■□□□□ 0.01
CDH4-202ENST00000611855 MTUS2Q5JR59 1369 aa15.12■□□□□ 0.01
CDH4-202ENST00000611855 IL27Q8NEV9 243 aa15.12■□□□□ 0.01
CDH4-202ENST00000611855 ARID3CA6NKF2 412 aa15.11■□□□□ 0.01
CDH4-202ENST00000611855 C11orf95C9JLR9 678 aaPredicted RBP15.11■□□□□ 0.01
CDH4-202ENST00000611855 FGD6Q6ZV73 1430 aa15.11■□□□□ 0.01
CDH4-202ENST00000611855 POLR3GLQ9BT43 218 aa15.1■□□□□ 0.01
CDH4-202ENST00000611855 CFAP43Q8NDM7 1665 aa15.09■□□□□ 0.01
CDH4-202ENST00000611855 UACAQ9BZF9 1416 aa15.08■□□□□ 0
CDH4-202ENST00000611855 EIF4G2P78344 907 aaKnown RBP eCLIP15.07■□□□□ 0
CDH4-202ENST00000611855 NESP48681 1621 aa15.07■□□□□ 0
CDH4-202ENST00000611855 RAD54L2Q9Y4B4 1467 aa15.05■□□□□ 0
CDH4-202ENST00000611855 PRKRIP1Q9H875 184 aaPredicted RBP15.04■□□□□ -0
CDH4-202ENST00000611855 NAIPQ13075 1403 aa15.04■□□□□ -0
CDH4-202ENST00000611855 CADPSQ9ULU8 1353 aa15.04■□□□□ -0
CDH4-202ENST00000611855 L3MBTL2Q969R5 705 aa15.04■□□□□ -0
CDH4-202ENST00000611855 HFM1A2PYH4 1435 aa15.03■□□□□ -0
CDH4-202ENST00000611855 ANP32AP39687 249 aaKnown RBP15.03■□□□□ -0
CDH4-202ENST00000611855 PTPN23Q9H3S7 1636 aa15.03■□□□□ -0
CDH4-202ENST00000611855 CASKIN1Q8WXD9 1431 aa15.02■□□□□ -0
CDH4-202ENST00000611855 NPM2Q86SE8 214 aaKnown RBP15.02■□□□□ -0
CDH4-202ENST00000611855 ZBTB47Q9UFB7 747 aaPredicted RBP15.02■□□□□ -0
CDH4-202ENST00000611855 FYCO1Q9BQS8 1478 aa15.02□□□□□ -0.01
CDH4-202ENST00000611855 KDM5BQ9UGL1 1544 aa15.01□□□□□ -0.01
CDH4-202ENST00000611855 AKNAQ7Z591 1439 aa14.99□□□□□ -0.01
CDH4-202ENST00000611855 CNTLNQ9NXG0 1405 aa14.99□□□□□ -0.01
CDH4-202ENST00000611855 FMN1Q68DA7 1419 aa14.98□□□□□ -0.01
CDH4-202ENST00000611855 ZNF326Q5BKZ1 582 aaKnown RBP14.97□□□□□ -0.01
CDH4-202ENST00000611855 NCOA2Q15596 1464 aa14.97□□□□□ -0.01
CDH4-202ENST00000611855 LAS1LQ9Y4W2 734 aaKnown RBP14.97□□□□□ -0.01
CDH4-202ENST00000611855 NBPF8Q3BBV2 869 aa14.97□□□□□ -0.01
CDH4-202ENST00000611855 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.97□□□□□ -0.01
CDH4-202ENST00000611855 ZBED9Q6R2W3 1325 aa14.96□□□□□ -0.01
CDH4-202ENST00000611855 CCDC7Q96M83 1385 aa14.96□□□□□ -0.01
CDH4-202ENST00000611855 MPHOSPH9Q99550 1183 aa14.96□□□□□ -0.01
CDH4-202ENST00000611855 EIF5BO60841 1220 aaKnown RBP14.95□□□□□ -0.02
CDH4-202ENST00000611855 ERICH6BQ5W0A0 696 aa14.95□□□□□ -0.02
CDH4-202ENST00000611855 IPO9Q96P70 1041 aaKnown RBP14.95□□□□□ -0.02
CDH4-202ENST00000611855 MYOM3Q5VTT5 1437 aa14.94□□□□□ -0.02
CDH4-202ENST00000611855 KIF7Q2M1P5 1343 aa14.93□□□□□ -0.02
CDH4-202ENST00000611855 DENND4BO75064 1496 aaPredicted RBP14.91□□□□□ -0.02
CDH4-202ENST00000611855 KDM6BO15054 1643 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms