RNA–Protein interactions for RNA: ENST00000603679.1

VCAM1-205, Transcript of vascular cell adhesion molecule 1, humanhuman

Gene VCAM1, Length 3,865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-205ENST00000603679 CSRNP3Q8WYN3 585 aa5.84□□□□□ -1.47
VCAM1-205ENST00000603679 KDM6BO15054 1643 aa5.83□□□□□ -1.48
VCAM1-205ENST00000603679 ABCC10Q5T3U5 1492 aa5.83□□□□□ -1.48
VCAM1-205ENST00000603679 GRIN2AQ12879 1464 aa5.82□□□□□ -1.48
VCAM1-205ENST00000603679 ADAMTSL3P82987 1691 aa5.81□□□□□ -1.48
VCAM1-205ENST00000603679 SNAPC4Q5SXM2 1469 aa5.8□□□□□ -1.48
VCAM1-205ENST00000603679 FGD5Q6ZNL6 1462 aa5.78□□□□□ -1.48
VCAM1-205ENST00000603679 AMER1Q5JTC6 1135 aaPredicted RBP5.77□□□□□ -1.49
VCAM1-205ENST00000603679 GAPVD1Q14C86 1478 aa5.77□□□□□ -1.49
VCAM1-205ENST00000603679 CTTNBP2Q8WZ74 1663 aa5.77□□□□□ -1.49
VCAM1-205ENST00000603679 REREQ9P2R6 1566 aa5.76□□□□□ -1.49
VCAM1-205ENST00000603679 SLC4A1APQ9BWU0 796 aaKnown RBP5.76□□□□□ -1.49
VCAM1-205ENST00000603679 FHAD1B1AJZ9 1412 aa5.75□□□□□ -1.49
VCAM1-205ENST00000603679 UGGT2Q9NYU1 1516 aa5.74□□□□□ -1.49
VCAM1-205ENST00000603679 IQSEC2Q5JU85 1478 aa5.73□□□□□ -1.49
VCAM1-205ENST00000603679 MAGI3Q5TCQ9 1506 aa5.73□□□□□ -1.49
VCAM1-205ENST00000603679 ZMYM4Q5VZL5 1548 aa5.73□□□□□ -1.49
VCAM1-205ENST00000603679 ABCA9Q8IUA7 1624 aa5.72□□□□□ -1.49
VCAM1-205ENST00000603679 CFAP74Q9C0B2 1584 aa5.72□□□□□ -1.49
VCAM1-205ENST00000603679 ARAP3Q8WWN8 1544 aa5.71□□□□□ -1.5
VCAM1-205ENST00000603679 BCORL1Q5H9F3 1711 aa5.71□□□□□ -1.5
VCAM1-205ENST00000603679 FER1L4A9Z1Z3 1794 aa5.71□□□□□ -1.5
VCAM1-205ENST00000603679 ZCCHC11Q5TAX3 1644 aaKnown RBP5.71□□□□□ -1.5
VCAM1-205ENST00000603679 RICTORQ6R327 1708 aa5.69□□□□□ -1.5
VCAM1-205ENST00000603679 ABCA8O94911 1581 aa5.69□□□□□ -1.5
VCAM1-205ENST00000603679 FRMPD1Q5SYB0 1578 aa5.69□□□□□ -1.5
VCAM1-205ENST00000603679 MROH2AA6NES4 1674 aa5.69□□□□□ -1.5
VCAM1-205ENST00000603679 ABCC2Q92887 1545 aa5.68□□□□□ -1.5
VCAM1-205ENST00000603679 SOGA1O94964 1423 aa5.68□□□□□ -1.5
VCAM1-205ENST00000603679 TTC37Q6PGP7 1564 aa5.67□□□□□ -1.5
VCAM1-205ENST00000603679 SAMD9Q5K651 1589 aa5.67□□□□□ -1.5
VCAM1-205ENST00000603679 ZNF142P52746 1687 aaPredicted RBP5.67□□□□□ -1.5
VCAM1-205ENST00000603679 AQRO60306 1485 aaKnown RBP eCLIP5.67□□□□□ -1.5
VCAM1-205ENST00000603679 EPRSP07814 1512 aaKnown RBP5.66□□□□□ -1.5
VCAM1-205ENST00000603679 KIAA0556O60303 1618 aa5.66□□□□□ -1.5
VCAM1-205ENST00000603679 ADRA2BP18089 450 aa5.66□□□□□ -1.5
VCAM1-205ENST00000603679 HECW2Q9P2P5 1572 aa5.65□□□□□ -1.51
VCAM1-205ENST00000603679 FAM135AQ9P2D6 1515 aa5.65□□□□□ -1.51
VCAM1-205ENST00000603679 PLB1Q6P1J6 1458 aa5.64□□□□□ -1.51
VCAM1-205ENST00000603679 RAD54L2Q9Y4B4 1467 aa5.64□□□□□ -1.51
VCAM1-205ENST00000603679 PREX1Q8TCU6 1659 aa5.64□□□□□ -1.51
VCAM1-205ENST00000603679 PHLDB1Q86UU1 1377 aa5.64□□□□□ -1.51
VCAM1-205ENST00000603679 RTN4Q9NQC3 1192 aaKnown RBP5.64□□□□□ -1.51
VCAM1-205ENST00000603679 TEX14Q8IWB6 1497 aa5.63□□□□□ -1.51
VCAM1-205ENST00000603679 ARHGEF40Q8TER5 1519 aa5.63□□□□□ -1.51
VCAM1-205ENST00000603679 IQGAP2Q13576 1575 aa5.63□□□□□ -1.51
VCAM1-205ENST00000603679 DISP1Q96F81 1524 aa5.61□□□□□ -1.51
VCAM1-205ENST00000603679 NCBP3Q53F19 620 aaKnown RBP5.59□□□□□ -1.51
VCAM1-205ENST00000603679 WRNQ14191 1432 aaPredicted RBP eCLIP5.58□□□□□ -1.52
VCAM1-205ENST00000603679 SIGLEC1Q9BZZ2 1709 aa5.58□□□□□ -1.52
VCAM1-205ENST00000603679 PCF11O94913 1555 aaKnown RBP5.58□□□□□ -1.52
VCAM1-205ENST00000603679 LMTK3Q96Q04 1460 aa5.58□□□□□ -1.52
VCAM1-205ENST00000603679 STRCQ7RTU9 1775 aa5.58□□□□□ -1.52
VCAM1-205ENST00000603679 ADGRL1O94910 1474 aa5.56□□□□□ -1.52
VCAM1-205ENST00000603679 NEO1Q92859 1461 aa5.56□□□□□ -1.52
VCAM1-205ENST00000603679 KDM5AP29375 1690 aaKnown RBP5.56□□□□□ -1.52
VCAM1-205ENST00000603679 KDM5CP41229 1560 aa5.56□□□□□ -1.52
VCAM1-205ENST00000603679 ARHGEF12Q9NZN5 1544 aa5.56□□□□□ -1.52
VCAM1-205ENST00000603679 DCAF8L2P0C7V8 631 aa5.55□□□□□ -1.52
VCAM1-205ENST00000603679 FOXD1Q16676 465 aa5.55□□□□□ -1.52
VCAM1-205ENST00000603679 MAGI2Q86UL8 1455 aa5.55□□□□□ -1.52
VCAM1-205ENST00000603679 KIF21BO75037 1637 aa5.54□□□□□ -1.52
VCAM1-205ENST00000603679 AGLP35573 1532 aa5.53□□□□□ -1.52
VCAM1-205ENST00000603679 WDR7Q9Y4E6 1490 aa5.51□□□□□ -1.53
VCAM1-205ENST00000603679 TSPOAP1O95153 1857 aa5.51□□□□□ -1.53
VCAM1-205ENST00000603679 PPP4R3CPQ6ZMV5 832 aa5.51□□□□□ -1.53
VCAM1-205ENST00000603679 PRG4Q92954 1404 aaPredicted RBP5.5□□□□□ -1.53
VCAM1-205ENST00000603679 EFCAB5A4FU69 1503 aa5.49□□□□□ -1.53
VCAM1-205ENST00000603679 ITSN2Q9NZM3 1697 aa5.49□□□□□ -1.53
VCAM1-205ENST00000603679 PLXNC1O60486 1568 aa5.49□□□□□ -1.53
VCAM1-205ENST00000603679 FHOD3Q2V2M9 1422 aa5.48□□□□□ -1.53
VCAM1-205ENST00000603679 POLR1AO95602 1720 aaPredicted RBP5.48□□□□□ -1.53
VCAM1-205ENST00000603679 LRRIQ1Q96JM4 1722 aa5.48□□□□□ -1.53
VCAM1-205ENST00000603679 RAPGEF6Q8TEU7 1601 aa5.48□□□□□ -1.53
VCAM1-205ENST00000603679 LTBP4Q8N2S1 1624 aa5.48□□□□□ -1.53
VCAM1-205ENST00000603679 COL17A1Q9UMD9 1497 aaPredicted RBP5.48□□□□□ -1.53
VCAM1-205ENST00000603679 PPP6R1Q9UPN7 881 aa5.48□□□□□ -1.53
VCAM1-205ENST00000603679 TNIKQ9UKE5 1360 aa5.48□□□□□ -1.53
VCAM1-205ENST00000603679 DEPDC5O75140 1603 aa5.48□□□□□ -1.53
VCAM1-205ENST00000603679 MADDQ8WXG6 1647 aa5.48□□□□□ -1.53
VCAM1-205ENST00000603679 UACAQ9BZF9 1416 aa5.47□□□□□ -1.53
VCAM1-205ENST00000603679 GOLGA3Q08378 1498 aa5.47□□□□□ -1.53
VCAM1-205ENST00000603679 CAMSAP2Q08AD1 1489 aa5.47□□□□□ -1.53
VCAM1-205ENST00000603679 MYO5CQ9NQX4 1742 aa5.47□□□□□ -1.53
VCAM1-205ENST00000603679 TRIM41Q8WV44 630 aa5.47□□□□□ -1.53
VCAM1-205ENST00000603679 SYNMO15061 1565 aa5.46□□□□□ -1.53
VCAM1-205ENST00000603679 KDM4FA0A1W2PPD8 638 aa5.46□□□□□ -1.54
VCAM1-205ENST00000603679 ASXL2Q76L83 1435 aa5.46□□□□□ -1.54
VCAM1-205ENST00000603679 C3P01024 1663 aa5.46□□□□□ -1.54
VCAM1-205ENST00000603679 TDRD9Q8NDG6 1382 aaKnown RBP5.45□□□□□ -1.54
VCAM1-205ENST00000603679 ZC3H13Q5T200 1668 aaKnown RBP5.44□□□□□ -1.54
VCAM1-205ENST00000603679 PRXQ9BXM0 1461 aa5.44□□□□□ -1.54
VCAM1-205ENST00000603679 PREX2Q70Z35 1606 aa5.44□□□□□ -1.54
VCAM1-205ENST00000603679 PTPRTO14522 1441 aa5.44□□□□□ -1.54
VCAM1-205ENST00000603679 RIMS1Q86UR5 1692 aaKnown RBP5.43□□□□□ -1.54
VCAM1-205ENST00000603679 IGF1RP08069 1367 aa5.43□□□□□ -1.54
VCAM1-205ENST00000603679 ADGBQ8N7X0 1667 aa5.43□□□□□ -1.54
VCAM1-205ENST00000603679 INO80Q9ULG1 1556 aaPredicted RBP5.42□□□□□ -1.54
VCAM1-205ENST00000603679 LAMC1P11047 1609 aa5.42□□□□□ -1.54
VCAM1-205ENST00000603679 PTPRMP28827 1452 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms