RNA–Protein interactions for RNA: ENST00000608669.1

LINC00963-212, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 531 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-212ENST00000608669 RAPGEF2Q9Y4G8 1499 aa20.41■□□□□ 0.86
LINC00963-212ENST00000608669 PRXQ9BXM0 1461 aa20.37■□□□□ 0.85
LINC00963-212ENST00000608669 CSRNP3Q8WYN3 585 aa20.36■□□□□ 0.85
LINC00963-212ENST00000608669 SHROOM2Q13796 1616 aa20.34■□□□□ 0.85
LINC00963-212ENST00000608669 CTTNBP2Q8WZ74 1663 aa20.33■□□□□ 0.85
LINC00963-212ENST00000608669 EEA1Q15075 1411 aa20.33■□□□□ 0.84
LINC00963-212ENST00000608669 ARAP1Q96P48 1450 aa20.3■□□□□ 0.84
LINC00963-212ENST00000608669 IQGAP2Q13576 1575 aa20.29■□□□□ 0.84
LINC00963-212ENST00000608669 KIAA0586Q9BVV6 1533 aa20.28■□□□□ 0.84
LINC00963-212ENST00000608669 KIF21BO75037 1637 aa20.26■□□□□ 0.83
LINC00963-212ENST00000608669 PRG4Q92954 1404 aaPredicted RBP20.26■□□□□ 0.83
LINC00963-212ENST00000608669 JPH4Q96JJ6 628 aa20.23■□□□□ 0.83
LINC00963-212ENST00000608669 TTBK1Q5TCY1 1321 aaPredicted RBP20.23■□□□□ 0.83
LINC00963-212ENST00000608669 RANGAP1P46060 587 aaPredicted RBP20.22■□□□□ 0.83
LINC00963-212ENST00000608669 CYB5RLQ6IPT4 315 aa20.22■□□□□ 0.83
LINC00963-212ENST00000608669 GOLGA3Q08378 1498 aa20.14■□□□□ 0.81
LINC00963-212ENST00000608669 DISP1Q96F81 1524 aa20.13■□□□□ 0.81
LINC00963-212ENST00000608669 KIAA0556O60303 1618 aa20.13■□□□□ 0.81
LINC00963-212ENST00000608669 UGGT2Q9NYU1 1516 aa20.12■□□□□ 0.81
LINC00963-212ENST00000608669 UBTFP17480 764 aaKnown RBP20.1■□□□□ 0.81
LINC00963-212ENST00000608669 P3H3Q8IVL6 736 aa20.08■□□□□ 0.81
LINC00963-212ENST00000608669 CARMIL2Q6F5E8 1435 aa20.04■□□□□ 0.8
LINC00963-212ENST00000608669 SAMD9Q5K651 1589 aa20.01■□□□□ 0.79
LINC00963-212ENST00000608669 ADCY10Q96PN6 1610 aa20.01■□□□□ 0.79
LINC00963-212ENST00000608669 TNIKQ9UKE5 1360 aa19.99■□□□□ 0.79
LINC00963-212ENST00000608669 LOC105371045A0A1W2PR82 267 aa19.98■□□□□ 0.79
LINC00963-212ENST00000608669 PTPRGP23470 1445 aa19.98■□□□□ 0.79
LINC00963-212ENST00000608669 FHOD3Q2V2M9 1422 aa19.98■□□□□ 0.79
LINC00963-212ENST00000608669 PLB1Q6P1J6 1458 aa19.93■□□□□ 0.78
LINC00963-212ENST00000608669 ARID3CA6NKF2 412 aa19.91■□□□□ 0.78
LINC00963-212ENST00000608669 ARHGAP35Q9NRY4 1499 aa19.9■□□□□ 0.78
LINC00963-212ENST00000608669 EFCAB5A4FU69 1503 aa19.88■□□□□ 0.77
LINC00963-212ENST00000608669 ABCC2Q92887 1545 aa19.86■□□□□ 0.77
LINC00963-212ENST00000608669 ABCA8O94911 1581 aa19.86■□□□□ 0.77
LINC00963-212ENST00000608669 UACAQ9BZF9 1416 aa19.85■□□□□ 0.77
LINC00963-212ENST00000608669 ZCCHC11Q5TAX3 1644 aaKnown RBP19.83■□□□□ 0.76
LINC00963-212ENST00000608669 RAPGEF6Q8TEU7 1601 aa19.82■□□□□ 0.76
LINC00963-212ENST00000608669 CLIP1P30622 1438 aa19.8■□□□□ 0.76
LINC00963-212ENST00000608669 CEP162Q5TB80 1403 aa19.78■□□□□ 0.76
LINC00963-212ENST00000608669 TRHP20396 242 aaPredicted RBP19.78■□□□□ 0.76
LINC00963-212ENST00000608669 UHRF1BP1LA0JNW5 1464 aa19.78■□□□□ 0.76
LINC00963-212ENST00000608669 PCF11O94913 1555 aaKnown RBP19.75■□□□□ 0.75
LINC00963-212ENST00000608669 NUP153P49790 1475 aaKnown RBP19.73■□□□□ 0.75
LINC00963-212ENST00000608669 NPM1P06748 294 aaKnown RBP eCLIP19.73■□□□□ 0.75
LINC00963-212ENST00000608669 ATP1B4Q9UN42 357 aaPredicted RBP19.73■□□□□ 0.75
LINC00963-212ENST00000608669 KIF13AQ9H1H9 1805 aa19.73■□□□□ 0.75
LINC00963-212ENST00000608669 LRRIQ1Q96JM4 1722 aa19.73■□□□□ 0.75
LINC00963-212ENST00000608669 KDM5BQ9UGL1 1544 aa19.72■□□□□ 0.75
LINC00963-212ENST00000608669 MAPKBP1O60336 1514 aa19.71■□□□□ 0.75
LINC00963-212ENST00000608669 CDK13Q14004 1512 aaKnown RBP19.71■□□□□ 0.75
LINC00963-212ENST00000608669 ASXL2Q76L83 1435 aa19.7■□□□□ 0.74
LINC00963-212ENST00000608669 ATP10BO94823 1461 aa19.68■□□□□ 0.74
LINC00963-212ENST00000608669 DIP2BQ9P265 1576 aa19.68■□□□□ 0.74
LINC00963-212ENST00000608669 HECW1Q76N89 1606 aa19.66■□□□□ 0.74
LINC00963-212ENST00000608669 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.66■□□□□ 0.74
LINC00963-212ENST00000608669 HNRNPUL2Q1KMD3 747 aaKnown RBP19.66■□□□□ 0.74
LINC00963-212ENST00000608669 FMN1Q68DA7 1419 aa19.66■□□□□ 0.74
LINC00963-212ENST00000608669 TSPOAP1O95153 1857 aa19.64■□□□□ 0.73
LINC00963-212ENST00000608669 ABCC10Q5T3U5 1492 aa19.61■□□□□ 0.73
LINC00963-212ENST00000608669 WDR7Q9Y4E6 1490 aa19.6■□□□□ 0.73
LINC00963-212ENST00000608669 FAM69CQ0P6D2 419 aa19.6■□□□□ 0.73
LINC00963-212ENST00000608669 KCNH8Q96L42 1107 aa19.59■□□□□ 0.73
LINC00963-212ENST00000608669 EPRSP07814 1512 aaKnown RBP19.59■□□□□ 0.73
LINC00963-212ENST00000608669 CASKIN1Q8WXD9 1431 aa19.57■□□□□ 0.72
LINC00963-212ENST00000608669 FYCO1Q9BQS8 1478 aa19.54■□□□□ 0.72
LINC00963-212ENST00000608669 PPRC1Q5VV67 1664 aaKnown RBP19.52■□□□□ 0.71
LINC00963-212ENST00000608669 MAGI3Q5TCQ9 1506 aa19.51■□□□□ 0.71
LINC00963-212ENST00000608669 KIF14Q15058 1648 aa19.51■□□□□ 0.71
LINC00963-212ENST00000608669 MAP3K4Q9Y6R4 1608 aa19.51■□□□□ 0.71
LINC00963-212ENST00000608669 VPS8Q8N3P4 1428 aa19.48■□□□□ 0.71
LINC00963-212ENST00000608669 GLI2P10070 1586 aa19.48■□□□□ 0.71
LINC00963-212ENST00000608669 TTC37Q6PGP7 1564 aa19.48■□□□□ 0.71
LINC00963-212ENST00000608669 CCDC18Q5T9S5 1454 aa19.45■□□□□ 0.7
LINC00963-212ENST00000608669 CFAP43Q8NDM7 1665 aa19.44■□□□□ 0.7
LINC00963-212ENST00000608669 PLEKHD1A6NEE1 506 aa19.43■□□□□ 0.7
LINC00963-212ENST00000608669 ABCA9Q8IUA7 1624 aa19.43■□□□□ 0.7
LINC00963-212ENST00000608669 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.42■□□□□ 0.7
LINC00963-212ENST00000608669 TROQ12816 1431 aaPredicted RBP19.39■□□□□ 0.69
LINC00963-212ENST00000608669 CD109Q6YHK3 1445 aa19.39■□□□□ 0.69
LINC00963-212ENST00000608669 TIAM1Q13009 1591 aa19.38■□□□□ 0.69
LINC00963-212ENST00000608669 MYO5CQ9NQX4 1742 aa19.34■□□□□ 0.69
LINC00963-212ENST00000608669 KDM6BO15054 1643 aa19.33■□□□□ 0.69
LINC00963-212ENST00000608669 CDK11AQ9UQ88 783 aaPredicted RBP19.32■□□□□ 0.68
LINC00963-212ENST00000608669 MTUS2Q5JR59 1369 aa19.32■□□□□ 0.68
LINC00963-212ENST00000608669 EHBP1L1Q8N3D4 1523 aa19.3■□□□□ 0.68
LINC00963-212ENST00000608669 COL17A1Q9UMD9 1497 aaPredicted RBP19.29■□□□□ 0.68
LINC00963-212ENST00000608669 CDC42BPAQ5VT25 1732 aa19.29■□□□□ 0.68
LINC00963-212ENST00000608669 KANK4Q5T7N3 995 aaPredicted RBP19.29■□□□□ 0.68
LINC00963-212ENST00000608669 TEX14Q8IWB6 1497 aa19.28■□□□□ 0.68
LINC00963-212ENST00000608669 CDC42BPBQ9Y5S2 1711 aa19.28■□□□□ 0.68
LINC00963-212ENST00000608669 PREX2Q70Z35 1606 aa19.26■□□□□ 0.67
LINC00963-212ENST00000608669 ARHGAP5Q13017 1502 aa19.25■□□□□ 0.67
LINC00963-212ENST00000608669 LRRC9Q6ZRR7 1453 aa19.25■□□□□ 0.67
LINC00963-212ENST00000608669 PPARGC1BQ86YN6 1023 aaKnown RBP19.25■□□□□ 0.67
LINC00963-212ENST00000608669 FANCAO15360 1455 aa19.24■□□□□ 0.67
LINC00963-212ENST00000608669 SUPT6HQ7KZ85 1726 aaKnown RBP19.23■□□□□ 0.67
LINC00963-212ENST00000608669 NCOA2Q15596 1464 aa19.22■□□□□ 0.67
LINC00963-212ENST00000608669 PLCH2O75038 1416 aa19.21■□□□□ 0.67
LINC00963-212ENST00000608669 FRMPD1Q5SYB0 1578 aa19.19■□□□□ 0.66
LINC00963-212ENST00000608669 CFAP74Q9C0B2 1584 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms