RNA–Protein interactions for RNA: ENST00000611138.1

FAM228B-206, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 2

Gene FAM228B, Length 362 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-206ENST00000611138 GRIN2AQ12879 1464 aa14.36□□□□□ -0.11
FAM228B-206ENST00000611138 CHMP7Q8WUX9 453 aaPredicted RBP14.34□□□□□ -0.11
FAM228B-206ENST00000611138 CARMIL1Q5VZK9 1371 aa14.33□□□□□ -0.12
FAM228B-206ENST00000611138 CEP170Q5SW79 1584 aa14.31□□□□□ -0.12
FAM228B-206ENST00000611138 RAPGEF2Q9Y4G8 1499 aa14.3□□□□□ -0.12
FAM228B-206ENST00000611138 KIF21BO75037 1637 aa14.3□□□□□ -0.12
FAM228B-206ENST00000611138 CTTNBP2Q8WZ74 1663 aa14.3□□□□□ -0.12
FAM228B-206ENST00000611138 CSRNP3Q8WYN3 585 aa14.29□□□□□ -0.12
FAM228B-206ENST00000611138 PRXQ9BXM0 1461 aa14.29□□□□□ -0.12
FAM228B-206ENST00000611138 CLASP1Q7Z460 1538 aa14.27□□□□□ -0.12
FAM228B-206ENST00000611138 OSCARQ8IYS5 282 aa14.25□□□□□ -0.13
FAM228B-206ENST00000611138 NUP160Q12769 1436 aa14.24□□□□□ -0.13
FAM228B-206ENST00000611138 EHMT2Q96KQ7 1210 aa14.21□□□□□ -0.13
FAM228B-206ENST00000611138 GOLGA3Q08378 1498 aa14.19□□□□□ -0.14
FAM228B-206ENST00000611138 IQGAP2Q13576 1575 aa14.19□□□□□ -0.14
FAM228B-206ENST00000611138 RNF39Q9H2S5 420 aa14.19□□□□□ -0.14
FAM228B-206ENST00000611138 SHROOM2Q13796 1616 aa14.19□□□□□ -0.14
FAM228B-206ENST00000611138 KIAA0586Q9BVV6 1533 aa14.16□□□□□ -0.14
FAM228B-206ENST00000611138 POTEHQ6S545 545 aa14.16□□□□□ -0.14
FAM228B-206ENST00000611138 RIMBP3CA6NJZ7 1639 aa14.14□□□□□ -0.15
FAM228B-206ENST00000611138 RIMBP3BA6NNM3 1639 aa14.14□□□□□ -0.15
FAM228B-206ENST00000611138 RIMBP3Q9UFD9 1639 aa14.14□□□□□ -0.15
FAM228B-206ENST00000611138 ERCC6L2Q5T890 1561 aa14.12□□□□□ -0.15
FAM228B-206ENST00000611138 ARHGEF11O15085 1522 aa14.11□□□□□ -0.15
FAM228B-206ENST00000611138 DCAF8L1A6NGE4 600 aa14.11□□□□□ -0.15
FAM228B-206ENST00000611138 UBTFP17480 764 aaKnown RBP14.09□□□□□ -0.15
FAM228B-206ENST00000611138 DNAJC5Q9H3Z4 198 aa14.09□□□□□ -0.15
FAM228B-206ENST00000611138 UGGT2Q9NYU1 1516 aa14.08□□□□□ -0.16
FAM228B-206ENST00000611138 PRG4Q92954 1404 aaPredicted RBP14.07□□□□□ -0.16
FAM228B-206ENST00000611138 KIAA0556O60303 1618 aa14.07□□□□□ -0.16
FAM228B-206ENST00000611138 JPH4Q96JJ6 628 aa14.06□□□□□ -0.16
FAM228B-206ENST00000611138 SCAF1Q9H7N4 1312 aaKnown RBP14.06□□□□□ -0.16
FAM228B-206ENST00000611138 SAMD9Q5K651 1589 aa14.05□□□□□ -0.16
FAM228B-206ENST00000611138 RANGAP1P46060 587 aaPredicted RBP14.04□□□□□ -0.16
FAM228B-206ENST00000611138 DISP1Q96F81 1524 aa14.04□□□□□ -0.16
FAM228B-206ENST00000611138 LOC105371045A0A1W2PR82 267 aa14.02□□□□□ -0.17
FAM228B-206ENST00000611138 ARAP1Q96P48 1450 aa14.01□□□□□ -0.17
FAM228B-206ENST00000611138 CARMIL2Q6F5E8 1435 aa14□□□□□ -0.17
FAM228B-206ENST00000611138 EFCAB5A4FU69 1503 aa14□□□□□ -0.17
FAM228B-206ENST00000611138 TNIKQ9UKE5 1360 aa13.99□□□□□ -0.17
FAM228B-206ENST00000611138 TTBK1Q5TCY1 1321 aaPredicted RBP13.96□□□□□ -0.17
FAM228B-206ENST00000611138 ARHGAP35Q9NRY4 1499 aa13.95□□□□□ -0.18
FAM228B-206ENST00000611138 P3H3Q8IVL6 736 aa13.95□□□□□ -0.18
FAM228B-206ENST00000611138 C1QBPQ07021 282 aaKnown RBP13.94□□□□□ -0.18
FAM228B-206ENST00000611138 FHOD3Q2V2M9 1422 aa13.94□□□□□ -0.18
FAM228B-206ENST00000611138 CEP162Q5TB80 1403 aa13.93□□□□□ -0.18
FAM228B-206ENST00000611138 CLIP1P30622 1438 aa13.92□□□□□ -0.18
FAM228B-206ENST00000611138 CYB5RLQ6IPT4 315 aa13.91□□□□□ -0.18
FAM228B-206ENST00000611138 PTPRGP23470 1445 aa13.9□□□□□ -0.18
FAM228B-206ENST00000611138 ADCY10Q96PN6 1610 aa13.9□□□□□ -0.18
FAM228B-206ENST00000611138 RAPGEF6Q8TEU7 1601 aa13.87□□□□□ -0.19
FAM228B-206ENST00000611138 ABCA8O94911 1581 aa13.87□□□□□ -0.19
FAM228B-206ENST00000611138 PLB1Q6P1J6 1458 aa13.86□□□□□ -0.19
FAM228B-206ENST00000611138 ABCC2Q92887 1545 aa13.85□□□□□ -0.19
FAM228B-206ENST00000611138 PCF11O94913 1555 aaKnown RBP13.84□□□□□ -0.19
FAM228B-206ENST00000611138 UACAQ9BZF9 1416 aa13.83□□□□□ -0.2
FAM228B-206ENST00000611138 LRRIQ1Q96JM4 1722 aa13.83□□□□□ -0.2
FAM228B-206ENST00000611138 ZCCHC11Q5TAX3 1644 aaKnown RBP13.82□□□□□ -0.2
FAM228B-206ENST00000611138 HECW1Q76N89 1606 aa13.82□□□□□ -0.2
FAM228B-206ENST00000611138 FMN1Q68DA7 1419 aa13.81□□□□□ -0.2
FAM228B-206ENST00000611138 UHRF1BP1LA0JNW5 1464 aa13.8□□□□□ -0.2
FAM228B-206ENST00000611138 NUP153P49790 1475 aaKnown RBP13.77□□□□□ -0.21
FAM228B-206ENST00000611138 ARID3CA6NKF2 412 aa13.76□□□□□ -0.21
FAM228B-206ENST00000611138 KDM5BQ9UGL1 1544 aa13.75□□□□□ -0.21
FAM228B-206ENST00000611138 FYCO1Q9BQS8 1478 aa13.75□□□□□ -0.21
FAM228B-206ENST00000611138 CDK13Q14004 1512 aaKnown RBP13.74□□□□□ -0.21
FAM228B-206ENST00000611138 CASKIN1Q8WXD9 1431 aa13.74□□□□□ -0.21
FAM228B-206ENST00000611138 ATP1B4Q9UN42 357 aaPredicted RBP13.74□□□□□ -0.21
FAM228B-206ENST00000611138 VPS8Q8N3P4 1428 aa13.73□□□□□ -0.21
FAM228B-206ENST00000611138 NPM1P06748 294 aaKnown RBP eCLIP13.72□□□□□ -0.21
FAM228B-206ENST00000611138 MAPKBP1O60336 1514 aa13.72□□□□□ -0.21
FAM228B-206ENST00000611138 CFAP43Q8NDM7 1665 aa13.72□□□□□ -0.21
FAM228B-206ENST00000611138 EPRSP07814 1512 aaKnown RBP13.71□□□□□ -0.21
FAM228B-206ENST00000611138 ATP10BO94823 1461 aa13.71□□□□□ -0.21
FAM228B-206ENST00000611138 KIF13AQ9H1H9 1805 aa13.69□□□□□ -0.22
FAM228B-206ENST00000611138 CCDC18Q5T9S5 1454 aa13.68□□□□□ -0.22
FAM228B-206ENST00000611138 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.68□□□□□ -0.22
FAM228B-206ENST00000611138 HNRNPUL2Q1KMD3 747 aaKnown RBP13.68□□□□□ -0.22
FAM228B-206ENST00000611138 ASXL2Q76L83 1435 aa13.67□□□□□ -0.22
FAM228B-206ENST00000611138 DIP2BQ9P265 1576 aa13.66□□□□□ -0.22
FAM228B-206ENST00000611138 WDR7Q9Y4E6 1490 aa13.65□□□□□ -0.22
FAM228B-206ENST00000611138 TIAM1Q13009 1591 aa13.65□□□□□ -0.22
FAM228B-206ENST00000611138 MAGI3Q5TCQ9 1506 aa13.63□□□□□ -0.23
FAM228B-206ENST00000611138 TSPOAP1O95153 1857 aa13.62□□□□□ -0.23
FAM228B-206ENST00000611138 KIF14Q15058 1648 aa13.61□□□□□ -0.23
FAM228B-206ENST00000611138 ABCC10Q5T3U5 1492 aa13.6□□□□□ -0.23
FAM228B-206ENST00000611138 EHBP1L1Q8N3D4 1523 aa13.59□□□□□ -0.23
FAM228B-206ENST00000611138 TTC37Q6PGP7 1564 aa13.58□□□□□ -0.23
FAM228B-206ENST00000611138 MAP3K4Q9Y6R4 1608 aa13.58□□□□□ -0.24
FAM228B-206ENST00000611138 TRHP20396 242 aaPredicted RBP13.58□□□□□ -0.24
FAM228B-206ENST00000611138 GLI2P10070 1586 aa13.58□□□□□ -0.24
FAM228B-206ENST00000611138 ABCA9Q8IUA7 1624 aa13.57□□□□□ -0.24
FAM228B-206ENST00000611138 TROQ12816 1431 aaPredicted RBP13.57□□□□□ -0.24
FAM228B-206ENST00000611138 MYO5CQ9NQX4 1742 aa13.57□□□□□ -0.24
FAM228B-206ENST00000611138 PLEKHD1A6NEE1 506 aa13.57□□□□□ -0.24
FAM228B-206ENST00000611138 KCNH8Q96L42 1107 aa13.57□□□□□ -0.24
FAM228B-206ENST00000611138 MAP3K1Q13233 1512 aa13.57□□□□□ -0.24
FAM228B-206ENST00000611138 SUPT6HQ7KZ85 1726 aaKnown RBP13.56□□□□□ -0.24
FAM228B-206ENST00000611138 CDK11AQ9UQ88 783 aaPredicted RBP13.56□□□□□ -0.24
FAM228B-206ENST00000611138 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms