RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-223ENST00000611614 SNAPC4Q5SXM2 1469 aa21.26■□□□□ 0.99
COPS7B-223ENST00000611614 MAGI1Q96QZ7 1491 aaPredicted RBP21.24■□□□□ 0.99
COPS7B-223ENST00000611614 VPS8Q8N3P4 1428 aa21.23■□□□□ 0.99
COPS7B-223ENST00000611614 CHMP7Q8WUX9 453 aaPredicted RBP21.21■□□□□ 0.99
COPS7B-223ENST00000611614 APLP2Q06481 763 aa21.2■□□□□ 0.98
COPS7B-223ENST00000611614 CTTNBP2Q8WZ74 1663 aa21.19■□□□□ 0.98
COPS7B-223ENST00000611614 ARHGAP35Q9NRY4 1499 aa21.19■□□□□ 0.98
COPS7B-223ENST00000611614 FBLN2P98095 1184 aa21.18■□□□□ 0.98
COPS7B-223ENST00000611614 ARAP1Q96P48 1450 aa21.16■□□□□ 0.98
COPS7B-223ENST00000611614 SYNJ2O15056 1496 aa21.16■□□□□ 0.98
COPS7B-223ENST00000611614 GRIN2AQ12879 1464 aa21.13■□□□□ 0.97
COPS7B-223ENST00000611614 EFCAB5A4FU69 1503 aa21.11■□□□□ 0.97
COPS7B-223ENST00000611614 P3H3Q8IVL6 736 aa21.11■□□□□ 0.97
COPS7B-223ENST00000611614 TTBK1Q5TCY1 1321 aaPredicted RBP21.11■□□□□ 0.97
COPS7B-223ENST00000611614 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.06■□□□□ 0.96
COPS7B-223ENST00000611614 IQGAP2Q13576 1575 aa21.06■□□□□ 0.96
COPS7B-223ENST00000611614 KIAA0586Q9BVV6 1533 aa21.05■□□□□ 0.96
COPS7B-223ENST00000611614 CCER1Q8TC90 406 aaPredicted RBP21.04■□□□□ 0.96
COPS7B-223ENST00000611614 PELP1Q8IZL8 1130 aaKnown RBP21.03■□□□□ 0.96
COPS7B-223ENST00000611614 FHOD3Q2V2M9 1422 aa21.02■□□□□ 0.96
COPS7B-223ENST00000611614 FMN1Q68DA7 1419 aa20.99■□□□□ 0.95
COPS7B-223ENST00000611614 SAMD9Q5K651 1589 aa20.97■□□□□ 0.95
COPS7B-223ENST00000611614 ATP1B4Q9UN42 357 aaPredicted RBP20.97■□□□□ 0.95
COPS7B-223ENST00000611614 NUP160Q12769 1436 aa20.96■□□□□ 0.95
COPS7B-223ENST00000611614 CEP170Q5SW79 1584 aa20.95■□□□□ 0.94
COPS7B-223ENST00000611614 UGGT2Q9NYU1 1516 aa20.95■□□□□ 0.94
COPS7B-223ENST00000611614 JPH4Q96JJ6 628 aa20.9■□□□□ 0.94
COPS7B-223ENST00000611614 CASKIN1Q8WXD9 1431 aa20.88■□□□□ 0.93
COPS7B-223ENST00000611614 FYCO1Q9BQS8 1478 aa20.88■□□□□ 0.93
COPS7B-223ENST00000611614 CARMIL2Q6F5E8 1435 aa20.86■□□□□ 0.93
COPS7B-223ENST00000611614 PCF11O94913 1555 aaKnown RBP20.86■□□□□ 0.93
COPS7B-223ENST00000611614 CHD1O14646 1710 aa20.85■□□□□ 0.93
COPS7B-223ENST00000611614 MAP3K1Q13233 1512 aa20.84■□□□□ 0.93
COPS7B-223ENST00000611614 KANK4Q5T7N3 995 aaPredicted RBP20.83■□□□□ 0.92
COPS7B-223ENST00000611614 DISP1Q96F81 1524 aa20.82■□□□□ 0.92
COPS7B-223ENST00000611614 KIAA0556O60303 1618 aa20.82■□□□□ 0.92
COPS7B-223ENST00000611614 TIAM1Q13009 1591 aa20.8■□□□□ 0.92
COPS7B-223ENST00000611614 SCAF1Q9H7N4 1312 aaKnown RBP20.76■□□□□ 0.91
COPS7B-223ENST00000611614 HNRNPUL2Q1KMD3 747 aaKnown RBP20.73■□□□□ 0.91
COPS7B-223ENST00000611614 LRRC9Q6ZRR7 1453 aa20.73■□□□□ 0.91
COPS7B-223ENST00000611614 PRG4Q92954 1404 aaPredicted RBP20.73■□□□□ 0.91
COPS7B-223ENST00000611614 CFAP43Q8NDM7 1665 aa20.71■□□□□ 0.91
COPS7B-223ENST00000611614 HECW1Q76N89 1606 aa20.71■□□□□ 0.91
COPS7B-223ENST00000611614 CCDC18Q5T9S5 1454 aa20.7■□□□□ 0.9
COPS7B-223ENST00000611614 MTUS2Q5JR59 1369 aa20.69■□□□□ 0.9
COPS7B-223ENST00000611614 EPRSP07814 1512 aaKnown RBP20.64■□□□□ 0.89
COPS7B-223ENST00000611614 PTPRGP23470 1445 aa20.63■□□□□ 0.89
COPS7B-223ENST00000611614 ARID3CA6NKF2 412 aa20.63■□□□□ 0.89
COPS7B-223ENST00000611614 SHROOM2Q13796 1616 aa20.63■□□□□ 0.89
COPS7B-223ENST00000611614 RAPGEF6Q8TEU7 1601 aa20.63■□□□□ 0.89
COPS7B-223ENST00000611614 CLASP1Q7Z460 1538 aa20.62■□□□□ 0.89
COPS7B-223ENST00000611614 OSCARQ8IYS5 282 aa20.61■□□□□ 0.89
COPS7B-223ENST00000611614 CDK11AQ9UQ88 783 aaPredicted RBP20.61■□□□□ 0.89
COPS7B-223ENST00000611614 PLB1Q6P1J6 1458 aa20.6■□□□□ 0.89
COPS7B-223ENST00000611614 NUP153P49790 1475 aaKnown RBP20.58■□□□□ 0.88
COPS7B-223ENST00000611614 LRRIQ1Q96JM4 1722 aa20.57■□□□□ 0.88
COPS7B-223ENST00000611614 ACIN1Q9UKV3 1341 aaKnown RBP20.56■□□□□ 0.88
COPS7B-223ENST00000611614 CDK13Q14004 1512 aaKnown RBP20.56■□□□□ 0.88
COPS7B-223ENST00000611614 EHBP1L1Q8N3D4 1523 aa20.56■□□□□ 0.88
COPS7B-223ENST00000611614 CCNB3Q8WWL7 1395 aa20.56■□□□□ 0.88
COPS7B-223ENST00000611614 RRBP1Q9P2E9 1410 aaKnown RBP20.56■□□□□ 0.88
COPS7B-223ENST00000611614 PHLDB1Q86UU1 1377 aa20.54■□□□□ 0.88
COPS7B-223ENST00000611614 ABCA8O94911 1581 aa20.51■□□□□ 0.87
COPS7B-223ENST00000611614 DIEXFQ68CQ4 756 aaKnown RBP20.5■□□□□ 0.87
COPS7B-223ENST00000611614 SUPT6HQ7KZ85 1726 aaKnown RBP20.5■□□□□ 0.87
COPS7B-223ENST00000611614 NCOA2Q15596 1464 aa20.49■□□□□ 0.87
COPS7B-223ENST00000611614 ERCC6L2Q5T890 1561 aa20.48■□□□□ 0.87
COPS7B-223ENST00000611614 UACAQ9BZF9 1416 aa20.48■□□□□ 0.87
COPS7B-223ENST00000611614 CENPBP07199 599 aaPredicted RBP20.48■□□□□ 0.87
COPS7B-223ENST00000611614 FAM50AQ14320 339 aaKnown RBP20.48■□□□□ 0.87
COPS7B-223ENST00000611614 MAGI3Q5TCQ9 1506 aa20.47■□□□□ 0.87
COPS7B-223ENST00000611614 PLEKHD1A6NEE1 506 aa20.46■□□□□ 0.87
COPS7B-223ENST00000611614 ZNF316A6NFI3 1004 aaPredicted RBP20.46■□□□□ 0.87
COPS7B-223ENST00000611614 ITGAEP38570 1179 aa20.43■□□□□ 0.86
COPS7B-223ENST00000611614 CLSPNQ9HAW4 1339 aa20.43■□□□□ 0.86
COPS7B-223ENST00000611614 MYOM3Q5VTT5 1437 aa20.42■□□□□ 0.86
COPS7B-223ENST00000611614 ATP10BO94823 1461 aa20.42■□□□□ 0.86
COPS7B-223ENST00000611614 TROQ12816 1431 aaPredicted RBP20.42■□□□□ 0.86
COPS7B-223ENST00000611614 FGD6Q6ZV73 1430 aa20.41■□□□□ 0.86
COPS7B-223ENST00000611614 NEUROD1Q13562 356 aa20.4■□□□□ 0.86
COPS7B-223ENST00000611614 DHX57Q6P158 1386 aaKnown RBP20.4■□□□□ 0.86
COPS7B-223ENST00000611614 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.38■□□□□ 0.853e-6■■■■□ 26.4
COPS7B-223ENST00000611614 ABCC2Q92887 1545 aa20.38■□□□□ 0.85
COPS7B-223ENST00000611614 ARHGEF11O15085 1522 aa20.38■□□□□ 0.85
COPS7B-223ENST00000611614 UHRF1BP1LA0JNW5 1464 aa20.33■□□□□ 0.85
COPS7B-223ENST00000611614 MIA2Q96PC5 1412 aa20.32■□□□□ 0.84
COPS7B-223ENST00000611614 KIF14Q15058 1648 aa20.28■□□□□ 0.84
COPS7B-223ENST00000611614 PTPN23Q9H3S7 1636 aa20.27■□□□□ 0.84
COPS7B-223ENST00000611614 CFDP1Q9UEE9 299 aaPredicted RBP20.27■□□□□ 0.84
COPS7B-223ENST00000611614 ADCY10Q96PN6 1610 aa20.27■□□□□ 0.83
COPS7B-223ENST00000611614 KDM5BQ9UGL1 1544 aa20.25■□□□□ 0.83
COPS7B-223ENST00000611614 GTF3C3Q9Y5Q9 886 aa20.24■□□□□ 0.83
COPS7B-223ENST00000611614 TCOF1Q13428 1488 aaKnown RBP20.23■□□□□ 0.83
COPS7B-223ENST00000611614 NPM1P06748 294 aaKnown RBP eCLIP20.22■□□□□ 0.83
COPS7B-223ENST00000611614 GPATCH8Q9UKJ3 1502 aaKnown RBP20.21■□□□□ 0.83
COPS7B-223ENST00000611614 ITSN2Q9NZM3 1697 aa20.21■□□□□ 0.83
COPS7B-223ENST00000611614 KCNH8Q96L42 1107 aa20.2■□□□□ 0.82
COPS7B-223ENST00000611614 ZCCHC11Q5TAX3 1644 aaKnown RBP20.2■□□□□ 0.82
COPS7B-223ENST00000611614 ZNF777Q9ULD5 760 aaPredicted RBP20.2■□□□□ 0.82
COPS7B-223ENST00000611614 RAB3GAP2Q9H2M9 1393 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms