RNA–Protein interactions for RNA: ENST00000608107.1

ITGB5-211, Transcript of integrin subunit beta 5, humanhuman

TSL 3

Gene ITGB5, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-211ENST00000608107 CTTNBP2Q8WZ74 1663 aa16.78■□□□□ 0.28
ITGB5-211ENST00000608107 UBTFP17480 764 aaKnown RBP16.77■□□□□ 0.28
ITGB5-211ENST00000608107 CLASP1Q7Z460 1538 aa16.75■□□□□ 0.27
ITGB5-211ENST00000608107 KIAA0586Q9BVV6 1533 aa16.73■□□□□ 0.27
ITGB5-211ENST00000608107 IQGAP2Q13576 1575 aa16.71■□□□□ 0.27
ITGB5-211ENST00000608107 RANGAP1P46060 587 aaPredicted RBP16.68■□□□□ 0.26
ITGB5-211ENST00000608107 TNIKQ9UKE5 1360 aa16.67■□□□□ 0.26
ITGB5-211ENST00000608107 JPH4Q96JJ6 628 aa16.67■□□□□ 0.26
ITGB5-211ENST00000608107 SHROOM2Q13796 1616 aa16.66■□□□□ 0.26
ITGB5-211ENST00000608107 ERCC6L2Q5T890 1561 aa16.63■□□□□ 0.25
ITGB5-211ENST00000608107 UGGT2Q9NYU1 1516 aa16.62■□□□□ 0.25
ITGB5-211ENST00000608107 PRG4Q92954 1404 aaPredicted RBP16.61■□□□□ 0.25
ITGB5-211ENST00000608107 DISP1Q96F81 1524 aa16.59■□□□□ 0.25
ITGB5-211ENST00000608107 P3H3Q8IVL6 736 aa16.58■□□□□ 0.24
ITGB5-211ENST00000608107 CEP162Q5TB80 1403 aa16.55■□□□□ 0.24
ITGB5-211ENST00000608107 KIAA0556O60303 1618 aa16.55■□□□□ 0.24
ITGB5-211ENST00000608107 SAMD9Q5K651 1589 aa16.55■□□□□ 0.24
ITGB5-211ENST00000608107 ARHGEF11O15085 1522 aa16.55■□□□□ 0.24
ITGB5-211ENST00000608107 RIMBP3CA6NJZ7 1639 aa16.54■□□□□ 0.24
ITGB5-211ENST00000608107 RIMBP3BA6NNM3 1639 aa16.54■□□□□ 0.24
ITGB5-211ENST00000608107 RIMBP3Q9UFD9 1639 aa16.54■□□□□ 0.24
ITGB5-211ENST00000608107 ARHGAP35Q9NRY4 1499 aa16.54■□□□□ 0.24
ITGB5-211ENST00000608107 CLIP1P30622 1438 aa16.53■□□□□ 0.24
ITGB5-211ENST00000608107 DNAJC5Q9H3Z4 198 aa16.52■□□□□ 0.24
ITGB5-211ENST00000608107 CARMIL2Q6F5E8 1435 aa16.52■□□□□ 0.23
ITGB5-211ENST00000608107 TTBK1Q5TCY1 1321 aaPredicted RBP16.51■□□□□ 0.23
ITGB5-211ENST00000608107 FHOD3Q2V2M9 1422 aa16.51■□□□□ 0.23
ITGB5-211ENST00000608107 EFCAB5A4FU69 1503 aa16.5■□□□□ 0.23
ITGB5-211ENST00000608107 ARAP1Q96P48 1450 aa16.47■□□□□ 0.23
ITGB5-211ENST00000608107 PTPRGP23470 1445 aa16.44■□□□□ 0.22
ITGB5-211ENST00000608107 CYB5RLQ6IPT4 315 aa16.4■□□□□ 0.22
ITGB5-211ENST00000608107 PLB1Q6P1J6 1458 aa16.38■□□□□ 0.21
ITGB5-211ENST00000608107 ABCA8O94911 1581 aa16.35■□□□□ 0.21
ITGB5-211ENST00000608107 FMN1Q68DA7 1419 aa16.34■□□□□ 0.21
ITGB5-211ENST00000608107 PCF11O94913 1555 aaKnown RBP16.34■□□□□ 0.21
ITGB5-211ENST00000608107 RAPGEF6Q8TEU7 1601 aa16.34■□□□□ 0.21
ITGB5-211ENST00000608107 UACAQ9BZF9 1416 aa16.33■□□□□ 0.2
ITGB5-211ENST00000608107 ADCY10Q96PN6 1610 aa16.33■□□□□ 0.2
ITGB5-211ENST00000608107 VPS8Q8N3P4 1428 aa16.31■□□□□ 0.2
ITGB5-211ENST00000608107 ARID3CA6NKF2 412 aa16.31■□□□□ 0.2
ITGB5-211ENST00000608107 ATP1B4Q9UN42 357 aaPredicted RBP16.31■□□□□ 0.2
ITGB5-211ENST00000608107 LRRIQ1Q96JM4 1722 aa16.31■□□□□ 0.2
ITGB5-211ENST00000608107 ABCC2Q92887 1545 aa16.29■□□□□ 0.2
ITGB5-211ENST00000608107 UHRF1BP1LA0JNW5 1464 aa16.28■□□□□ 0.2
ITGB5-211ENST00000608107 NUP153P49790 1475 aaKnown RBP16.28■□□□□ 0.2
ITGB5-211ENST00000608107 CASKIN1Q8WXD9 1431 aa16.28■□□□□ 0.2
ITGB5-211ENST00000608107 FYCO1Q9BQS8 1478 aa16.25■□□□□ 0.19
ITGB5-211ENST00000608107 HECW1Q76N89 1606 aa16.25■□□□□ 0.19
ITGB5-211ENST00000608107 CDK13Q14004 1512 aaKnown RBP16.24■□□□□ 0.19
ITGB5-211ENST00000608107 ZCCHC11Q5TAX3 1644 aaKnown RBP16.23■□□□□ 0.19
ITGB5-211ENST00000608107 ATP10BO94823 1461 aa16.23■□□□□ 0.19
ITGB5-211ENST00000608107 KDM5BQ9UGL1 1544 aa16.22■□□□□ 0.19
ITGB5-211ENST00000608107 EPRSP07814 1512 aaKnown RBP16.21■□□□□ 0.19
ITGB5-211ENST00000608107 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.18■□□□□ 0.18
ITGB5-211ENST00000608107 HNRNPUL2Q1KMD3 747 aaKnown RBP16.18■□□□□ 0.18
ITGB5-211ENST00000608107 NPM1P06748 294 aaKnown RBP eCLIP16.17■□□□□ 0.18
ITGB5-211ENST00000608107 CFAP43Q8NDM7 1665 aa16.15■□□□□ 0.18
ITGB5-211ENST00000608107 CCDC18Q5T9S5 1454 aa16.15■□□□□ 0.18
ITGB5-211ENST00000608107 TIAM1Q13009 1591 aa16.14■□□□□ 0.17
ITGB5-211ENST00000608107 MAGI3Q5TCQ9 1506 aa16.14■□□□□ 0.17
ITGB5-211ENST00000608107 ASXL2Q76L83 1435 aa16.11■□□□□ 0.17
ITGB5-211ENST00000608107 KANK4Q5T7N3 995 aaPredicted RBP16.11■□□□□ 0.17
ITGB5-211ENST00000608107 PPARGC1BQ86YN6 1023 aaKnown RBP16.1■□□□□ 0.17
ITGB5-211ENST00000608107 MAPKBP1O60336 1514 aa16.09■□□□□ 0.17
ITGB5-211ENST00000608107 PLEKHD1A6NEE1 506 aa16.09■□□□□ 0.17
ITGB5-211ENST00000608107 APLP2Q06481 763 aa16.09■□□□□ 0.17
ITGB5-211ENST00000608107 MAP3K1Q13233 1512 aa16.09■□□□□ 0.17
ITGB5-211ENST00000608107 KCNH8Q96L42 1107 aa16.08■□□□□ 0.16
ITGB5-211ENST00000608107 WDR7Q9Y4E6 1490 aa16.08■□□□□ 0.16
ITGB5-211ENST00000608107 LRRC9Q6ZRR7 1453 aa16.06■□□□□ 0.16
ITGB5-211ENST00000608107 TROQ12816 1431 aaPredicted RBP16.06■□□□□ 0.16
ITGB5-211ENST00000608107 KIF14Q15058 1648 aa16.05■□□□□ 0.16
ITGB5-211ENST00000608107 MTUS2Q5JR59 1369 aa16.05■□□□□ 0.16
ITGB5-211ENST00000608107 CDK11AQ9UQ88 783 aaPredicted RBP16.05■□□□□ 0.16
ITGB5-211ENST00000608107 EHBP1L1Q8N3D4 1523 aa16.03■□□□□ 0.16
ITGB5-211ENST00000608107 KIF13AQ9H1H9 1805 aa16.03■□□□□ 0.16
ITGB5-211ENST00000608107 DIP2BQ9P265 1576 aa16■□□□□ 0.15
ITGB5-211ENST00000608107 ABCC10Q5T3U5 1492 aa15.99■□□□□ 0.15
ITGB5-211ENST00000608107 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.99■□□□□ 0.15
ITGB5-211ENST00000608107 TTC37Q6PGP7 1564 aa15.98■□□□□ 0.15
ITGB5-211ENST00000608107 SUPT6HQ7KZ85 1726 aaKnown RBP15.98■□□□□ 0.15
ITGB5-211ENST00000608107 FAM69CQ0P6D2 419 aa15.97■□□□□ 0.15
ITGB5-211ENST00000608107 TSPOAP1O95153 1857 aa15.96■□□□□ 0.15
ITGB5-211ENST00000608107 ABCA9Q8IUA7 1624 aa15.96■□□□□ 0.15
ITGB5-211ENST00000608107 NCOA2Q15596 1464 aa15.96■□□□□ 0.14
ITGB5-211ENST00000608107 GLI2P10070 1586 aa15.95■□□□□ 0.14
ITGB5-211ENST00000608107 TRHP20396 242 aaPredicted RBP15.94■□□□□ 0.14
ITGB5-211ENST00000608107 CDC42BPAQ5VT25 1732 aa15.94■□□□□ 0.14
ITGB5-211ENST00000608107 MAP3K4Q9Y6R4 1608 aa15.93■□□□□ 0.14
ITGB5-211ENST00000608107 MYO5CQ9NQX4 1742 aa15.91■□□□□ 0.14
ITGB5-211ENST00000608107 CDC42BPBQ9Y5S2 1711 aa15.91■□□□□ 0.14
ITGB5-211ENST00000608107 PHLDB1Q86UU1 1377 aa15.9■□□□□ 0.14
ITGB5-211ENST00000608107 CD109Q6YHK3 1445 aa15.9■□□□□ 0.14
ITGB5-211ENST00000608107 PPRC1Q5VV67 1664 aaKnown RBP15.89■□□□□ 0.13
ITGB5-211ENST00000608107 GPATCH8Q9UKJ3 1502 aaKnown RBP15.89■□□□□ 0.13
ITGB5-211ENST00000608107 CCNB3Q8WWL7 1395 aa15.88■□□□□ 0.13
ITGB5-211ENST00000608107 PREX2Q70Z35 1606 aa15.88■□□□□ 0.13
ITGB5-211ENST00000608107 PLCH2O75038 1416 aa15.86■□□□□ 0.13
ITGB5-211ENST00000608107 ITSN2Q9NZM3 1697 aa15.86■□□□□ 0.13
ITGB5-211ENST00000608107 MYOM3Q5VTT5 1437 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms