RNA–Protein interactions for RNA: ENST00000611284.4

NCAM1-219, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 5

Gene NCAM1, Length 3,309 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-219ENST00000611284 FHOD3Q2V2M9 1422 aa12.42□□□□□ -0.42
NCAM1-219ENST00000611284 GTF3C3Q9Y5Q9 886 aa12.4□□□□□ -0.42
NCAM1-219ENST00000611284 ACIN1Q9UKV3 1341 aaKnown RBP12.4□□□□□ -0.42
NCAM1-219ENST00000611284 ERICH3Q5RHP9 1530 aa12.39□□□□□ -0.43
NCAM1-219ENST00000611284 CCNB3Q8WWL7 1395 aa12.39□□□□□ -0.43
NCAM1-219ENST00000611284 HIRIP3Q9BW71 556 aaPredicted RBP12.37□□□□□ -0.43
NCAM1-219ENST00000611284 FBLN2P98095 1184 aa12.36□□□□□ -0.43
NCAM1-219ENST00000611284 SIN3AQ96ST3 1273 aa12.35□□□□□ -0.43
NCAM1-219ENST00000611284 DHX57Q6P158 1386 aaKnown RBP12.34□□□□□ -0.43
NCAM1-219ENST00000611284 POLA1P09884 1462 aaPredicted RBP12.34□□□□□ -0.43
NCAM1-219ENST00000611284 CHIC2Q9UKJ5 165 aa12.33□□□□□ -0.44
NCAM1-219ENST00000611284 PLEKHG5O94827 1062 aa12.32□□□□□ -0.44
NCAM1-219ENST00000611284 TOPBP1Q92547 1522 aa12.32□□□□□ -0.44
NCAM1-219ENST00000611284 PHLDB1Q86UU1 1377 aa12.3□□□□□ -0.44
NCAM1-219ENST00000611284 MTUS2Q5JR59 1369 aa12.3□□□□□ -0.44
NCAM1-219ENST00000611284 RAB3GAP2Q9H2M9 1393 aa12.3□□□□□ -0.44
NCAM1-219ENST00000611284 TRIM52Q96A61 297 aa12.25□□□□□ -0.45
NCAM1-219ENST00000611284 RRP7BPQ9NSQ0 103 aa12.25□□□□□ -0.45
NCAM1-219ENST00000611284 URB2Q14146 1524 aaKnown RBP12.25□□□□□ -0.45
NCAM1-219ENST00000611284 FHAD1B1AJZ9 1412 aa12.25□□□□□ -0.45
NCAM1-219ENST00000611284 PDS5BQ9NTI5 1447 aa12.24□□□□□ -0.45
NCAM1-219ENST00000611284 DNMBPQ6XZF7 1577 aa12.24□□□□□ -0.45
NCAM1-219ENST00000611284 AQRO60306 1485 aaKnown RBP eCLIP12.22□□□□□ -0.45
NCAM1-219ENST00000611284 LRRC9Q6ZRR7 1453 aa12.22□□□□□ -0.45
NCAM1-219ENST00000611284 RRBP1Q9P2E9 1410 aaKnown RBP12.22□□□□□ -0.45
NCAM1-219ENST00000611284 GAPVD1Q14C86 1478 aa12.21□□□□□ -0.45
NCAM1-219ENST00000611284 DDX10Q13206 875 aaKnown RBP12.21□□□□□ -0.45
NCAM1-219ENST00000611284 PCF11O94913 1555 aaKnown RBP12.21□□□□□ -0.46
NCAM1-219ENST00000611284 CNGB1Q14028 1251 aaPredicted RBP12.21□□□□□ -0.46
NCAM1-219ENST00000611284 TIAM1Q13009 1591 aa12.2□□□□□ -0.46
NCAM1-219ENST00000611284 ABCA10Q8WWZ4 1543 aa12.19□□□□□ -0.46
NCAM1-219ENST00000611284 SETD5Q9C0A6 1442 aa12.19□□□□□ -0.46
NCAM1-219ENST00000611284 ZNF777Q9ULD5 760 aaPredicted RBP12.18□□□□□ -0.46
NCAM1-219ENST00000611284 PRDM2Q13029 1718 aa12.16□□□□□ -0.46
NCAM1-219ENST00000611284 KCNH8Q96L42 1107 aa12.16□□□□□ -0.46
NCAM1-219ENST00000611284 FOXD1Q16676 465 aa12.14□□□□□ -0.47
NCAM1-219ENST00000611284 CHMP7Q8WUX9 453 aaPredicted RBP12.13□□□□□ -0.47
NCAM1-219ENST00000611284 FMN1Q68DA7 1419 aa12.13□□□□□ -0.47
NCAM1-219ENST00000611284 ERCC6Q03468 1493 aa12.13□□□□□ -0.47
NCAM1-219ENST00000611284 CLSPNQ9HAW4 1339 aa12.12□□□□□ -0.47
NCAM1-219ENST00000611284 TONSLQ96HA7 1378 aa12.11□□□□□ -0.47
NCAM1-219ENST00000611284 LAMC3Q9Y6N6 1575 aa12.1□□□□□ -0.47
NCAM1-219ENST00000611284 POLR3GLQ9BT43 218 aa12.1□□□□□ -0.47
NCAM1-219ENST00000611284 CASKIN1Q8WXD9 1431 aa12.1□□□□□ -0.47
NCAM1-219ENST00000611284 EIF5BO60841 1220 aaKnown RBP12.1□□□□□ -0.47
NCAM1-219ENST00000611284 KIF21AQ7Z4S6 1674 aa12.09□□□□□ -0.47
NCAM1-219ENST00000611284 BCANQ96GW7 911 aa12.09□□□□□ -0.47
NCAM1-219ENST00000611284 ZNF326Q5BKZ1 582 aaKnown RBP12.08□□□□□ -0.48
NCAM1-219ENST00000611284 ZNF608Q9ULD9 1512 aaPredicted RBP12.08□□□□□ -0.48
NCAM1-219ENST00000611284 FGD6Q6ZV73 1430 aa12.07□□□□□ -0.48
NCAM1-219ENST00000611284 FYCO1Q9BQS8 1478 aa12.07□□□□□ -0.48
NCAM1-219ENST00000611284 ZNF644Q9H582 1327 aaPredicted RBP12.05□□□□□ -0.48
NCAM1-219ENST00000611284 NCOA2Q15596 1464 aa12.05□□□□□ -0.48
NCAM1-219ENST00000611284 AEBP2Q6ZN18 517 aaPredicted RBP12.04□□□□□ -0.48
NCAM1-219ENST00000611284 CUL7Q14999 1698 aa12.03□□□□□ -0.48
NCAM1-219ENST00000611284 CDK13Q14004 1512 aaKnown RBP12.03□□□□□ -0.48
NCAM1-219ENST00000611284 EFCAB5A4FU69 1503 aa12.03□□□□□ -0.48
NCAM1-219ENST00000611284 MAPKBP1O60336 1514 aa12.03□□□□□ -0.48
NCAM1-219ENST00000611284 CCDC18Q5T9S5 1454 aa12.02□□□□□ -0.48
NCAM1-219ENST00000611284 PTPRKQ15262 1439 aa12.02□□□□□ -0.48
NCAM1-219ENST00000611284 DAXXQ9UER7 740 aaPredicted RBP12.02□□□□□ -0.49
NCAM1-219ENST00000611284 WDR97A6NE52 1622 aa12.01□□□□□ -0.49
NCAM1-219ENST00000611284 MRC2Q9UBG0 1479 aa12.01□□□□□ -0.49
NCAM1-219ENST00000611284 PPP1R15AO75807 674 aaPredicted RBP12□□□□□ -0.49
NCAM1-219ENST00000611284 CTTNBP2Q8WZ74 1663 aa12□□□□□ -0.49
NCAM1-219ENST00000611284 MYOM3Q5VTT5 1437 aa11.99□□□□□ -0.49
NCAM1-219ENST00000611284 ANP32CO43423 234 aa11.99□□□□□ -0.49
NCAM1-219ENST00000611284 SNAPC4Q5SXM2 1469 aa11.99□□□□□ -0.49
NCAM1-219ENST00000611284 CDK11AQ9UQ88 783 aaPredicted RBP11.98□□□□□ -0.49
NCAM1-219ENST00000611284 GRIN2BQ13224 1484 aa11.97□□□□□ -0.49
NCAM1-219ENST00000611284 SENP3-EIF4A1A0A087X0R7 540 aa11.97□□□□□ -0.49
NCAM1-219ENST00000611284 CFDP1Q9UEE9 299 aaPredicted RBP11.97□□□□□ -0.49
NCAM1-219ENST00000611284 ABCA5Q8WWZ7 1642 aa11.97□□□□□ -0.49
NCAM1-219ENST00000611284 MAP3K1Q13233 1512 aa11.97□□□□□ -0.49
NCAM1-219ENST00000611284 CFAP43Q8NDM7 1665 aa11.97□□□□□ -0.49
NCAM1-219ENST00000611284 SLC4A1APQ9BWU0 796 aaKnown RBP11.97□□□□□ -0.49
NCAM1-219ENST00000611284 ANO8Q9HCE9 1232 aaPredicted RBP11.97□□□□□ -0.49
NCAM1-219ENST00000611284 MPHOSPH9Q99550 1183 aa11.94□□□□□ -0.5
NCAM1-219ENST00000611284 IQGAP2Q13576 1575 aa11.93□□□□□ -0.5
NCAM1-219ENST00000611284 JPH4Q96JJ6 628 aa11.93□□□□□ -0.5
NCAM1-219ENST00000611284 MAGI3Q5TCQ9 1506 aa11.92□□□□□ -0.5
NCAM1-219ENST00000611284 EPRSP07814 1512 aaKnown RBP11.92□□□□□ -0.5
NCAM1-219ENST00000611284 NAIPQ13075 1403 aa11.92□□□□□ -0.5
NCAM1-219ENST00000611284 TARBP1Q13395 1621 aaKnown RBP11.91□□□□□ -0.5
NCAM1-219ENST00000611284 HSPA5P11021 654 aaKnown RBP11.9□□□□□ -0.5
NCAM1-219ENST00000611284 L3MBTL2Q969R5 705 aa11.9□□□□□ -0.5
NCAM1-219ENST00000611284 PRG4Q92954 1404 aaPredicted RBP11.9□□□□□ -0.5
NCAM1-219ENST00000611284 THOC2Q8NI27 1593 aaKnown RBP11.9□□□□□ -0.5
NCAM1-219ENST00000611284 KDM2AQ9Y2K7 1162 aa11.89□□□□□ -0.51
NCAM1-219ENST00000611284 HFM1A2PYH4 1435 aa11.89□□□□□ -0.51
NCAM1-219ENST00000611284 EHBP1L1Q8N3D4 1523 aa11.89□□□□□ -0.51
NCAM1-219ENST00000611284 IFT140Q96RY7 1462 aa11.89□□□□□ -0.51
NCAM1-219ENST00000611284 UACAQ9BZF9 1416 aa11.89□□□□□ -0.51
NCAM1-219ENST00000611284 PLEKHD1A6NEE1 506 aa11.89□□□□□ -0.51
NCAM1-219ENST00000611284 SUPT6HQ7KZ85 1726 aaKnown RBP11.88□□□□□ -0.51
NCAM1-219ENST00000611284 FKBP8Q14318 412 aa11.88□□□□□ -0.51
NCAM1-219ENST00000611284 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.88□□□□□ -0.51
NCAM1-219ENST00000611284 PLB1Q6P1J6 1458 aa11.88□□□□□ -0.51
NCAM1-219ENST00000611284 PTPN23Q9H3S7 1636 aa11.88□□□□□ -0.51
NCAM1-219ENST00000611284 SAMD9Q5K651 1589 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms