RNA–Protein interactions for RNA: ENST00000606296.1

SATB1-218, Transcript of SATB homeobox 1, humanhuman

Gene SATB1, Length 4,200 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-218ENST00000606296 ATAD2BQ9ULI0 1458 aa10.18□□□□□ -0.78
SATB1-218ENST00000606296 SYNJ1O43426 1573 aa10.17□□□□□ -0.78
SATB1-218ENST00000606296 CUX2O14529 1486 aa10.17□□□□□ -0.78
SATB1-218ENST00000606296 KIF21BO75037 1637 aa10.16□□□□□ -0.78
SATB1-218ENST00000606296 ZNF777Q9ULD5 760 aaPredicted RBP10.15□□□□□ -0.78
SATB1-218ENST00000606296 CARMIL1Q5VZK9 1371 aa10.15□□□□□ -0.79
SATB1-218ENST00000606296 SETD5Q9C0A6 1442 aa10.14□□□□□ -0.79
SATB1-218ENST00000606296 MRS2Q9HD23 443 aa10.14□□□□□ -0.79
SATB1-218ENST00000606296 SALL2Q9Y467 1007 aaPredicted RBP10.13□□□□□ -0.79
SATB1-218ENST00000606296 FBLN2P98095 1184 aa10.12□□□□□ -0.79
SATB1-218ENST00000606296 RBM19Q9Y4C8 960 aaKnown RBP10.12□□□□□ -0.79
SATB1-218ENST00000606296 FOXD1Q16676 465 aa10.1□□□□□ -0.79
SATB1-218ENST00000606296 ARAP1Q96P48 1450 aa10.1□□□□□ -0.79
SATB1-218ENST00000606296 PPP1R15AO75807 674 aaPredicted RBP10.1□□□□□ -0.79
SATB1-218ENST00000606296 EIF4G2P78344 907 aaKnown RBP eCLIP10.09□□□□□ -0.79
SATB1-218ENST00000606296 NBR1Q14596 966 aa10.08□□□□□ -0.8
SATB1-218ENST00000606296 NPM2Q86SE8 214 aaKnown RBP10.07□□□□□ -0.8
SATB1-218ENST00000606296 B4GALNT3Q6L9W6 998 aa10.07□□□□□ -0.8
SATB1-218ENST00000606296 FHOD3Q2V2M9 1422 aa10.06□□□□□ -0.8
SATB1-218ENST00000606296 EIF4G1Q04637 1599 aaKnown RBP10.05□□□□□ -0.8
SATB1-218ENST00000606296 RTL5Q5HYW3 569 aaPredicted RBP10.05□□□□□ -0.8
SATB1-218ENST00000606296 HSPA5P11021 654 aaKnown RBP10.04□□□□□ -0.8
SATB1-218ENST00000606296 KDM2AQ9Y2K7 1162 aa10.04□□□□□ -0.8
SATB1-218ENST00000606296 SLC4A1APQ9BWU0 796 aaKnown RBP10.04□□□□□ -0.8
SATB1-218ENST00000606296 PHLDB1Q86UU1 1377 aa10.03□□□□□ -0.8
SATB1-218ENST00000606296 CCER2I3L3R5 266 aa10.03□□□□□ -0.8
SATB1-218ENST00000606296 FHAD1B1AJZ9 1412 aa10.03□□□□□ -0.8
SATB1-218ENST00000606296 CCDC136Q96JN2 1154 aa10.02□□□□□ -0.81
SATB1-218ENST00000606296 IGF1RP08069 1367 aa10.01□□□□□ -0.81
SATB1-218ENST00000606296 ARHGAP35Q9NRY4 1499 aa10.01□□□□□ -0.81
SATB1-218ENST00000606296 TMC1Q8TDI8 760 aa10□□□□□ -0.81
SATB1-218ENST00000606296 MYT1LQ9UL68 1186 aa10□□□□□ -0.81
SATB1-218ENST00000606296 TIMELESSQ9UNS1 1208 aa9.99□□□□□ -0.81
SATB1-218ENST00000606296 TDRD9Q8NDG6 1382 aaKnown RBP9.99□□□□□ -0.81
SATB1-218ENST00000606296 PRXQ9BXM0 1461 aa9.99□□□□□ -0.81
SATB1-218ENST00000606296 DAXXQ9UER7 740 aaPredicted RBP9.99□□□□□ -0.81
SATB1-218ENST00000606296 RRBP1Q9P2E9 1410 aaKnown RBP9.98□□□□□ -0.81
SATB1-218ENST00000606296 BCL11AQ9H165 835 aa9.98□□□□□ -0.81
SATB1-218ENST00000606296 ANP32AP39687 249 aaKnown RBP9.98□□□□□ -0.81
SATB1-218ENST00000606296 L3MBTL2Q969R5 705 aa9.96□□□□□ -0.82
SATB1-218ENST00000606296 PPP4R2Q9NY27 417 aa9.96□□□□□ -0.82
SATB1-218ENST00000606296 WDR97A6NE52 1622 aa9.94□□□□□ -0.82
SATB1-218ENST00000606296 CADPSQ9ULU8 1353 aa9.94□□□□□ -0.82
SATB1-218ENST00000606296 CUX1P39880 1505 aa9.94□□□□□ -0.82
SATB1-218ENST00000606296 MPHOSPH9Q99550 1183 aa9.93□□□□□ -0.82
SATB1-218ENST00000606296 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.93□□□□□ -0.82
SATB1-218ENST00000606296 BICRAQ9NZM4 1560 aa9.93□□□□□ -0.82
SATB1-218ENST00000606296 TOP2BQ02880 1626 aa9.93□□□□□ -0.82
SATB1-218ENST00000606296 LRRC9Q6ZRR7 1453 aa9.93□□□□□ -0.82
SATB1-218ENST00000606296 RGL3Q3MIN7 710 aa9.92□□□□□ -0.82
SATB1-218ENST00000606296 ERICH3Q5RHP9 1530 aa9.91□□□□□ -0.82
SATB1-218ENST00000606296 RAD54L2Q9Y4B4 1467 aa9.91□□□□□ -0.82
SATB1-218ENST00000606296 FGD5Q6ZNL6 1462 aa9.91□□□□□ -0.82
SATB1-218ENST00000606296 ZBTB47Q9UFB7 747 aaPredicted RBP9.91□□□□□ -0.82
SATB1-218ENST00000606296 UNC13AQ9UPW8 1703 aa9.9□□□□□ -0.82
SATB1-218ENST00000606296 CCDC184Q52MB2 194 aa9.9□□□□□ -0.82
SATB1-218ENST00000606296 CFDP1Q9UEE9 299 aaPredicted RBP9.9□□□□□ -0.83
SATB1-218ENST00000606296 CCDC18Q5T9S5 1454 aa9.89□□□□□ -0.83
SATB1-218ENST00000606296 CARD11Q9BXL7 1154 aa9.88□□□□□ -0.83
SATB1-218ENST00000606296 FMN1Q68DA7 1419 aa9.87□□□□□ -0.83
SATB1-218ENST00000606296 WASHC2AQ641Q2 1341 aa9.87□□□□□ -0.83
SATB1-218ENST00000606296 PRKRIP1Q9H875 184 aaPredicted RBP9.87□□□□□ -0.83
SATB1-218ENST00000606296 TSPY4P0CV99 314 aa9.86□□□□□ -0.83
SATB1-218ENST00000606296 TSPY10P0CW01 314 aa9.86□□□□□ -0.83
SATB1-218ENST00000606296 FGD6Q6ZV73 1430 aa9.86□□□□□ -0.83
SATB1-218ENST00000606296 NCAPD3P42695 1498 aa9.85□□□□□ -0.83
SATB1-218ENST00000606296 CHMP7Q8WUX9 453 aaPredicted RBP9.85□□□□□ -0.83
SATB1-218ENST00000606296 NOP58Q9Y2X3 529 aaKnown RBP9.85□□□□□ -0.83
SATB1-218ENST00000606296 LAS1LQ9Y4W2 734 aaKnown RBP9.84□□□□□ -0.83
SATB1-218ENST00000606296 PKD2Q13563 968 aa9.84□□□□□ -0.83
SATB1-218ENST00000606296 CFTRP13569 1480 aa9.84□□□□□ -0.83
SATB1-218ENST00000606296 FANCD2Q9BXW9 1451 aa9.84□□□□□ -0.83
SATB1-218ENST00000606296 ZNF644Q9H582 1327 aaPredicted RBP9.84□□□□□ -0.83
SATB1-218ENST00000606296 TIAM1Q13009 1591 aa9.84□□□□□ -0.83
SATB1-218ENST00000606296 DEKP35659 375 aaKnown RBP9.83□□□□□ -0.84
SATB1-218ENST00000606296 DCAF11Q8TEB1 546 aa9.83□□□□□ -0.84
SATB1-218ENST00000606296 CC2D1BQ5T0F9 858 aaKnown RBP9.82□□□□□ -0.84
SATB1-218ENST00000606296 MAPKBP1O60336 1514 aa9.81□□□□□ -0.84
SATB1-218ENST00000606296 RTN4Q9NQC3 1192 aaKnown RBP9.81□□□□□ -0.84
SATB1-218ENST00000606296 MSH5O43196 834 aa9.8□□□□□ -0.84
SATB1-218ENST00000606296 UACAQ9BZF9 1416 aa9.8□□□□□ -0.84
SATB1-218ENST00000606296 C11orf95C9JLR9 678 aaPredicted RBP9.8□□□□□ -0.84
SATB1-218ENST00000606296 PLEKHD1A6NEE1 506 aa9.79□□□□□ -0.84
SATB1-218ENST00000606296 CANXP27824 592 aaKnown RBP9.79□□□□□ -0.84
SATB1-218ENST00000606296 NBPF8Q3BBV2 869 aa9.79□□□□□ -0.84
SATB1-218ENST00000606296 PEG3Q9GZU2 1588 aa9.78□□□□□ -0.84
SATB1-218ENST00000606296 SENP3Q9H4L4 574 aaPredicted RBP9.78□□□□□ -0.84
SATB1-218ENST00000606296 KIF7Q2M1P5 1343 aa9.78□□□□□ -0.84
SATB1-218ENST00000606296 NCOA2Q15596 1464 aa9.77□□□□□ -0.85
SATB1-218ENST00000606296 CASKIN1Q8WXD9 1431 aa9.77□□□□□ -0.85
SATB1-218ENST00000606296 NESP48681 1621 aa9.77□□□□□ -0.85
SATB1-218ENST00000606296 MYOM3Q5VTT5 1437 aa9.77□□□□□ -0.85
SATB1-218ENST00000606296 NUDCQ9Y266 331 aa9.77□□□□□ -0.85
SATB1-218ENST00000606296 CCDC7Q96M83 1385 aa9.76□□□□□ -0.85
SATB1-218ENST00000606296 ZBED9Q6R2W3 1325 aa9.75□□□□□ -0.85
SATB1-218ENST00000606296 ST20-MTHFSA0A0A6YYL1 179 aa9.75□□□□□ -0.85
SATB1-218ENST00000606296 PCF11O94913 1555 aaKnown RBP9.75□□□□□ -0.85
SATB1-218ENST00000606296 WDR43Q15061 677 aaKnown RBP eCLIP9.75□□□□□ -0.85
SATB1-218ENST00000606296 ERICH6BQ5W0A0 696 aa9.74□□□□□ -0.85
SATB1-218ENST00000606296 FANCIQ9NVI1 1328 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms