RNA–Protein interactions for RNA: ENST00000611578.4

EPHB6-207, Transcript of EPH receptor B6, humanhuman

TSL 1 (best)

Gene EPHB6, Length 3,224 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB6-207ENST00000611578 NBR1Q14596 966 aa18.25■□□□□ 0.51
EPHB6-207ENST00000611578 HMGXB3Q12766 1538 aa18.25■□□□□ 0.51
EPHB6-207ENST00000611578 KIF21BO75037 1637 aa18.25■□□□□ 0.51
EPHB6-207ENST00000611578 MSH5O43196 834 aa18.21■□□□□ 0.51
EPHB6-207ENST00000611578 CUX1P39880 1505 aa18.2■□□□□ 0.5
EPHB6-207ENST00000611578 CFTRP13569 1480 aa18.17■□□□□ 0.5
EPHB6-207ENST00000611578 KIF27Q86VH2 1401 aa18.16■□□□□ 0.5
EPHB6-207ENST00000611578 RAB3GAP2Q9H2M9 1393 aa18.14■□□□□ 0.49
EPHB6-207ENST00000611578 BIVM-ERCC5R4GMW8 1640 aa18.12■□□□□ 0.49
EPHB6-207ENST00000611578 POLR3GLQ9BT43 218 aa18.12■□□□□ 0.49
EPHB6-207ENST00000611578 CCNB3Q8WWL7 1395 aa18.12■□□□□ 0.49
EPHB6-207ENST00000611578 FAM9BQ8IZU0 186 aa18.11■□□□□ 0.49
EPHB6-207ENST00000611578 B4GALNT3Q6L9W6 998 aa18.1■□□□□ 0.49
EPHB6-207ENST00000611578 CADPSQ9ULU8 1353 aa18.09■□□□□ 0.49
EPHB6-207ENST00000611578 PRXQ9BXM0 1461 aa18.08■□□□□ 0.49
EPHB6-207ENST00000611578 CUX2O14529 1486 aa18.07■□□□□ 0.48
EPHB6-207ENST00000611578 CC2D2AQ9P2K1 1620 aa18.04■□□□□ 0.48
EPHB6-207ENST00000611578 DEKP35659 375 aaKnown RBP18.04■□□□□ 0.48
EPHB6-207ENST00000611578 TONSLQ96HA7 1378 aa18■□□□□ 0.47
EPHB6-207ENST00000611578 PPP1R15AO75807 674 aaPredicted RBP18■□□□□ 0.47
EPHB6-207ENST00000611578 ERICH3Q5RHP9 1530 aa17.99■□□□□ 0.47
EPHB6-207ENST00000611578 ARAP1Q96P48 1450 aa17.99■□□□□ 0.47
EPHB6-207ENST00000611578 RTN4Q9NQC3 1192 aaKnown RBP17.98■□□□□ 0.47
EPHB6-207ENST00000611578 FGD5Q6ZNL6 1462 aa17.97■□□□□ 0.47
EPHB6-207ENST00000611578 IGF1RP08069 1367 aa17.96■□□□□ 0.47
EPHB6-207ENST00000611578 NPM2Q86SE8 214 aaKnown RBP17.96■□□□□ 0.47
EPHB6-207ENST00000611578 WDR97A6NE52 1622 aa17.94■□□□□ 0.46
EPHB6-207ENST00000611578 CARMIL1Q5VZK9 1371 aa17.94■□□□□ 0.46
EPHB6-207ENST00000611578 NESP48681 1621 aa17.93■□□□□ 0.46
EPHB6-207ENST00000611578 CCER2I3L3R5 266 aa17.93■□□□□ 0.46
EPHB6-207ENST00000611578 FANCD2Q9BXW9 1451 aa17.92■□□□□ 0.46
EPHB6-207ENST00000611578 RTL5Q5HYW3 569 aaPredicted RBP17.92■□□□□ 0.46
EPHB6-207ENST00000611578 SETD5Q9C0A6 1442 aa17.91■□□□□ 0.46
EPHB6-207ENST00000611578 DNAJC5BQ9UF47 199 aa17.9■□□□□ 0.46
EPHB6-207ENST00000611578 CHIC2Q9UKJ5 165 aa17.9■□□□□ 0.46
EPHB6-207ENST00000611578 MRS2Q9HD23 443 aa17.89■□□□□ 0.45
EPHB6-207ENST00000611578 ARHGAP35Q9NRY4 1499 aa17.89■□□□□ 0.45
EPHB6-207ENST00000611578 RAD54L2Q9Y4B4 1467 aa17.88■□□□□ 0.45
EPHB6-207ENST00000611578 ARID3CA6NKF2 412 aa17.86■□□□□ 0.45
EPHB6-207ENST00000611578 CCDC184Q52MB2 194 aa17.86■□□□□ 0.45
EPHB6-207ENST00000611578 PPP4R2Q9NY27 417 aa17.85■□□□□ 0.45
EPHB6-207ENST00000611578 FANCIQ9NVI1 1328 aa17.83■□□□□ 0.45
EPHB6-207ENST00000611578 PAK3O75914 559 aaPredicted RBP17.83■□□□□ 0.45
EPHB6-207ENST00000611578 NOP58Q9Y2X3 529 aaKnown RBP17.83■□□□□ 0.44
EPHB6-207ENST00000611578 SALL2Q9Y467 1007 aaPredicted RBP17.83■□□□□ 0.44
EPHB6-207ENST00000611578 ZNF326Q5BKZ1 582 aaKnown RBP17.82■□□□□ 0.44
EPHB6-207ENST00000611578 RRBP1Q9P2E9 1410 aaKnown RBP17.82■□□□□ 0.44
EPHB6-207ENST00000611578 PRDM2Q13029 1718 aa17.81■□□□□ 0.44
EPHB6-207ENST00000611578 RRP7BPQ9NSQ0 103 aa17.81■□□□□ 0.44
EPHB6-207ENST00000611578 CCDC136Q96JN2 1154 aa17.8■□□□□ 0.44
EPHB6-207ENST00000611578 ANO8Q9HCE9 1232 aaPredicted RBP17.79■□□□□ 0.44
EPHB6-207ENST00000611578 ANP32AP39687 249 aaKnown RBP17.79■□□□□ 0.44
EPHB6-207ENST00000611578 PHLDB1Q86UU1 1377 aa17.78■□□□□ 0.44
EPHB6-207ENST00000611578 HSPA5P11021 654 aaKnown RBP17.77■□□□□ 0.44
EPHB6-207ENST00000611578 FOXD1Q16676 465 aa17.77■□□□□ 0.44
EPHB6-207ENST00000611578 ZBTB47Q9UFB7 747 aaPredicted RBP17.76■□□□□ 0.43
EPHB6-207ENST00000611578 MAPKBP1O60336 1514 aa17.76■□□□□ 0.43
EPHB6-207ENST00000611578 TDRD9Q8NDG6 1382 aaKnown RBP17.75■□□□□ 0.43
EPHB6-207ENST00000611578 POLA1P09884 1462 aaPredicted RBP17.75■□□□□ 0.43
EPHB6-207ENST00000611578 LAS1LQ9Y4W2 734 aaKnown RBP17.75■□□□□ 0.43
EPHB6-207ENST00000611578 TOPBP1Q92547 1522 aa17.74■□□□□ 0.43
EPHB6-207ENST00000611578 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.73■□□□□ 0.43
EPHB6-207ENST00000611578 FHOD3Q2V2M9 1422 aa17.72■□□□□ 0.43
EPHB6-207ENST00000611578 EIF4G2P78344 907 aaKnown RBP eCLIP17.7■□□□□ 0.42
EPHB6-207ENST00000611578 DNMBPQ6XZF7 1577 aa17.7■□□□□ 0.42
EPHB6-207ENST00000611578 WASHC2AQ641Q2 1341 aa17.66■□□□□ 0.42
EPHB6-207ENST00000611578 IL27Q8NEV9 243 aa17.65■□□□□ 0.42
EPHB6-207ENST00000611578 ABCA10Q8WWZ4 1543 aa17.64■□□□□ 0.42
EPHB6-207ENST00000611578 MYT1LQ9UL68 1186 aa17.64■□□□□ 0.41
EPHB6-207ENST00000611578 EIF5BO60841 1220 aaKnown RBP17.63■□□□□ 0.41
EPHB6-207ENST00000611578 TIMELESSQ9UNS1 1208 aa17.63■□□□□ 0.41
EPHB6-207ENST00000611578 URB2Q14146 1524 aaKnown RBP17.63■□□□□ 0.41
EPHB6-207ENST00000611578 FHAD1B1AJZ9 1412 aa17.63■□□□□ 0.41
EPHB6-207ENST00000611578 TIAM1Q13009 1591 aa17.61■□□□□ 0.41
EPHB6-207ENST00000611578 MTUS2Q5JR59 1369 aa17.6■□□□□ 0.41
EPHB6-207ENST00000611578 PDS5BQ9NTI5 1447 aa17.6■□□□□ 0.41
EPHB6-207ENST00000611578 LRRC9Q6ZRR7 1453 aa17.6■□□□□ 0.41
EPHB6-207ENST00000611578 NEFMP07197 916 aa17.58■□□□□ 0.41
EPHB6-207ENST00000611578 C11orf95C9JLR9 678 aaPredicted RBP17.58■□□□□ 0.4
EPHB6-207ENST00000611578 PRKRIP1Q9H875 184 aaPredicted RBP17.58■□□□□ 0.4
EPHB6-207ENST00000611578 PCF11O94913 1555 aaKnown RBP17.56■□□□□ 0.4
EPHB6-207ENST00000611578 IPO9Q96P70 1041 aaKnown RBP17.56■□□□□ 0.4
EPHB6-207ENST00000611578 LAMC3Q9Y6N6 1575 aa17.55■□□□□ 0.4
EPHB6-207ENST00000611578 L3MBTL2Q969R5 705 aa17.55■□□□□ 0.4
EPHB6-207ENST00000611578 AKNAQ7Z591 1439 aa17.55■□□□□ 0.4
EPHB6-207ENST00000611578 GAPVD1Q14C86 1478 aa17.55■□□□□ 0.4
EPHB6-207ENST00000611578 TMC1Q8TDI8 760 aa17.53■□□□□ 0.4
EPHB6-207ENST00000611578 DAXXQ9UER7 740 aaPredicted RBP17.5■□□□□ 0.39
EPHB6-207ENST00000611578 CCDC18Q5T9S5 1454 aa17.49■□□□□ 0.39
EPHB6-207ENST00000611578 ERICH6BQ5W0A0 696 aa17.47■□□□□ 0.39
EPHB6-207ENST00000611578 SKAP1Q86WV1 359 aa17.47■□□□□ 0.39
EPHB6-207ENST00000611578 CUL7Q14999 1698 aa17.47■□□□□ 0.39
EPHB6-207ENST00000611578 ZBED9Q6R2W3 1325 aa17.46■□□□□ 0.39
EPHB6-207ENST00000611578 AQRO60306 1485 aaKnown RBP eCLIP17.46■□□□□ 0.392e-7■■■□□ 15
EPHB6-207ENST00000611578 SLC4A3P48751 1232 aa17.46■□□□□ 0.39
EPHB6-207ENST00000611578 FMN1Q68DA7 1419 aa17.46■□□□□ 0.39
EPHB6-207ENST00000611578 CASKIN1Q8WXD9 1431 aa17.46■□□□□ 0.39
EPHB6-207ENST00000611578 KIF21AQ7Z4S6 1674 aa17.45■□□□□ 0.38
EPHB6-207ENST00000611578 MAP3K1Q13233 1512 aa17.45■□□□□ 0.38
EPHB6-207ENST00000611578 FYCO1Q9BQS8 1478 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms