RNA–Protein interactions for RNA: ENST00000600380.1

FARP1-230, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-230ENST00000600380 JPH4Q96JJ6 628 aa19.57■□□□□ 0.72
FARP1-230ENST00000600380 ERCC6L2Q5T890 1561 aa19.56■□□□□ 0.72
FARP1-230ENST00000600380 ARHGEF11O15085 1522 aa19.56■□□□□ 0.72
FARP1-230ENST00000600380 KIF21BO75037 1637 aa19.55■□□□□ 0.72
FARP1-230ENST00000600380 SHROOM2Q13796 1616 aa19.54■□□□□ 0.72
FARP1-230ENST00000600380 RIMBP3CA6NJZ7 1639 aa19.53■□□□□ 0.72
FARP1-230ENST00000600380 RIMBP3BA6NNM3 1639 aa19.53■□□□□ 0.72
FARP1-230ENST00000600380 RIMBP3Q9UFD9 1639 aa19.53■□□□□ 0.72
FARP1-230ENST00000600380 PRG4Q92954 1404 aaPredicted RBP19.51■□□□□ 0.71
FARP1-230ENST00000600380 IQGAP2Q13576 1575 aa19.49■□□□□ 0.71
FARP1-230ENST00000600380 GOLGA3Q08378 1498 aa19.47■□□□□ 0.71
FARP1-230ENST00000600380 ARAP1Q96P48 1450 aa19.46■□□□□ 0.71
FARP1-230ENST00000600380 CTTNBP2Q8WZ74 1663 aa19.44■□□□□ 0.7
FARP1-230ENST00000600380 UBTFP17480 764 aaKnown RBP19.44■□□□□ 0.7
FARP1-230ENST00000600380 UGGT2Q9NYU1 1516 aa19.42■□□□□ 0.7
FARP1-230ENST00000600380 LOC105371045A0A1W2PR82 267 aa19.42■□□□□ 0.7
FARP1-230ENST00000600380 CYB5RLQ6IPT4 315 aa19.42■□□□□ 0.7
FARP1-230ENST00000600380 DISP1Q96F81 1524 aa19.41■□□□□ 0.7
FARP1-230ENST00000600380 RANGAP1P46060 587 aaPredicted RBP19.4■□□□□ 0.7
FARP1-230ENST00000600380 P3H3Q8IVL6 736 aa19.34■□□□□ 0.69
FARP1-230ENST00000600380 TTBK1Q5TCY1 1321 aaPredicted RBP19.33■□□□□ 0.69
FARP1-230ENST00000600380 CARMIL2Q6F5E8 1435 aa19.33■□□□□ 0.68
FARP1-230ENST00000600380 KIAA0556O60303 1618 aa19.31■□□□□ 0.68
FARP1-230ENST00000600380 TNIKQ9UKE5 1360 aa19.31■□□□□ 0.68
FARP1-230ENST00000600380 PTPRGP23470 1445 aa19.29■□□□□ 0.68
FARP1-230ENST00000600380 SAMD9Q5K651 1589 aa19.27■□□□□ 0.68
FARP1-230ENST00000600380 FHOD3Q2V2M9 1422 aa19.24■□□□□ 0.67
FARP1-230ENST00000600380 ARHGAP35Q9NRY4 1499 aa19.22■□□□□ 0.67
FARP1-230ENST00000600380 EFCAB5A4FU69 1503 aa19.18■□□□□ 0.66
FARP1-230ENST00000600380 PLB1Q6P1J6 1458 aa19.17■□□□□ 0.66
FARP1-230ENST00000600380 ADCY10Q96PN6 1610 aa19.17■□□□□ 0.66
FARP1-230ENST00000600380 CLIP1P30622 1438 aa19.17■□□□□ 0.66
FARP1-230ENST00000600380 UACAQ9BZF9 1416 aa19.16■□□□□ 0.66
FARP1-230ENST00000600380 CEP162Q5TB80 1403 aa19.14■□□□□ 0.65
FARP1-230ENST00000600380 ABCA8O94911 1581 aa19.13■□□□□ 0.65
FARP1-230ENST00000600380 UHRF1BP1LA0JNW5 1464 aa19.1■□□□□ 0.65
FARP1-230ENST00000600380 ABCC2Q92887 1545 aa19.1■□□□□ 0.65
FARP1-230ENST00000600380 ARID3CA6NKF2 412 aa19.08■□□□□ 0.64
FARP1-230ENST00000600380 KDM5BQ9UGL1 1544 aa19.03■□□□□ 0.64
FARP1-230ENST00000600380 RAPGEF6Q8TEU7 1601 aa19.03■□□□□ 0.64
FARP1-230ENST00000600380 NUP153P49790 1475 aaKnown RBP19.03■□□□□ 0.64
FARP1-230ENST00000600380 FMN1Q68DA7 1419 aa19.01■□□□□ 0.63
FARP1-230ENST00000600380 NPM1P06748 294 aaKnown RBP eCLIP19.01■□□□□ 0.63
FARP1-230ENST00000600380 ATP10BO94823 1461 aa19.01■□□□□ 0.63
FARP1-230ENST00000600380 ZCCHC11Q5TAX3 1644 aaKnown RBP18.98■□□□□ 0.63
FARP1-230ENST00000600380 ATP1B4Q9UN42 357 aaPredicted RBP18.96■□□□□ 0.63
FARP1-230ENST00000600380 ASXL2Q76L83 1435 aa18.95■□□□□ 0.62
FARP1-230ENST00000600380 MAPKBP1O60336 1514 aa18.95■□□□□ 0.62
FARP1-230ENST00000600380 PCF11O94913 1555 aaKnown RBP18.94■□□□□ 0.62
FARP1-230ENST00000600380 CASKIN1Q8WXD9 1431 aa18.94■□□□□ 0.62
FARP1-230ENST00000600380 CDK13Q14004 1512 aaKnown RBP18.93■□□□□ 0.62
FARP1-230ENST00000600380 LRRIQ1Q96JM4 1722 aa18.9■□□□□ 0.62
FARP1-230ENST00000600380 EPRSP07814 1512 aaKnown RBP18.9■□□□□ 0.62
FARP1-230ENST00000600380 TRHP20396 242 aaPredicted RBP18.89■□□□□ 0.61
FARP1-230ENST00000600380 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.88■□□□□ 0.61
FARP1-230ENST00000600380 HNRNPUL2Q1KMD3 747 aaKnown RBP18.88■□□□□ 0.61
FARP1-230ENST00000600380 HECW1Q76N89 1606 aa18.88■□□□□ 0.61
FARP1-230ENST00000600380 VPS8Q8N3P4 1428 aa18.87■□□□□ 0.61
FARP1-230ENST00000600380 FYCO1Q9BQS8 1478 aa18.87■□□□□ 0.61
FARP1-230ENST00000600380 ABCC10Q5T3U5 1492 aa18.86■□□□□ 0.61
FARP1-230ENST00000600380 WDR7Q9Y4E6 1490 aa18.85■□□□□ 0.61
FARP1-230ENST00000600380 FAM69CQ0P6D2 419 aa18.85■□□□□ 0.61
FARP1-230ENST00000600380 KCNH8Q96L42 1107 aa18.85■□□□□ 0.61
FARP1-230ENST00000600380 DIP2BQ9P265 1576 aa18.83■□□□□ 0.6
FARP1-230ENST00000600380 KIF13AQ9H1H9 1805 aa18.81■□□□□ 0.6
FARP1-230ENST00000600380 PLEKHD1A6NEE1 506 aa18.8■□□□□ 0.6
FARP1-230ENST00000600380 MAGI3Q5TCQ9 1506 aa18.79■□□□□ 0.6
FARP1-230ENST00000600380 CCDC18Q5T9S5 1454 aa18.77■□□□□ 0.59
FARP1-230ENST00000600380 GLI2P10070 1586 aa18.76■□□□□ 0.59
FARP1-230ENST00000600380 TROQ12816 1431 aaPredicted RBP18.74■□□□□ 0.59
FARP1-230ENST00000600380 CDK11AQ9UQ88 783 aaPredicted RBP18.72■□□□□ 0.59
FARP1-230ENST00000600380 KANK4Q5T7N3 995 aaPredicted RBP18.71■□□□□ 0.59
FARP1-230ENST00000600380 KIF14Q15058 1648 aa18.7■□□□□ 0.58
FARP1-230ENST00000600380 TIAM1Q13009 1591 aa18.68■□□□□ 0.58
FARP1-230ENST00000600380 MAP3K4Q9Y6R4 1608 aa18.68■□□□□ 0.58
FARP1-230ENST00000600380 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.68■□□□□ 0.58
FARP1-230ENST00000600380 CD109Q6YHK3 1445 aa18.67■□□□□ 0.58
FARP1-230ENST00000600380 TSPOAP1O95153 1857 aa18.67■□□□□ 0.58
FARP1-230ENST00000600380 ABCA9Q8IUA7 1624 aa18.67■□□□□ 0.58
FARP1-230ENST00000600380 PPRC1Q5VV67 1664 aaKnown RBP18.66■□□□□ 0.58
FARP1-230ENST00000600380 CFAP43Q8NDM7 1665 aa18.66■□□□□ 0.58
FARP1-230ENST00000600380 TTC37Q6PGP7 1564 aa18.66■□□□□ 0.58
FARP1-230ENST00000600380 MTUS2Q5JR59 1369 aa18.65■□□□□ 0.58
FARP1-230ENST00000600380 MAP3K1Q13233 1512 aa18.64■□□□□ 0.57
FARP1-230ENST00000600380 LRRC9Q6ZRR7 1453 aa18.63■□□□□ 0.57
FARP1-230ENST00000600380 EHBP1L1Q8N3D4 1523 aa18.59■□□□□ 0.57
FARP1-230ENST00000600380 APLP2Q06481 763 aa18.57■□□□□ 0.56
FARP1-230ENST00000600380 PPARGC1BQ86YN6 1023 aaKnown RBP18.57■□□□□ 0.56
FARP1-230ENST00000600380 PLCH2O75038 1416 aa18.57■□□□□ 0.56
FARP1-230ENST00000600380 COL17A1Q9UMD9 1497 aaPredicted RBP18.56■□□□□ 0.56
FARP1-230ENST00000600380 NCOA2Q15596 1464 aa18.55■□□□□ 0.56
FARP1-230ENST00000600380 GPATCH8Q9UKJ3 1502 aaKnown RBP18.54■□□□□ 0.56
FARP1-230ENST00000600380 TEX14Q8IWB6 1497 aa18.52■□□□□ 0.56
FARP1-230ENST00000600380 CCNB3Q8WWL7 1395 aa18.51■□□□□ 0.55
FARP1-230ENST00000600380 FANCAO15360 1455 aa18.51■□□□□ 0.55
FARP1-230ENST00000600380 CDC42BPAQ5VT25 1732 aa18.5■□□□□ 0.55
FARP1-230ENST00000600380 MYO5CQ9NQX4 1742 aa18.5■□□□□ 0.55
FARP1-230ENST00000600380 SUPT6HQ7KZ85 1726 aaKnown RBP18.49■□□□□ 0.55
FARP1-230ENST00000600380 CDC42BPBQ9Y5S2 1711 aa18.49■□□□□ 0.55
FARP1-230ENST00000600380 EFCAB2Q5VUJ9 269 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms