RNA–Protein interactions for RNA: ENST00000601354.1

COLGALT1-206, Transcript of collagen beta(1-O)galactosyltransferase 1, humanhuman

TSL 5

Gene COLGALT1, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1-206ENST00000601354 ARHGAP35Q9NRY4 1499 aa19.03■□□□□ 0.64
COLGALT1-206ENST00000601354 ARAP1Q96P48 1450 aa19.01■□□□□ 0.63
COLGALT1-206ENST00000601354 EFCAB5A4FU69 1503 aa19■□□□□ 0.63
COLGALT1-206ENST00000601354 VPS8Q8N3P4 1428 aa19■□□□□ 0.63
COLGALT1-206ENST00000601354 IQGAP2Q13576 1575 aa18.98■□□□□ 0.63
COLGALT1-206ENST00000601354 RANGAP1P46060 587 aaPredicted RBP18.97■□□□□ 0.63
COLGALT1-206ENST00000601354 SAMD9Q5K651 1589 aa18.96■□□□□ 0.63
COLGALT1-206ENST00000601354 CHD1O14646 1710 aa18.94■□□□□ 0.62
COLGALT1-206ENST00000601354 CEP170Q5SW79 1584 aa18.93■□□□□ 0.62
COLGALT1-206ENST00000601354 KIAA0586Q9BVV6 1533 aa18.93■□□□□ 0.62
COLGALT1-206ENST00000601354 CHMP7Q8WUX9 453 aaPredicted RBP18.92■□□□□ 0.62
COLGALT1-206ENST00000601354 NUP160Q12769 1436 aa18.91■□□□□ 0.62
COLGALT1-206ENST00000601354 OSCARQ8IYS5 282 aa18.89■□□□□ 0.61
COLGALT1-206ENST00000601354 UGGT2Q9NYU1 1516 aa18.89■□□□□ 0.61
COLGALT1-206ENST00000601354 FHOD3Q2V2M9 1422 aa18.83■□□□□ 0.61
COLGALT1-206ENST00000601354 FBLN2P98095 1184 aa18.83■□□□□ 0.6
COLGALT1-206ENST00000601354 KIAA0556O60303 1618 aa18.79■□□□□ 0.6
COLGALT1-206ENST00000601354 PCF11O94913 1555 aaKnown RBP18.78■□□□□ 0.6
COLGALT1-206ENST00000601354 DISP1Q96F81 1524 aa18.78■□□□□ 0.6
COLGALT1-206ENST00000601354 FMN1Q68DA7 1419 aa18.77■□□□□ 0.6
COLGALT1-206ENST00000601354 P3H3Q8IVL6 736 aa18.77■□□□□ 0.6
COLGALT1-206ENST00000601354 FYCO1Q9BQS8 1478 aa18.74■□□□□ 0.59
COLGALT1-206ENST00000601354 MAP3K1Q13233 1512 aa18.74■□□□□ 0.59
COLGALT1-206ENST00000601354 CASKIN1Q8WXD9 1431 aa18.74■□□□□ 0.59
COLGALT1-206ENST00000601354 CFAP43Q8NDM7 1665 aa18.73■□□□□ 0.59
COLGALT1-206ENST00000601354 SHROOM2Q13796 1616 aa18.72■□□□□ 0.59
COLGALT1-206ENST00000601354 APLP2Q06481 763 aa18.71■□□□□ 0.59
COLGALT1-206ENST00000601354 RIMBP3CA6NJZ7 1639 aa18.71■□□□□ 0.58
COLGALT1-206ENST00000601354 RIMBP3BA6NNM3 1639 aa18.71■□□□□ 0.58
COLGALT1-206ENST00000601354 RIMBP3Q9UFD9 1639 aa18.71■□□□□ 0.58
COLGALT1-206ENST00000601354 CLASP1Q7Z460 1538 aa18.7■□□□□ 0.58
COLGALT1-206ENST00000601354 TIAM1Q13009 1591 aa18.7■□□□□ 0.58
COLGALT1-206ENST00000601354 TRIM26Q12899 539 aaPredicted RBP18.69■□□□□ 0.58
COLGALT1-206ENST00000601354 PPARGC1BQ86YN6 1023 aaKnown RBP18.69■□□□□ 0.58
COLGALT1-206ENST00000601354 JPH4Q96JJ6 628 aa18.68■□□□□ 0.58
COLGALT1-206ENST00000601354 LRRIQ1Q96JM4 1722 aa18.67■□□□□ 0.58
COLGALT1-206ENST00000601354 CARMIL2Q6F5E8 1435 aa18.66■□□□□ 0.58
COLGALT1-206ENST00000601354 AEBP2Q6ZN18 517 aaPredicted RBP18.66■□□□□ 0.58
COLGALT1-206ENST00000601354 HECW1Q76N89 1606 aa18.63■□□□□ 0.57
COLGALT1-206ENST00000601354 PRG4Q92954 1404 aaPredicted RBP18.6■□□□□ 0.57
COLGALT1-206ENST00000601354 TRHP20396 242 aaPredicted RBP18.6■□□□□ 0.57
COLGALT1-206ENST00000601354 PCGF6Q9BYE7 350 aa18.6■□□□□ 0.57
COLGALT1-206ENST00000601354 RAPGEF6Q8TEU7 1601 aa18.6■□□□□ 0.57
COLGALT1-206ENST00000601354 LRRC9Q6ZRR7 1453 aa18.58■□□□□ 0.56
COLGALT1-206ENST00000601354 KANK4Q5T7N3 995 aaPredicted RBP18.57■□□□□ 0.56
COLGALT1-206ENST00000601354 CCDC18Q5T9S5 1454 aa18.57■□□□□ 0.56
COLGALT1-206ENST00000601354 TTBK1Q5TCY1 1321 aaPredicted RBP18.55■□□□□ 0.56
COLGALT1-206ENST00000601354 ARHGEF11O15085 1522 aa18.55■□□□□ 0.56
COLGALT1-206ENST00000601354 ABCA8O94911 1581 aa18.53■□□□□ 0.56
COLGALT1-206ENST00000601354 ATP1B4Q9UN42 357 aaPredicted RBP18.53■□□□□ 0.56
COLGALT1-206ENST00000601354 EPRSP07814 1512 aaKnown RBP18.53■□□□□ 0.56
COLGALT1-206ENST00000601354 ERCC6L2Q5T890 1561 aa18.52■□□□□ 0.56
COLGALT1-206ENST00000601354 NUP153P49790 1475 aaKnown RBP18.51■□□□□ 0.55
COLGALT1-206ENST00000601354 CYB5RLQ6IPT4 315 aa18.49■□□□□ 0.55
COLGALT1-206ENST00000601354 PLB1Q6P1J6 1458 aa18.49■□□□□ 0.55
COLGALT1-206ENST00000601354 CDK13Q14004 1512 aaKnown RBP18.48■□□□□ 0.55
COLGALT1-206ENST00000601354 EHBP1L1Q8N3D4 1523 aa18.48■□□□□ 0.55
COLGALT1-206ENST00000601354 PTPRGP23470 1445 aa18.47■□□□□ 0.55
COLGALT1-206ENST00000601354 MAGI3Q5TCQ9 1506 aa18.45■□□□□ 0.54
COLGALT1-206ENST00000601354 SUPT6HQ7KZ85 1726 aaKnown RBP18.44■□□□□ 0.54
COLGALT1-206ENST00000601354 MTUS2Q5JR59 1369 aa18.42■□□□□ 0.54
COLGALT1-206ENST00000601354 RRBP1Q9P2E9 1410 aaKnown RBP18.41■□□□□ 0.54
COLGALT1-206ENST00000601354 UACAQ9BZF9 1416 aa18.4■□□□□ 0.54
COLGALT1-206ENST00000601354 ABCC2Q92887 1545 aa18.38■□□□□ 0.53
COLGALT1-206ENST00000601354 PHLDB1Q86UU1 1377 aa18.37■□□□□ 0.53
COLGALT1-206ENST00000601354 NCOA2Q15596 1464 aa18.36■□□□□ 0.53
COLGALT1-206ENST00000601354 UHRF1BP1LA0JNW5 1464 aa18.35■□□□□ 0.53
COLGALT1-206ENST00000601354 ATP10BO94823 1461 aa18.35■□□□□ 0.53
COLGALT1-206ENST00000601354 ADCY10Q96PN6 1610 aa18.34■□□□□ 0.53
COLGALT1-206ENST00000601354 CCNB3Q8WWL7 1395 aa18.32■□□□□ 0.52
COLGALT1-206ENST00000601354 ARID3CA6NKF2 412 aa18.32■□□□□ 0.52
COLGALT1-206ENST00000601354 CDK11AQ9UQ88 783 aaPredicted RBP18.32■□□□□ 0.52
COLGALT1-206ENST00000601354 TROQ12816 1431 aaPredicted RBP18.32■□□□□ 0.52
COLGALT1-206ENST00000601354 MYOM3Q5VTT5 1437 aa18.29■□□□□ 0.52
COLGALT1-206ENST00000601354 ZCCHC11Q5TAX3 1644 aaKnown RBP18.27■□□□□ 0.52
COLGALT1-206ENST00000601354 FGD6Q6ZV73 1430 aa18.27■□□□□ 0.52
COLGALT1-206ENST00000601354 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.27■□□□□ 0.52
COLGALT1-206ENST00000601354 HNRNPUL2Q1KMD3 747 aaKnown RBP18.27■□□□□ 0.52
COLGALT1-206ENST00000601354 KDM5BQ9UGL1 1544 aa18.27■□□□□ 0.51
COLGALT1-206ENST00000601354 KIF14Q15058 1648 aa18.26■□□□□ 0.51
COLGALT1-206ENST00000601354 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.26■□□□□ 0.51
COLGALT1-206ENST00000601354 ITSN2Q9NZM3 1697 aa18.23■□□□□ 0.51
COLGALT1-206ENST00000601354 PTPN23Q9H3S7 1636 aa18.23■□□□□ 0.51
COLGALT1-206ENST00000601354 PLEKHD1A6NEE1 506 aa18.22■□□□□ 0.51
COLGALT1-206ENST00000601354 MIA2Q96PC5 1412 aa18.21■□□□□ 0.51
COLGALT1-206ENST00000601354 TCOF1Q13428 1488 aaKnown RBP18.2■□□□□ 0.5
COLGALT1-206ENST00000601354 ABCC10Q5T3U5 1492 aa18.19■□□□□ 0.5
COLGALT1-206ENST00000601354 CDC42BPAQ5VT25 1732 aa18.18■□□□□ 0.5
COLGALT1-206ENST00000601354 GPATCH8Q9UKJ3 1502 aaKnown RBP18.14■□□□□ 0.49
COLGALT1-206ENST00000601354 FAM50AQ14320 339 aaKnown RBP18.14■□□□□ 0.49
COLGALT1-206ENST00000601354 PREX2Q70Z35 1606 aa18.11■□□□□ 0.49
COLGALT1-206ENST00000601354 TTC37Q6PGP7 1564 aa18.1■□□□□ 0.49
COLGALT1-206ENST00000601354 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.1■□□□□ 0.49
COLGALT1-206ENST00000601354 CDC42BPBQ9Y5S2 1711 aa18.09■□□□□ 0.49
COLGALT1-206ENST00000601354 MYO5CQ9NQX4 1742 aa18.09■□□□□ 0.49
COLGALT1-206ENST00000601354 DNMT1P26358 1616 aaKnown RBP18.07■□□□□ 0.48
COLGALT1-206ENST00000601354 WDR7Q9Y4E6 1490 aa18.07■□□□□ 0.48
COLGALT1-206ENST00000601354 CAMSAP2Q08AD1 1489 aa18.06■□□□□ 0.48
COLGALT1-206ENST00000601354 ITGAEP38570 1179 aa18.05■□□□□ 0.48
COLGALT1-206ENST00000601354 PTPRKQ15262 1439 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms