RNA–Protein interactions for RNA: ENST00000602841.5

SCNM1-207, Transcript of sodium channel modifier 1, humanhuman

TSL 3

Gene SCNM1, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-207ENST00000602841 GRIN2BQ13224 1484 aa17.69■□□□□ 0.42
SCNM1-207ENST00000602841 ERICH3Q5RHP9 1530 aa17.66■□□□□ 0.42
SCNM1-207ENST00000602841 KIF21BO75037 1637 aa17.65■□□□□ 0.42
SCNM1-207ENST00000602841 RAPGEF2Q9Y4G8 1499 aa17.65■□□□□ 0.42
SCNM1-207ENST00000602841 FAM69CQ0P6D2 419 aa17.65■□□□□ 0.42
SCNM1-207ENST00000602841 CARMIL1Q5VZK9 1371 aa17.64■□□□□ 0.41
SCNM1-207ENST00000602841 GOLGA3Q08378 1498 aa17.58■□□□□ 0.41
SCNM1-207ENST00000602841 ABCC10Q5T3U5 1492 aa17.58■□□□□ 0.41
SCNM1-207ENST00000602841 EHMT2Q96KQ7 1210 aa17.57■□□□□ 0.4
SCNM1-207ENST00000602841 FBXO41Q8TF61 875 aa17.56■□□□□ 0.4
SCNM1-207ENST00000602841 TNIKQ9UKE5 1360 aa17.55■□□□□ 0.4
SCNM1-207ENST00000602841 PBRM1Q86U86 1689 aa17.55■□□□□ 0.4
SCNM1-207ENST00000602841 CEP170Q5SW79 1584 aa17.55■□□□□ 0.4
SCNM1-207ENST00000602841 CUL7Q14999 1698 aa17.54■□□□□ 0.4
SCNM1-207ENST00000602841 KDM6BO15054 1643 aa17.54■□□□□ 0.4
SCNM1-207ENST00000602841 FHAD1B1AJZ9 1412 aa17.53■□□□□ 0.4
SCNM1-207ENST00000602841 HECW2Q9P2P5 1572 aa17.53■□□□□ 0.4
SCNM1-207ENST00000602841 ADAMTS12P58397 1594 aa17.52■□□□□ 0.39
SCNM1-207ENST00000602841 ADGRL1O94910 1474 aa17.48■□□□□ 0.39
SCNM1-207ENST00000602841 NUP160Q12769 1436 aa17.47■□□□□ 0.39
SCNM1-207ENST00000602841 GRIN2AQ12879 1464 aa17.46■□□□□ 0.39
SCNM1-207ENST00000602841 DIP2BQ9P265 1576 aa17.45■□□□□ 0.38
SCNM1-207ENST00000602841 UBTFP17480 764 aaKnown RBP17.45■□□□□ 0.38
SCNM1-207ENST00000602841 SHROOM2Q13796 1616 aa17.43■□□□□ 0.38
SCNM1-207ENST00000602841 MAPKBP1O60336 1514 aa17.42■□□□□ 0.38
SCNM1-207ENST00000602841 NPM1P06748 294 aaKnown RBP eCLIP17.41■□□□□ 0.38
SCNM1-207ENST00000602841 CEP162Q5TB80 1403 aa17.38■□□□□ 0.37
SCNM1-207ENST00000602841 PRG4Q92954 1404 aaPredicted RBP17.38■□□□□ 0.37
SCNM1-207ENST00000602841 LMTK3Q96Q04 1460 aa17.37■□□□□ 0.37
SCNM1-207ENST00000602841 JPH4Q96JJ6 628 aa17.33■□□□□ 0.36
SCNM1-207ENST00000602841 TSPOAP1O95153 1857 aa17.31■□□□□ 0.36
SCNM1-207ENST00000602841 CLIP1P30622 1438 aa17.3■□□□□ 0.36
SCNM1-207ENST00000602841 KIAA0586Q9BVV6 1533 aa17.3■□□□□ 0.36
SCNM1-207ENST00000602841 ARHGAP35Q9NRY4 1499 aa17.29■□□□□ 0.36
SCNM1-207ENST00000602841 SOCS7O14512 581 aa17.27■□□□□ 0.36
SCNM1-207ENST00000602841 ILDR2Q71H61 639 aa17.27■□□□□ 0.36
SCNM1-207ENST00000602841 ADCY10Q96PN6 1610 aa17.27■□□□□ 0.36
SCNM1-207ENST00000602841 CTTNBP2Q8WZ74 1663 aa17.26■□□□□ 0.35
SCNM1-207ENST00000602841 COL17A1Q9UMD9 1497 aaPredicted RBP17.24■□□□□ 0.35
SCNM1-207ENST00000602841 UGGT2Q9NYU1 1516 aa17.22■□□□□ 0.35
SCNM1-207ENST00000602841 IQGAP2Q13576 1575 aa17.22■□□□□ 0.35
SCNM1-207ENST00000602841 RANGAP1P46060 587 aaPredicted RBP17.21■□□□□ 0.35
SCNM1-207ENST00000602841 SAMD9Q5K651 1589 aa17.2■□□□□ 0.34
SCNM1-207ENST00000602841 DISP1Q96F81 1524 aa17.19■□□□□ 0.34
SCNM1-207ENST00000602841 PPRC1Q5VV67 1664 aaKnown RBP17.15■□□□□ 0.34
SCNM1-207ENST00000602841 EFCAB5A4FU69 1503 aa17.15■□□□□ 0.34
SCNM1-207ENST00000602841 FHOD3Q2V2M9 1422 aa17.13■□□□□ 0.33
SCNM1-207ENST00000602841 VPS8Q8N3P4 1428 aa17.13■□□□□ 0.33
SCNM1-207ENST00000602841 P3H3Q8IVL6 736 aa17.13■□□□□ 0.33
SCNM1-207ENST00000602841 KIAA0556O60303 1618 aa17.08■□□□□ 0.32
SCNM1-207ENST00000602841 DISP3Q9P2K9 1392 aa17.08■□□□□ 0.32
SCNM1-207ENST00000602841 GLI2P10070 1586 aa17.07■□□□□ 0.32
SCNM1-207ENST00000602841 ASXL2Q76L83 1435 aa17.05■□□□□ 0.32
SCNM1-207ENST00000602841 PLB1Q6P1J6 1458 aa17.02■□□□□ 0.32
SCNM1-207ENST00000602841 CASKIN1Q8WXD9 1431 aa17■□□□□ 0.31
SCNM1-207ENST00000602841 ABCC2Q92887 1545 aa17■□□□□ 0.31
SCNM1-207ENST00000602841 FMN1Q68DA7 1419 aa16.99■□□□□ 0.31
SCNM1-207ENST00000602841 PTPRGP23470 1445 aa16.98■□□□□ 0.31
SCNM1-207ENST00000602841 CARMIL2Q6F5E8 1435 aa16.98■□□□□ 0.31
SCNM1-207ENST00000602841 PCF11O94913 1555 aaKnown RBP16.96■□□□□ 0.31
SCNM1-207ENST00000602841 TEX14Q8IWB6 1497 aa16.95■□□□□ 0.3
SCNM1-207ENST00000602841 TTBK1Q5TCY1 1321 aaPredicted RBP16.95■□□□□ 0.3
SCNM1-207ENST00000602841 EPRSP07814 1512 aaKnown RBP16.94■□□□□ 0.3
SCNM1-207ENST00000602841 FYCO1Q9BQS8 1478 aa16.93■□□□□ 0.3
SCNM1-207ENST00000602841 KANK4Q5T7N3 995 aaPredicted RBP16.93■□□□□ 0.3
SCNM1-207ENST00000602841 CERKQ8TCT0 537 aa16.93■□□□□ 0.3
SCNM1-207ENST00000602841 MAP3K4Q9Y6R4 1608 aa16.92■□□□□ 0.3
SCNM1-207ENST00000602841 MAP3K1Q13233 1512 aa16.92■□□□□ 0.3
SCNM1-207ENST00000602841 ABCA8O94911 1581 aa16.91■□□□□ 0.3
SCNM1-207ENST00000602841 PTPRMP28827 1452 aa16.89■□□□□ 0.29
SCNM1-207ENST00000602841 NUP153P49790 1475 aaKnown RBP16.89■□□□□ 0.29
SCNM1-207ENST00000602841 PPARGC1BQ86YN6 1023 aaKnown RBP16.89■□□□□ 0.29
SCNM1-207ENST00000602841 LRRIQ1Q96JM4 1722 aa16.89■□□□□ 0.29
SCNM1-207ENST00000602841 TIAM1Q13009 1591 aa16.86■□□□□ 0.29
SCNM1-207ENST00000602841 RAPGEF6Q8TEU7 1601 aa16.85■□□□□ 0.29
SCNM1-207ENST00000602841 UHRF1BP1LA0JNW5 1464 aa16.85■□□□□ 0.29
SCNM1-207ENST00000602841 MAGI3Q5TCQ9 1506 aa16.83■□□□□ 0.28
SCNM1-207ENST00000602841 UACAQ9BZF9 1416 aa16.83■□□□□ 0.28
SCNM1-207ENST00000602841 HECW1Q76N89 1606 aa16.81■□□□□ 0.28
SCNM1-207ENST00000602841 LRRC9Q6ZRR7 1453 aa16.81■□□□□ 0.28
SCNM1-207ENST00000602841 CFAP43Q8NDM7 1665 aa16.81■□□□□ 0.28
SCNM1-207ENST00000602841 CDK13Q14004 1512 aaKnown RBP16.8■□□□□ 0.28
SCNM1-207ENST00000602841 ATP10BO94823 1461 aa16.8■□□□□ 0.28
SCNM1-207ENST00000602841 HSPA2P54652 639 aa16.8■□□□□ 0.28
SCNM1-207ENST00000602841 KDM5BQ9UGL1 1544 aa16.8■□□□□ 0.28
SCNM1-207ENST00000602841 ATP1B4Q9UN42 357 aaPredicted RBP16.78■□□□□ 0.28
SCNM1-207ENST00000602841 ADAMTSL3P82987 1691 aa16.78■□□□□ 0.28
SCNM1-207ENST00000602841 SPATA31D1Q6ZQQ2 1576 aa16.77■□□□□ 0.28
SCNM1-207ENST00000602841 CCDC18Q5T9S5 1454 aa16.77■□□□□ 0.28
SCNM1-207ENST00000602841 ARID3CA6NKF2 412 aa16.74■□□□□ 0.27
SCNM1-207ENST00000602841 APLP2Q06481 763 aa16.74■□□□□ 0.27
SCNM1-207ENST00000602841 CD109Q6YHK3 1445 aa16.73■□□□□ 0.27
SCNM1-207ENST00000602841 WDR7Q9Y4E6 1490 aa16.69■□□□□ 0.26
SCNM1-207ENST00000602841 PHLDB1Q86UU1 1377 aa16.69■□□□□ 0.26
SCNM1-207ENST00000602841 ZCCHC11Q5TAX3 1644 aaKnown RBP16.68■□□□□ 0.26
SCNM1-207ENST00000602841 TRIM26Q12899 539 aaPredicted RBP16.68■□□□□ 0.26
SCNM1-207ENST00000602841 EHBP1L1Q8N3D4 1523 aa16.66■□□□□ 0.26
SCNM1-207ENST00000602841 TROQ12816 1431 aaPredicted RBP16.66■□□□□ 0.26
SCNM1-207ENST00000602841 MTUS2Q5JR59 1369 aa16.65■□□□□ 0.26
SCNM1-207ENST00000602841 KCNH8Q96L42 1107 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms