RNA–Protein interactions for RNA: ENST00000600419.5

ERVK-28-203, Transcript of endogenous retrovirus group K member 28, humanhuman

TSL 1 (best) BASIC

Gene ERVK-28, Length 457 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERVK-28-203ENST00000600419 SNAPC4Q5SXM2 1469 aa8.44□□□□□ -1.06
ERVK-28-203ENST00000600419 IQGAP2Q13576 1575 aa8.44□□□□□ -1.06
ERVK-28-203ENST00000600419 RANGAP1P46060 587 aaPredicted RBP8.43□□□□□ -1.06
ERVK-28-203ENST00000600419 ARHGAP35Q9NRY4 1499 aa8.43□□□□□ -1.06
ERVK-28-203ENST00000600419 SYNJ2O15056 1496 aa8.42□□□□□ -1.06
ERVK-28-203ENST00000600419 ARAP1Q96P48 1450 aa8.42□□□□□ -1.06
ERVK-28-203ENST00000600419 GRIN2AQ12879 1464 aa8.41□□□□□ -1.06
ERVK-28-203ENST00000600419 SAMD9Q5K651 1589 aa8.4□□□□□ -1.06
ERVK-28-203ENST00000600419 CHMP7Q8WUX9 453 aaPredicted RBP8.39□□□□□ -1.07
ERVK-28-203ENST00000600419 FMN1Q68DA7 1419 aa8.38□□□□□ -1.07
ERVK-28-203ENST00000600419 CHD1O14646 1710 aa8.38□□□□□ -1.07
ERVK-28-203ENST00000600419 PCGF6Q9BYE7 350 aa8.38□□□□□ -1.07
ERVK-28-203ENST00000600419 MAP3K1Q13233 1512 aa8.38□□□□□ -1.07
ERVK-28-203ENST00000600419 KIAA0586Q9BVV6 1533 aa8.38□□□□□ -1.07
ERVK-28-203ENST00000600419 UGGT2Q9NYU1 1516 aa8.37□□□□□ -1.07
ERVK-28-203ENST00000600419 CFAP43Q8NDM7 1665 aa8.37□□□□□ -1.07
ERVK-28-203ENST00000600419 FYCO1Q9BQS8 1478 aa8.36□□□□□ -1.07
ERVK-28-203ENST00000600419 FBLN2P98095 1184 aa8.34□□□□□ -1.07
ERVK-28-203ENST00000600419 PCF11O94913 1555 aaKnown RBP8.34□□□□□ -1.07
ERVK-28-203ENST00000600419 TIAM1Q13009 1591 aa8.34□□□□□ -1.07
ERVK-28-203ENST00000600419 CEP170Q5SW79 1584 aa8.34□□□□□ -1.07
ERVK-28-203ENST00000600419 NUP160Q12769 1436 aa8.33□□□□□ -1.08
ERVK-28-203ENST00000600419 FHOD3Q2V2M9 1422 aa8.33□□□□□ -1.08
ERVK-28-203ENST00000600419 CASKIN1Q8WXD9 1431 aa8.33□□□□□ -1.08
ERVK-28-203ENST00000600419 KIAA0556O60303 1618 aa8.32□□□□□ -1.08
ERVK-28-203ENST00000600419 CARMIL2Q6F5E8 1435 aa8.32□□□□□ -1.08
ERVK-28-203ENST00000600419 HECW1Q76N89 1606 aa8.32□□□□□ -1.08
ERVK-28-203ENST00000600419 PPARGC1BQ86YN6 1023 aaKnown RBP8.31□□□□□ -1.08
ERVK-28-203ENST00000600419 P3H3Q8IVL6 736 aa8.31□□□□□ -1.08
ERVK-28-203ENST00000600419 CCDC18Q5T9S5 1454 aa8.31□□□□□ -1.08
ERVK-28-203ENST00000600419 ATP1B4Q9UN42 357 aaPredicted RBP8.28□□□□□ -1.08
ERVK-28-203ENST00000600419 LRRIQ1Q96JM4 1722 aa8.28□□□□□ -1.08
ERVK-28-203ENST00000600419 SUPT6HQ7KZ85 1726 aaKnown RBP8.27□□□□□ -1.09
ERVK-28-203ENST00000600419 RAPGEF6Q8TEU7 1601 aa8.27□□□□□ -1.09
ERVK-28-203ENST00000600419 DISP1Q96F81 1524 aa8.27□□□□□ -1.09
ERVK-28-203ENST00000600419 TTBK1Q5TCY1 1321 aaPredicted RBP8.27□□□□□ -1.09
ERVK-28-203ENST00000600419 LRRC9Q6ZRR7 1453 aa8.26□□□□□ -1.09
ERVK-28-203ENST00000600419 SHROOM2Q13796 1616 aa8.26□□□□□ -1.09
ERVK-28-203ENST00000600419 JPH4Q96JJ6 628 aa8.26□□□□□ -1.09
ERVK-28-203ENST00000600419 EHBP1L1Q8N3D4 1523 aa8.25□□□□□ -1.09
ERVK-28-203ENST00000600419 MTUS2Q5JR59 1369 aa8.24□□□□□ -1.09
ERVK-28-203ENST00000600419 CDK11AQ9UQ88 783 aaPredicted RBP8.22□□□□□ -1.09
ERVK-28-203ENST00000600419 EPRSP07814 1512 aaKnown RBP8.22□□□□□ -1.09
ERVK-28-203ENST00000600419 CLASP1Q7Z460 1538 aa8.22□□□□□ -1.09
ERVK-28-203ENST00000600419 PRG4Q92954 1404 aaPredicted RBP8.21□□□□□ -1.09
ERVK-28-203ENST00000600419 RRBP1Q9P2E9 1410 aaKnown RBP8.21□□□□□ -1.09
ERVK-28-203ENST00000600419 KANK4Q5T7N3 995 aaPredicted RBP8.21□□□□□ -1.1
ERVK-28-203ENST00000600419 ZEB1P37275 1124 aaPredicted RBP8.2□□□□□ -1.1
ERVK-28-203ENST00000600419 CCNB3Q8WWL7 1395 aa8.19□□□□□ -1.1
ERVK-28-203ENST00000600419 ABCA8O94911 1581 aa8.18□□□□□ -1.1
ERVK-28-203ENST00000600419 ITSN2Q9NZM3 1697 aa8.18□□□□□ -1.1
ERVK-28-203ENST00000600419 PTPRGP23470 1445 aa8.18□□□□□ -1.1
ERVK-28-203ENST00000600419 ADCY10Q96PN6 1610 aa8.18□□□□□ -1.1
ERVK-28-203ENST00000600419 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.17□□□□□ -1.1
ERVK-28-203ENST00000600419 NUP153P49790 1475 aaKnown RBP8.17□□□□□ -1.1
ERVK-28-203ENST00000600419 CDK13Q14004 1512 aaKnown RBP8.17□□□□□ -1.1
ERVK-28-203ENST00000600419 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.16□□□□□ -1.1
ERVK-28-203ENST00000600419 HRCP23327 699 aa8.16□□□□□ -1.1
ERVK-28-203ENST00000600419 NCOA2Q15596 1464 aa8.16□□□□□ -1.1
ERVK-28-203ENST00000600419 HNRNPUL2Q1KMD3 747 aaKnown RBP8.16□□□□□ -1.1
ERVK-28-203ENST00000600419 PLB1Q6P1J6 1458 aa8.15□□□□□ -1.1
ERVK-28-203ENST00000600419 KIF14Q15058 1648 aa8.14□□□□□ -1.11
ERVK-28-203ENST00000600419 PTPN23Q9H3S7 1636 aa8.14□□□□□ -1.11
ERVK-28-203ENST00000600419 MYOM3Q5VTT5 1437 aa8.14□□□□□ -1.11
ERVK-28-203ENST00000600419 OSCARQ8IYS5 282 aa8.14□□□□□ -1.11
ERVK-28-203ENST00000600419 ARHGEF11O15085 1522 aa8.13□□□□□ -1.11
ERVK-28-203ENST00000600419 ABCC2Q92887 1545 aa8.13□□□□□ -1.11
ERVK-28-203ENST00000600419 TROQ12816 1431 aaPredicted RBP8.13□□□□□ -1.11
ERVK-28-203ENST00000600419 FGD6Q6ZV73 1430 aa8.13□□□□□ -1.11
ERVK-28-203ENST00000600419 UACAQ9BZF9 1416 aa8.13□□□□□ -1.11
ERVK-28-203ENST00000600419 PHLDB1Q86UU1 1377 aa8.13□□□□□ -1.11
ERVK-28-203ENST00000600419 MAGI3Q5TCQ9 1506 aa8.13□□□□□ -1.11
ERVK-28-203ENST00000600419 MIA2Q96PC5 1412 aa8.12□□□□□ -1.11
ERVK-28-203ENST00000600419 PLEKHD1A6NEE1 506 aa8.12□□□□□ -1.11
ERVK-28-203ENST00000600419 FAM50AQ14320 339 aaKnown RBP8.12□□□□□ -1.11
ERVK-28-203ENST00000600419 CCER1Q8TC90 406 aaPredicted RBP8.12□□□□□ -1.11
ERVK-28-203ENST00000600419 CDC42BPAQ5VT25 1732 aa8.11□□□□□ -1.11
ERVK-28-203ENST00000600419 UHRF1BP1LA0JNW5 1464 aa8.11□□□□□ -1.11
ERVK-28-203ENST00000600419 ATP10BO94823 1461 aa8.1□□□□□ -1.11
ERVK-28-203ENST00000600419 ZCCHC11Q5TAX3 1644 aaKnown RBP8.1□□□□□ -1.11
ERVK-28-203ENST00000600419 ERCC6L2Q5T890 1561 aa8.1□□□□□ -1.11
ERVK-28-203ENST00000600419 MYO5CQ9NQX4 1742 aa8.09□□□□□ -1.11
ERVK-28-203ENST00000600419 TCOF1Q13428 1488 aaKnown RBP8.09□□□□□ -1.11
ERVK-28-203ENST00000600419 ARID3CA6NKF2 412 aa8.09□□□□□ -1.11
ERVK-28-203ENST00000600419 ACIN1Q9UKV3 1341 aaKnown RBP8.08□□□□□ -1.12
ERVK-28-203ENST00000600419 ITGAEP38570 1179 aa8.07□□□□□ -1.12
ERVK-28-203ENST00000600419 ADGBQ8N7X0 1667 aa8.07□□□□□ -1.12
ERVK-28-203ENST00000600419 GCC2Q8IWJ2 1684 aa8.06□□□□□ -1.12
ERVK-28-203ENST00000600419 KDM5BQ9UGL1 1544 aa8.06□□□□□ -1.12
ERVK-28-203ENST00000600419 DNMT1P26358 1616 aaKnown RBP8.06□□□□□ -1.12
ERVK-28-203ENST00000600419 PREX2Q70Z35 1606 aa8.06□□□□□ -1.12
ERVK-28-203ENST00000600419 CLSPNQ9HAW4 1339 aa8.05□□□□□ -1.12
ERVK-28-203ENST00000600419 CROCC2H7BZ55 1655 aa8.05□□□□□ -1.12
ERVK-28-203ENST00000600419 SETD5Q9C0A6 1442 aa8.05□□□□□ -1.12
ERVK-28-203ENST00000600419 CDC42BPBQ9Y5S2 1711 aa8.05□□□□□ -1.12
ERVK-28-203ENST00000600419 CFDP1Q9UEE9 299 aaPredicted RBP8.04□□□□□ -1.12
ERVK-28-203ENST00000600419 AKNAQ7Z591 1439 aa8.03□□□□□ -1.12
ERVK-28-203ENST00000600419 ABCC10Q5T3U5 1492 aa8.03□□□□□ -1.12
ERVK-28-203ENST00000600419 NPM1P06748 294 aaKnown RBP eCLIP8.03□□□□□ -1.12
ERVK-28-203ENST00000600419 GPATCH8Q9UKJ3 1502 aaKnown RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms