RNA–Protein interactions for RNA: ENST00000600006.5

CHMP2A-205, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-205ENST00000600006 KIAA0586Q9BVV6 1533 aa13.65□□□□□ -0.22
CHMP2A-205ENST00000600006 PRG4Q92954 1404 aaPredicted RBP13.62□□□□□ -0.23
CHMP2A-205ENST00000600006 RAPGEF2Q9Y4G8 1499 aa13.6□□□□□ -0.23
CHMP2A-205ENST00000600006 IQGAP2Q13576 1575 aa13.59□□□□□ -0.23
CHMP2A-205ENST00000600006 JPH4Q96JJ6 628 aa13.59□□□□□ -0.23
CHMP2A-205ENST00000600006 CTTNBP2Q8WZ74 1663 aa13.56□□□□□ -0.24
CHMP2A-205ENST00000600006 PRXQ9BXM0 1461 aa13.55□□□□□ -0.24
CHMP2A-205ENST00000600006 UGGT2Q9NYU1 1516 aa13.52□□□□□ -0.25
CHMP2A-205ENST00000600006 EEA1Q15075 1411 aa13.51□□□□□ -0.25
CHMP2A-205ENST00000600006 ADCY10Q96PN6 1610 aa13.5□□□□□ -0.25
CHMP2A-205ENST00000600006 DISP1Q96F81 1524 aa13.49□□□□□ -0.25
CHMP2A-205ENST00000600006 CARMIL2Q6F5E8 1435 aa13.48□□□□□ -0.25
CHMP2A-205ENST00000600006 KIAA0556O60303 1618 aa13.48□□□□□ -0.25
CHMP2A-205ENST00000600006 TNIKQ9UKE5 1360 aa13.45□□□□□ -0.26
CHMP2A-205ENST00000600006 MAPKBP1O60336 1514 aa13.44□□□□□ -0.26
CHMP2A-205ENST00000600006 TRHP20396 242 aaPredicted RBP13.43□□□□□ -0.26
CHMP2A-205ENST00000600006 PTPRGP23470 1445 aa13.43□□□□□ -0.26
CHMP2A-205ENST00000600006 CSRNP3Q8WYN3 585 aa13.43□□□□□ -0.26
CHMP2A-205ENST00000600006 KIF21BO75037 1637 aa13.42□□□□□ -0.26
CHMP2A-205ENST00000600006 KIF13AQ9H1H9 1805 aa13.42□□□□□ -0.26
CHMP2A-205ENST00000600006 CHIC1Q5VXU3 224 aa13.41□□□□□ -0.26
CHMP2A-205ENST00000600006 UHRF1BP1LA0JNW5 1464 aa13.4□□□□□ -0.26
CHMP2A-205ENST00000600006 GOLGA3Q08378 1498 aa13.4□□□□□ -0.26
CHMP2A-205ENST00000600006 ABCC2Q92887 1545 aa13.39□□□□□ -0.27
CHMP2A-205ENST00000600006 SAMD9Q5K651 1589 aa13.37□□□□□ -0.27
CHMP2A-205ENST00000600006 DIP2BQ9P265 1576 aa13.37□□□□□ -0.27
CHMP2A-205ENST00000600006 UACAQ9BZF9 1416 aa13.36□□□□□ -0.27
CHMP2A-205ENST00000600006 ABCC10Q5T3U5 1492 aa13.35□□□□□ -0.27
CHMP2A-205ENST00000600006 ABCA8O94911 1581 aa13.33□□□□□ -0.28
CHMP2A-205ENST00000600006 NPM1P06748 294 aaKnown RBP eCLIP13.33□□□□□ -0.28
CHMP2A-205ENST00000600006 KDM5BQ9UGL1 1544 aa13.33□□□□□ -0.28
CHMP2A-205ENST00000600006 ZCCHC11Q5TAX3 1644 aaKnown RBP13.32□□□□□ -0.28
CHMP2A-205ENST00000600006 FAM9AQ8IZU1 332 aaPredicted RBP13.32□□□□□ -0.28
CHMP2A-205ENST00000600006 TTBK1Q5TCY1 1321 aaPredicted RBP13.32□□□□□ -0.28
CHMP2A-205ENST00000600006 PLB1Q6P1J6 1458 aa13.29□□□□□ -0.28
CHMP2A-205ENST00000600006 EFCAB5A4FU69 1503 aa13.28□□□□□ -0.28
CHMP2A-205ENST00000600006 ASXL2Q76L83 1435 aa13.27□□□□□ -0.29
CHMP2A-205ENST00000600006 GLI2P10070 1586 aa13.27□□□□□ -0.29
CHMP2A-205ENST00000600006 RAPGEF6Q8TEU7 1601 aa13.24□□□□□ -0.29
CHMP2A-205ENST00000600006 FAM69CQ0P6D2 419 aa13.23□□□□□ -0.29
CHMP2A-205ENST00000600006 PPRC1Q5VV67 1664 aaKnown RBP13.22□□□□□ -0.29
CHMP2A-205ENST00000600006 TSPOAP1O95153 1857 aa13.22□□□□□ -0.29
CHMP2A-205ENST00000600006 EPRSP07814 1512 aaKnown RBP13.22□□□□□ -0.29
CHMP2A-205ENST00000600006 MAP3K4Q9Y6R4 1608 aa13.21□□□□□ -0.29
CHMP2A-205ENST00000600006 WDR7Q9Y4E6 1490 aa13.21□□□□□ -0.3
CHMP2A-205ENST00000600006 FHOD3Q2V2M9 1422 aa13.21□□□□□ -0.3
CHMP2A-205ENST00000600006 P3H3Q8IVL6 736 aa13.2□□□□□ -0.3
CHMP2A-205ENST00000600006 CFAP43Q8NDM7 1665 aa13.17□□□□□ -0.3
CHMP2A-205ENST00000600006 KDM6BO15054 1643 aa13.17□□□□□ -0.3
CHMP2A-205ENST00000600006 ATP10BO94823 1461 aa13.16□□□□□ -0.3
CHMP2A-205ENST00000600006 NUP153P49790 1475 aaKnown RBP13.16□□□□□ -0.3
CHMP2A-205ENST00000600006 ARHGAP35Q9NRY4 1499 aa13.16□□□□□ -0.3
CHMP2A-205ENST00000600006 UBTFP17480 764 aaKnown RBP13.15□□□□□ -0.3
CHMP2A-205ENST00000600006 RANGAP1P46060 587 aaPredicted RBP13.14□□□□□ -0.31
CHMP2A-205ENST00000600006 EHMT2Q96KQ7 1210 aa13.12□□□□□ -0.31
CHMP2A-205ENST00000600006 TEX14Q8IWB6 1497 aa13.11□□□□□ -0.31
CHMP2A-205ENST00000600006 HECW1Q76N89 1606 aa13.11□□□□□ -0.31
CHMP2A-205ENST00000600006 ABCA9Q8IUA7 1624 aa13.11□□□□□ -0.31
CHMP2A-205ENST00000600006 MAGI3Q5TCQ9 1506 aa13.1□□□□□ -0.31
CHMP2A-205ENST00000600006 FMN1Q68DA7 1419 aa13.1□□□□□ -0.31
CHMP2A-205ENST00000600006 ARID3CA6NKF2 412 aa13.08□□□□□ -0.32
CHMP2A-205ENST00000600006 LRRIQ1Q96JM4 1722 aa13.06□□□□□ -0.32
CHMP2A-205ENST00000600006 CDK13Q14004 1512 aaKnown RBP13.06□□□□□ -0.32
CHMP2A-205ENST00000600006 CD109Q6YHK3 1445 aa13.05□□□□□ -0.32
CHMP2A-205ENST00000600006 PCF11O94913 1555 aaKnown RBP13.04□□□□□ -0.32
CHMP2A-205ENST00000600006 KCNH8Q96L42 1107 aa13.03□□□□□ -0.32
CHMP2A-205ENST00000600006 COL17A1Q9UMD9 1497 aaPredicted RBP13.03□□□□□ -0.32
CHMP2A-205ENST00000600006 CLIP1P30622 1438 aa13.02□□□□□ -0.33
CHMP2A-205ENST00000600006 TTC37Q6PGP7 1564 aa13□□□□□ -0.33
CHMP2A-205ENST00000600006 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13□□□□□ -0.33
CHMP2A-205ENST00000600006 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13□□□□□ -0.33
CHMP2A-205ENST00000600006 HNRNPUL2Q1KMD3 747 aaKnown RBP13□□□□□ -0.33
CHMP2A-205ENST00000600006 CASKIN1Q8WXD9 1431 aa12.99□□□□□ -0.33
CHMP2A-205ENST00000600006 FYCO1Q9BQS8 1478 aa12.98□□□□□ -0.33
CHMP2A-205ENST00000600006 PLEKHD1A6NEE1 506 aa12.98□□□□□ -0.33
CHMP2A-205ENST00000600006 CFAP74Q9C0B2 1584 aa12.98□□□□□ -0.33
CHMP2A-205ENST00000600006 ARAP3Q8WWN8 1544 aa12.98□□□□□ -0.33
CHMP2A-205ENST00000600006 NEO1Q92859 1461 aa12.97□□□□□ -0.33
CHMP2A-205ENST00000600006 CCDC18Q5T9S5 1454 aa12.97□□□□□ -0.33
CHMP2A-205ENST00000600006 KIF14Q15058 1648 aa12.96□□□□□ -0.33
CHMP2A-205ENST00000600006 MYO5CQ9NQX4 1742 aa12.96□□□□□ -0.34
CHMP2A-205ENST00000600006 PHLDB1Q86UU1 1377 aa12.95□□□□□ -0.34
CHMP2A-205ENST00000600006 CEP162Q5TB80 1403 aa12.95□□□□□ -0.34
CHMP2A-205ENST00000600006 TROQ12816 1431 aaPredicted RBP12.94□□□□□ -0.34
CHMP2A-205ENST00000600006 FRMPD1Q5SYB0 1578 aa12.94□□□□□ -0.34
CHMP2A-205ENST00000600006 RICTORQ6R327 1708 aa12.92□□□□□ -0.34
CHMP2A-205ENST00000600006 ATP1B4Q9UN42 357 aaPredicted RBP12.92□□□□□ -0.34
CHMP2A-205ENST00000600006 FANCAO15360 1455 aa12.91□□□□□ -0.34
CHMP2A-205ENST00000600006 CDK11AQ9UQ88 783 aaPredicted RBP12.91□□□□□ -0.34
CHMP2A-205ENST00000600006 PLCH2O75038 1416 aa12.88□□□□□ -0.35
CHMP2A-205ENST00000600006 PREX2Q70Z35 1606 aa12.88□□□□□ -0.35
CHMP2A-205ENST00000600006 AKNAQ7Z591 1439 aa12.88□□□□□ -0.35
CHMP2A-205ENST00000600006 CDC42BPBQ9Y5S2 1711 aa12.87□□□□□ -0.35
CHMP2A-205ENST00000600006 ZMYM4Q5VZL5 1548 aa12.87□□□□□ -0.35
CHMP2A-205ENST00000600006 DENND4BO75064 1496 aaPredicted RBP12.86□□□□□ -0.35
CHMP2A-205ENST00000600006 CDC42BPAQ5VT25 1732 aa12.86□□□□□ -0.35
CHMP2A-205ENST00000600006 ARHGEF40Q8TER5 1519 aa12.85□□□□□ -0.35
CHMP2A-205ENST00000600006 ADGRL1O94910 1474 aa12.85□□□□□ -0.35
CHMP2A-205ENST00000600006 ARHGAP5Q13017 1502 aa12.83□□□□□ -0.35
CHMP2A-205ENST00000600006 EHBP1L1Q8N3D4 1523 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms