RNA–Protein interactions for RNA: ENST00000611412.4

VPS45-212, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 5 BASIC

Gene VPS45, Length 2,064 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-212ENST00000611412 TNIKQ9UKE5 1360 aa19.28■□□□□ 0.68
VPS45-212ENST00000611412 CTTNBP2Q8WZ74 1663 aa19.26■□□□□ 0.67
VPS45-212ENST00000611412 NUP160Q12769 1436 aa19.25■□□□□ 0.67
VPS45-212ENST00000611412 KIAA0586Q9BVV6 1533 aa19.2■□□□□ 0.66
VPS45-212ENST00000611412 IQGAP2Q13576 1575 aa19.19■□□□□ 0.66
VPS45-212ENST00000611412 OSCARQ8IYS5 282 aa19.18■□□□□ 0.66
VPS45-212ENST00000611412 CEP162Q5TB80 1403 aa19.18■□□□□ 0.66
VPS45-212ENST00000611412 P3H3Q8IVL6 736 aa19.13■□□□□ 0.65
VPS45-212ENST00000611412 CLIP1P30622 1438 aa19.13■□□□□ 0.65
VPS45-212ENST00000611412 CLASP1Q7Z460 1538 aa19.13■□□□□ 0.65
VPS45-212ENST00000611412 JPH4Q96JJ6 628 aa19.12■□□□□ 0.65
VPS45-212ENST00000611412 ARHGAP35Q9NRY4 1499 aa19.08■□□□□ 0.64
VPS45-212ENST00000611412 UGGT2Q9NYU1 1516 aa19.07■□□□□ 0.64
VPS45-212ENST00000611412 TTBK1Q5TCY1 1321 aaPredicted RBP19.05■□□□□ 0.64
VPS45-212ENST00000611412 PRG4Q92954 1404 aaPredicted RBP19.04■□□□□ 0.64
VPS45-212ENST00000611412 SHROOM2Q13796 1616 aa19.03■□□□□ 0.64
VPS45-212ENST00000611412 DISP1Q96F81 1524 aa19.03■□□□□ 0.64
VPS45-212ENST00000611412 FHOD3Q2V2M9 1422 aa19.03■□□□□ 0.64
VPS45-212ENST00000611412 SAMD9Q5K651 1589 aa19.03■□□□□ 0.64
VPS45-212ENST00000611412 ERCC6L2Q5T890 1561 aa19.02■□□□□ 0.64
VPS45-212ENST00000611412 ARAP1Q96P48 1450 aa19.01■□□□□ 0.63
VPS45-212ENST00000611412 EFCAB5A4FU69 1503 aa19.01■□□□□ 0.63
VPS45-212ENST00000611412 KIAA0556O60303 1618 aa19■□□□□ 0.63
VPS45-212ENST00000611412 CARMIL2Q6F5E8 1435 aa18.98■□□□□ 0.63
VPS45-212ENST00000611412 VPS8Q8N3P4 1428 aa18.88■□□□□ 0.61
VPS45-212ENST00000611412 ATP1B4Q9UN42 357 aaPredicted RBP18.88■□□□□ 0.61
VPS45-212ENST00000611412 ARHGEF11O15085 1522 aa18.87■□□□□ 0.61
VPS45-212ENST00000611412 PTPRGP23470 1445 aa18.87■□□□□ 0.61
VPS45-212ENST00000611412 FMN1Q68DA7 1419 aa18.85■□□□□ 0.61
VPS45-212ENST00000611412 PCF11O94913 1555 aaKnown RBP18.83■□□□□ 0.6
VPS45-212ENST00000611412 PLB1Q6P1J6 1458 aa18.82■□□□□ 0.6
VPS45-212ENST00000611412 RIMBP3CA6NJZ7 1639 aa18.82■□□□□ 0.6
VPS45-212ENST00000611412 RIMBP3BA6NNM3 1639 aa18.82■□□□□ 0.6
VPS45-212ENST00000611412 RIMBP3Q9UFD9 1639 aa18.82■□□□□ 0.6
VPS45-212ENST00000611412 ARID3CA6NKF2 412 aa18.81■□□□□ 0.6
VPS45-212ENST00000611412 CASKIN1Q8WXD9 1431 aa18.77■□□□□ 0.6
VPS45-212ENST00000611412 RAPGEF6Q8TEU7 1601 aa18.76■□□□□ 0.59
VPS45-212ENST00000611412 ABCA8O94911 1581 aa18.75■□□□□ 0.59
VPS45-212ENST00000611412 PPARGC1BQ86YN6 1023 aaKnown RBP18.75■□□□□ 0.59
VPS45-212ENST00000611412 FYCO1Q9BQS8 1478 aa18.74■□□□□ 0.59
VPS45-212ENST00000611412 CYB5RLQ6IPT4 315 aa18.74■□□□□ 0.59
VPS45-212ENST00000611412 UACAQ9BZF9 1416 aa18.74■□□□□ 0.59
VPS45-212ENST00000611412 HECW1Q76N89 1606 aa18.72■□□□□ 0.59
VPS45-212ENST00000611412 NUP153P49790 1475 aaKnown RBP18.72■□□□□ 0.59
VPS45-212ENST00000611412 LRRIQ1Q96JM4 1722 aa18.72■□□□□ 0.59
VPS45-212ENST00000611412 APLP2Q06481 763 aa18.7■□□□□ 0.58
VPS45-212ENST00000611412 CDK13Q14004 1512 aaKnown RBP18.69■□□□□ 0.58
VPS45-212ENST00000611412 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.69■□□□□ 0.58
VPS45-212ENST00000611412 HNRNPUL2Q1KMD3 747 aaKnown RBP18.69■□□□□ 0.58
VPS45-212ENST00000611412 ABCC2Q92887 1545 aa18.68■□□□□ 0.58
VPS45-212ENST00000611412 DNAJC5Q9H3Z4 198 aa18.68■□□□□ 0.58
VPS45-212ENST00000611412 ADCY10Q96PN6 1610 aa18.67■□□□□ 0.58
VPS45-212ENST00000611412 EPRSP07814 1512 aaKnown RBP18.67■□□□□ 0.58
VPS45-212ENST00000611412 KANK4Q5T7N3 995 aaPredicted RBP18.64■□□□□ 0.57
VPS45-212ENST00000611412 TIAM1Q13009 1591 aa18.64■□□□□ 0.57
VPS45-212ENST00000611412 UHRF1BP1LA0JNW5 1464 aa18.64■□□□□ 0.57
VPS45-212ENST00000611412 ATP10BO94823 1461 aa18.63■□□□□ 0.57
VPS45-212ENST00000611412 CCDC18Q5T9S5 1454 aa18.62■□□□□ 0.57
VPS45-212ENST00000611412 CFAP43Q8NDM7 1665 aa18.62■□□□□ 0.57
VPS45-212ENST00000611412 ZCCHC11Q5TAX3 1644 aaKnown RBP18.59■□□□□ 0.57
VPS45-212ENST00000611412 MAGI3Q5TCQ9 1506 aa18.58■□□□□ 0.56
VPS45-212ENST00000611412 KDM5BQ9UGL1 1544 aa18.57■□□□□ 0.56
VPS45-212ENST00000611412 MAP3K1Q13233 1512 aa18.56■□□□□ 0.56
VPS45-212ENST00000611412 LRRC9Q6ZRR7 1453 aa18.56■□□□□ 0.56
VPS45-212ENST00000611412 NPM1P06748 294 aaKnown RBP eCLIP18.56■□□□□ 0.56
VPS45-212ENST00000611412 MTUS2Q5JR59 1369 aa18.55■□□□□ 0.56
VPS45-212ENST00000611412 PLEKHD1A6NEE1 506 aa18.53■□□□□ 0.56
VPS45-212ENST00000611412 CDK11AQ9UQ88 783 aaPredicted RBP18.52■□□□□ 0.56
VPS45-212ENST00000611412 KCNH8Q96L42 1107 aa18.49■□□□□ 0.55
VPS45-212ENST00000611412 EHBP1L1Q8N3D4 1523 aa18.48■□□□□ 0.55
VPS45-212ENST00000611412 TROQ12816 1431 aaPredicted RBP18.48■□□□□ 0.55
VPS45-212ENST00000611412 ASXL2Q76L83 1435 aa18.47■□□□□ 0.55
VPS45-212ENST00000611412 KIF14Q15058 1648 aa18.45■□□□□ 0.54
VPS45-212ENST00000611412 WDR7Q9Y4E6 1490 aa18.43■□□□□ 0.54
VPS45-212ENST00000611412 SUPT6HQ7KZ85 1726 aaKnown RBP18.42■□□□□ 0.54
VPS45-212ENST00000611412 NCOA2Q15596 1464 aa18.42■□□□□ 0.54
VPS45-212ENST00000611412 PHLDB1Q86UU1 1377 aa18.39■□□□□ 0.53
VPS45-212ENST00000611412 MAPKBP1O60336 1514 aa18.39■□□□□ 0.53
VPS45-212ENST00000611412 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.36■□□□□ 0.53
VPS45-212ENST00000611412 TTC37Q6PGP7 1564 aa18.35■□□□□ 0.53
VPS45-212ENST00000611412 ABCC10Q5T3U5 1492 aa18.34■□□□□ 0.53
VPS45-212ENST00000611412 CCNB3Q8WWL7 1395 aa18.34■□□□□ 0.53
VPS45-212ENST00000611412 GPATCH8Q9UKJ3 1502 aaKnown RBP18.3■□□□□ 0.52
VPS45-212ENST00000611412 MYOM3Q5VTT5 1437 aa18.3■□□□□ 0.52
VPS45-212ENST00000611412 FAM69CQ0P6D2 419 aa18.29■□□□□ 0.52
VPS45-212ENST00000611412 CDC42BPAQ5VT25 1732 aa18.28■□□□□ 0.52
VPS45-212ENST00000611412 DIP2BQ9P265 1576 aa18.28■□□□□ 0.52
VPS45-212ENST00000611412 ZNF777Q9ULD5 760 aaPredicted RBP18.27■□□□□ 0.52
VPS45-212ENST00000611412 ABCA9Q8IUA7 1624 aa18.27■□□□□ 0.51
VPS45-212ENST00000611412 FGD6Q6ZV73 1430 aa18.26■□□□□ 0.51
VPS45-212ENST00000611412 CFDP1Q9UEE9 299 aaPredicted RBP18.26■□□□□ 0.51
VPS45-212ENST00000611412 FAM50AQ14320 339 aaKnown RBP18.25■□□□□ 0.51
VPS45-212ENST00000611412 MYO5CQ9NQX4 1742 aa18.25■□□□□ 0.51
VPS45-212ENST00000611412 ZNF644Q9H582 1327 aaPredicted RBP18.25■□□□□ 0.51
VPS45-212ENST00000611412 ITSN2Q9NZM3 1697 aa18.24■□□□□ 0.51
VPS45-212ENST00000611412 CDC42BPBQ9Y5S2 1711 aa18.24■□□□□ 0.51
VPS45-212ENST00000611412 TRIM26Q12899 539 aaPredicted RBP18.24■□□□□ 0.51
VPS45-212ENST00000611412 PREX2Q70Z35 1606 aa18.23■□□□□ 0.51
VPS45-212ENST00000611412 CD109Q6YHK3 1445 aa18.23■□□□□ 0.51
VPS45-212ENST00000611412 ARHGAP5Q13017 1502 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms