RNA–Protein interactions for RNA: ENST00000602398.2

SBNO1-203, Transcript of strawberry notch homolog 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SBNO1, Length 4,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1-203ENST00000602398 RGL3Q3MIN7 710 aa12.87□□□□□ -0.35
SBNO1-203ENST00000602398 CFDP1Q9UEE9 299 aaPredicted RBP12.87□□□□□ -0.35
SBNO1-203ENST00000602398 STAG3Q9UJ98 1225 aa12.86□□□□□ -0.35
SBNO1-203ENST00000602398 SENP3-EIF4A1A0A087X0R7 540 aa12.85□□□□□ -0.35
SBNO1-203ENST00000602398 ARID4BQ4LE39 1312 aaPredicted RBP12.84□□□□□ -0.35
SBNO1-203ENST00000602398 AQRO60306 1485 aaKnown RBP eCLIP12.82□□□□□ -0.369e-8■■■■■ 30.5
SBNO1-203ENST00000602398 CEP164Q9UPV0 1460 aa12.82□□□□□ -0.36
SBNO1-203ENST00000602398 TNIKQ9UKE5 1360 aa12.81□□□□□ -0.36
SBNO1-203ENST00000602398 CC2D2AQ9P2K1 1620 aa12.81□□□□□ -0.36
SBNO1-203ENST00000602398 JPH4Q96JJ6 628 aa12.81□□□□□ -0.36
SBNO1-203ENST00000602398 CENPBP07199 599 aaPredicted RBP12.8□□□□□ -0.36
SBNO1-203ENST00000602398 RAPGEF2Q9Y4G8 1499 aa12.79□□□□□ -0.36
SBNO1-203ENST00000602398 BICRAQ9NZM4 1560 aa12.79□□□□□ -0.36
SBNO1-203ENST00000602398 FOXD1Q16676 465 aa12.78□□□□□ -0.36
SBNO1-203ENST00000602398 SIN3AQ96ST3 1273 aa12.78□□□□□ -0.36
SBNO1-203ENST00000602398 FHOD3Q2V2M9 1422 aa12.76□□□□□ -0.37
SBNO1-203ENST00000602398 NCAPD3P42695 1498 aa12.76□□□□□ -0.37
SBNO1-203ENST00000602398 EEA1Q15075 1411 aa12.76□□□□□ -0.37
SBNO1-203ENST00000602398 DDX10Q13206 875 aaKnown RBP12.73□□□□□ -0.37
SBNO1-203ENST00000602398 FGD5Q6ZNL6 1462 aa12.72□□□□□ -0.37
SBNO1-203ENST00000602398 BCL11AQ9H165 835 aa12.71□□□□□ -0.37
SBNO1-203ENST00000602398 GGT6Q6P531 493 aa12.7□□□□□ -0.38
SBNO1-203ENST00000602398 SALL2Q9Y467 1007 aaPredicted RBP12.7□□□□□ -0.38
SBNO1-203ENST00000602398 TONSLQ96HA7 1378 aa12.69□□□□□ -0.38
SBNO1-203ENST00000602398 SLC24A1O60721 1099 aa12.69□□□□□ -0.38
SBNO1-203ENST00000602398 IGF1RP08069 1367 aa12.68□□□□□ -0.38
SBNO1-203ENST00000602398 HNRNPMP52272 730 aaKnown RBP eCLIP12.67□□□□□ -0.38
SBNO1-203ENST00000602398 OSCARQ8IYS5 282 aa12.66□□□□□ -0.38
SBNO1-203ENST00000602398 ZNF316A6NFI3 1004 aaPredicted RBP12.66□□□□□ -0.38
SBNO1-203ENST00000602398 CCNB3Q8WWL7 1395 aa12.63□□□□□ -0.39
SBNO1-203ENST00000602398 NEFLP07196 543 aa12.62□□□□□ -0.39
SBNO1-203ENST00000602398 NUTM2DQ5VT03 806 aaPredicted RBP12.61□□□□□ -0.39
SBNO1-203ENST00000602398 GAPVD1Q14C86 1478 aa12.6□□□□□ -0.39
SBNO1-203ENST00000602398 SCAF1Q9H7N4 1312 aaKnown RBP12.6□□□□□ -0.39
SBNO1-203ENST00000602398 SAFB2Q14151 953 aaKnown RBP eCLIP12.58□□□□□ -0.39
SBNO1-203ENST00000602398 ZNF644Q9H582 1327 aaPredicted RBP12.58□□□□□ -0.39
SBNO1-203ENST00000602398 ANP32CO43423 234 aa12.58□□□□□ -0.4
SBNO1-203ENST00000602398 PPP1R15AO75807 674 aaPredicted RBP12.58□□□□□ -0.4
SBNO1-203ENST00000602398 CFTRP13569 1480 aa12.57□□□□□ -0.4
SBNO1-203ENST00000602398 VPS8Q8N3P4 1428 aa12.56□□□□□ -0.4
SBNO1-203ENST00000602398 CARMIL2Q6F5E8 1435 aa12.56□□□□□ -0.4
SBNO1-203ENST00000602398 UNC13AQ9UPW8 1703 aa12.55□□□□□ -0.4
SBNO1-203ENST00000602398 SYNJ1O43426 1573 aa12.55□□□□□ -0.4
SBNO1-203ENST00000602398 ZBTB7CA1YPR0 619 aa12.54□□□□□ -0.4
SBNO1-203ENST00000602398 FAM9BQ8IZU0 186 aa12.54□□□□□ -0.4
SBNO1-203ENST00000602398 C14orf37Q86TY3 774 aa12.53□□□□□ -0.4
SBNO1-203ENST00000602398 FHAD1B1AJZ9 1412 aa12.53□□□□□ -0.4
SBNO1-203ENST00000602398 PTPRGP23470 1445 aa12.52□□□□□ -0.4
SBNO1-203ENST00000602398 PELP1Q8IZL8 1130 aaKnown RBP12.52□□□□□ -0.41
SBNO1-203ENST00000602398 KIF3BO15066 747 aa12.52□□□□□ -0.41
SBNO1-203ENST00000602398 TMC1Q8TDI8 760 aa12.52□□□□□ -0.41
SBNO1-203ENST00000602398 DCAF11Q8TEB1 546 aa12.5□□□□□ -0.41
SBNO1-203ENST00000602398 POLA1P09884 1462 aaPredicted RBP12.49□□□□□ -0.41
SBNO1-203ENST00000602398 PKD2Q13563 968 aa12.49□□□□□ -0.41
SBNO1-203ENST00000602398 FAM69CQ0P6D2 419 aa12.49□□□□□ -0.41
SBNO1-203ENST00000602398 CUX1P39880 1505 aa12.49□□□□□ -0.41
SBNO1-203ENST00000602398 EFCAB2Q5VUJ9 269 aa12.48□□□□□ -0.41
SBNO1-203ENST00000602398 TOPBP1Q92547 1522 aa12.47□□□□□ -0.41
SBNO1-203ENST00000602398 STK26Q9P289 416 aa12.47□□□□□ -0.41
SBNO1-203ENST00000602398 TNNT2P45379 298 aaPredicted RBP12.47□□□□□ -0.41
SBNO1-203ENST00000602398 A0A0G2JS52 829 aa12.46□□□□□ -0.41
SBNO1-203ENST00000602398 SOX12O15370 315 aa12.46□□□□□ -0.41
SBNO1-203ENST00000602398 MIER1Q8N108 512 aa12.46□□□□□ -0.42
SBNO1-203ENST00000602398 LMOD2Q6P5Q4 547 aa12.46□□□□□ -0.42
SBNO1-203ENST00000602398 AFAP1Q8N556 730 aa12.44□□□□□ -0.42
SBNO1-203ENST00000602398 NUTM2FA1L443 756 aa12.43□□□□□ -0.42
SBNO1-203ENST00000602398 PPM1GO15355 546 aaPredicted RBP12.43□□□□□ -0.42
SBNO1-203ENST00000602398 ZNF608Q9ULD9 1512 aaPredicted RBP12.43□□□□□ -0.42
SBNO1-203ENST00000602398 FMN1Q68DA7 1419 aa12.43□□□□□ -0.42
SBNO1-203ENST00000602398 CARD11Q9BXL7 1154 aa12.43□□□□□ -0.42
SBNO1-203ENST00000602398 NUP155O75694 1391 aa12.41□□□□□ -0.42
SBNO1-203ENST00000602398 ARHGAP35Q9NRY4 1499 aa12.41□□□□□ -0.42
SBNO1-203ENST00000602398 MRC2Q9UBG0 1479 aa12.4□□□□□ -0.42
SBNO1-203ENST00000602398 RAB3GAP2Q9H2M9 1393 aa12.4□□□□□ -0.42
SBNO1-203ENST00000602398 EIF4G2P78344 907 aaKnown RBP eCLIP12.4□□□□□ -0.43
SBNO1-203ENST00000602398 HNRNPUQ00839 825 aaKnown RBP eCLIP12.39□□□□□ -0.43
SBNO1-203ENST00000602398 SPAG9O60271 1321 aaKnown RBP12.39□□□□□ -0.43
SBNO1-203ENST00000602398 MPHOSPH9Q99550 1183 aa12.38□□□□□ -0.43
SBNO1-203ENST00000602398 HMGXB3Q12766 1538 aa12.38□□□□□ -0.43
SBNO1-203ENST00000602398 SNAPC4Q5SXM2 1469 aa12.38□□□□□ -0.43
SBNO1-203ENST00000602398 PRG4Q92954 1404 aaPredicted RBP12.38□□□□□ -0.43
SBNO1-203ENST00000602398 GTF3C3Q9Y5Q9 886 aa12.37□□□□□ -0.43
SBNO1-203ENST00000602398 GRIN2BQ13224 1484 aa12.36□□□□□ -0.43
SBNO1-203ENST00000602398 RAPGEF3O95398 923 aa12.36□□□□□ -0.43
SBNO1-203ENST00000602398 ARAP1Q96P48 1450 aa12.35□□□□□ -0.43
SBNO1-203ENST00000602398 IRX6P78412 446 aaPredicted RBP12.35□□□□□ -0.43
SBNO1-203ENST00000602398 WASHC2CQ9Y4E1 1318 aa12.35□□□□□ -0.43
SBNO1-203ENST00000602398 MRS2Q9HD23 443 aa12.35□□□□□ -0.43
SBNO1-203ENST00000602398 POGKQ9P215 609 aa12.35□□□□□ -0.43
SBNO1-203ENST00000602398 URB2Q14146 1524 aaKnown RBP12.34□□□□□ -0.43
SBNO1-203ENST00000602398 NEUROD2Q15784 382 aa12.32□□□□□ -0.44
SBNO1-203ENST00000602398 PHLDB1Q86UU1 1377 aa12.32□□□□□ -0.44
SBNO1-203ENST00000602398 CC2D1BQ5T0F9 858 aaKnown RBP12.32□□□□□ -0.44
SBNO1-203ENST00000602398 SETD5Q9C0A6 1442 aa12.31□□□□□ -0.44
SBNO1-203ENST00000602398 L3MBTL2Q969R5 705 aa12.3□□□□□ -0.44
SBNO1-203ENST00000602398 CLSPNQ9HAW4 1339 aa12.3□□□□□ -0.44
SBNO1-203ENST00000602398 PRDM2Q13029 1718 aa12.29□□□□□ -0.44
SBNO1-203ENST00000602398 CANXP27824 592 aaKnown RBP12.27□□□□□ -0.45
SBNO1-203ENST00000602398 NEFMP07197 916 aa12.26□□□□□ -0.45
SBNO1-203ENST00000602398 SRPK2P78362 688 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms