RNA–Protein interactions for RNA: ENST00000599023.5

CPT1C-221, Transcript of carnitine palmitoyltransferase 1C, humanhuman

TSL 2

Gene CPT1C, Length 2,518 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1C-221ENST00000599023 CUL7Q14999 1698 aa21.66■■□□□ 1.06
CPT1C-221ENST00000599023 ARAP1Q96P48 1450 aa21.63■■□□□ 1.05
CPT1C-221ENST00000599023 ARHGAP35Q9NRY4 1499 aa21.59■■□□□ 1.05
CPT1C-221ENST00000599023 AQRO60306 1485 aaKnown RBP eCLIP21.59■■□□□ 1.05
CPT1C-221ENST00000599023 IFT140Q96RY7 1462 aa21.58■■□□□ 1.05
CPT1C-221ENST00000599023 THOC2Q8NI27 1593 aaKnown RBP21.57■■□□□ 1.04
CPT1C-221ENST00000599023 ZNF608Q9ULD9 1512 aaPredicted RBP21.53■■□□□ 1.04
CPT1C-221ENST00000599023 APLP2Q06481 763 aa21.52■■□□□ 1.03
CPT1C-221ENST00000599023 PBRM1Q86U86 1689 aa21.5■■□□□ 1.03
CPT1C-221ENST00000599023 GRIN2BQ13224 1484 aa21.48■■□□□ 1.03
CPT1C-221ENST00000599023 FHAD1B1AJZ9 1412 aa21.46■■□□□ 1.03
CPT1C-221ENST00000599023 PRKCSHP14314 528 aaPredicted RBP21.45■■□□□ 1.02
CPT1C-221ENST00000599023 CTTNBP2Q8WZ74 1663 aa21.44■■□□□ 1.02
CPT1C-221ENST00000599023 P3H3Q8IVL6 736 aa21.43■■□□□ 1.02
CPT1C-221ENST00000599023 ADAMTS12P58397 1594 aa21.42■■□□□ 1.02
CPT1C-221ENST00000599023 EIF4G3O43432 1585 aaKnown RBP21.4■■□□□ 1.02
CPT1C-221ENST00000599023 EFCAB5A4FU69 1503 aa21.36■■□□□ 1.01
CPT1C-221ENST00000599023 SNAPC4Q5SXM2 1469 aa21.35■■□□□ 1.01
CPT1C-221ENST00000599023 FHOD3Q2V2M9 1422 aa21.35■■□□□ 1.01
CPT1C-221ENST00000599023 KANK4Q5T7N3 995 aaPredicted RBP21.34■■□□□ 1.01
CPT1C-221ENST00000599023 DIEXFQ68CQ4 756 aaKnown RBP21.32■■□□□ 1
CPT1C-221ENST00000599023 ANP32EQ9BTT0 268 aa21.32■■□□□ 1
CPT1C-221ENST00000599023 SAMD9Q5K651 1589 aa21.26■□□□□ 0.99
CPT1C-221ENST00000599023 MAGI1Q96QZ7 1491 aaPredicted RBP21.25■□□□□ 0.99
CPT1C-221ENST00000599023 PCF11O94913 1555 aaKnown RBP21.24■□□□□ 0.99
CPT1C-221ENST00000599023 GRIN2AQ12879 1464 aa21.23■□□□□ 0.99
CPT1C-221ENST00000599023 IQGAP2Q13576 1575 aa21.23■□□□□ 0.99
CPT1C-221ENST00000599023 ATP1B4Q9UN42 357 aaPredicted RBP21.23■□□□□ 0.99
CPT1C-221ENST00000599023 MAP3K1Q13233 1512 aa21.21■□□□□ 0.99
CPT1C-221ENST00000599023 FMN1Q68DA7 1419 aa21.21■□□□□ 0.99
CPT1C-221ENST00000599023 TIAM1Q13009 1591 aa21.21■□□□□ 0.99
CPT1C-221ENST00000599023 CHMP7Q8WUX9 453 aaPredicted RBP21.21■□□□□ 0.99
CPT1C-221ENST00000599023 CASKIN1Q8WXD9 1431 aa21.2■□□□□ 0.98
CPT1C-221ENST00000599023 SYNJ2O15056 1496 aa21.2■□□□□ 0.98
CPT1C-221ENST00000599023 FYCO1Q9BQS8 1478 aa21.19■□□□□ 0.98
CPT1C-221ENST00000599023 FBLN2P98095 1184 aa21.17■□□□□ 0.98
CPT1C-221ENST00000599023 KIAA0586Q9BVV6 1533 aa21.17■□□□□ 0.98
CPT1C-221ENST00000599023 LRRC9Q6ZRR7 1453 aa21.14■□□□□ 0.97
CPT1C-221ENST00000599023 HNRNPUL2Q1KMD3 747 aaKnown RBP21.13■□□□□ 0.97
CPT1C-221ENST00000599023 UGGT2Q9NYU1 1516 aa21.13■□□□□ 0.97
CPT1C-221ENST00000599023 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.12■□□□□ 0.97
CPT1C-221ENST00000599023 CFAP43Q8NDM7 1665 aa21.11■□□□□ 0.97
CPT1C-221ENST00000599023 CEP170Q5SW79 1584 aa21.1■□□□□ 0.97
CPT1C-221ENST00000599023 ERICH6Q7L0X2 663 aa21.08■□□□□ 0.96
CPT1C-221ENST00000599023 RRBP1Q9P2E9 1410 aaKnown RBP21.07■□□□□ 0.96
CPT1C-221ENST00000599023 NUP160Q12769 1436 aa21.05■□□□□ 0.96
CPT1C-221ENST00000599023 DISP1Q96F81 1524 aa21.05■□□□□ 0.96
CPT1C-221ENST00000599023 CCER1Q8TC90 406 aaPredicted RBP21.04■□□□□ 0.96
CPT1C-221ENST00000599023 KIAA0556O60303 1618 aa21.02■□□□□ 0.96
CPT1C-221ENST00000599023 CCNB3Q8WWL7 1395 aa21.01■□□□□ 0.95
CPT1C-221ENST00000599023 PHLDB1Q86UU1 1377 aa21■□□□□ 0.95
CPT1C-221ENST00000599023 LRRIQ1Q96JM4 1722 aa20.99■□□□□ 0.95
CPT1C-221ENST00000599023 JPH4Q96JJ6 628 aa20.98■□□□□ 0.95
CPT1C-221ENST00000599023 MTUS2Q5JR59 1369 aa20.96■□□□□ 0.95
CPT1C-221ENST00000599023 HECW1Q76N89 1606 aa20.94■□□□□ 0.94
CPT1C-221ENST00000599023 CCDC18Q5T9S5 1454 aa20.93■□□□□ 0.94
CPT1C-221ENST00000599023 EPRSP07814 1512 aaKnown RBP20.91■□□□□ 0.94
CPT1C-221ENST00000599023 CARMIL2Q6F5E8 1435 aa20.9■□□□□ 0.94
CPT1C-221ENST00000599023 YTHDC1Q96MU7 727 aaKnown RBP20.89■□□□□ 0.93
CPT1C-221ENST00000599023 CLSPNQ9HAW4 1339 aa20.89■□□□□ 0.93
CPT1C-221ENST00000599023 ARID3CA6NKF2 412 aa20.88■□□□□ 0.93
CPT1C-221ENST00000599023 ITGAEP38570 1179 aa20.88■□□□□ 0.93
CPT1C-221ENST00000599023 CHD1O14646 1710 aa20.87■□□□□ 0.93
CPT1C-221ENST00000599023 TSHZ2Q9NRE2 1034 aa20.87■□□□□ 0.93
CPT1C-221ENST00000599023 CDK13Q14004 1512 aaKnown RBP20.87■□□□□ 0.93
CPT1C-221ENST00000599023 MAGI3Q5TCQ9 1506 aa20.87■□□□□ 0.93
CPT1C-221ENST00000599023 EHBP1L1Q8N3D4 1523 aa20.86■□□□□ 0.93
CPT1C-221ENST00000599023 FAM50AQ14320 339 aaKnown RBP20.85■□□□□ 0.93
CPT1C-221ENST00000599023 NCOA2Q15596 1464 aa20.84■□□□□ 0.93
CPT1C-221ENST00000599023 RAPGEF6Q8TEU7 1601 aa20.84■□□□□ 0.93
CPT1C-221ENST00000599023 NUP153P49790 1475 aaKnown RBP20.83■□□□□ 0.92
CPT1C-221ENST00000599023 PLB1Q6P1J6 1458 aa20.81■□□□□ 0.92
CPT1C-221ENST00000599023 SUPT6HQ7KZ85 1726 aaKnown RBP20.8■□□□□ 0.92
CPT1C-221ENST00000599023 PRG4Q92954 1404 aaPredicted RBP20.8■□□□□ 0.92
CPT1C-221ENST00000599023 FGD6Q6ZV73 1430 aa20.8■□□□□ 0.92
CPT1C-221ENST00000599023 ZNF316A6NFI3 1004 aaPredicted RBP20.78■□□□□ 0.92
CPT1C-221ENST00000599023 ARHGEF11O15085 1522 aa20.77■□□□□ 0.91
CPT1C-221ENST00000599023 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.77■□□□□ 0.91
CPT1C-221ENST00000599023 MYOM3Q5VTT5 1437 aa20.76■□□□□ 0.91
CPT1C-221ENST00000599023 SUPT16HQ9Y5B9 1047 aaKnown RBP20.75■□□□□ 0.91
CPT1C-221ENST00000599023 CDK11AQ9UQ88 783 aaPredicted RBP20.71■□□□□ 0.91
CPT1C-221ENST00000599023 SHROOM2Q13796 1616 aa20.7■□□□□ 0.9
CPT1C-221ENST00000599023 ABCA8O94911 1581 aa20.7■□□□□ 0.9
CPT1C-221ENST00000599023 PTPRGP23470 1445 aa20.69■□□□□ 0.9
CPT1C-221ENST00000599023 MIER1Q8N108 512 aa20.67■□□□□ 0.9
CPT1C-221ENST00000599023 DHX57Q6P158 1386 aaKnown RBP20.67■□□□□ 0.9
CPT1C-221ENST00000599023 RAB3GAP2Q9H2M9 1393 aa20.67■□□□□ 0.9
CPT1C-221ENST00000599023 SETD5Q9C0A6 1442 aa20.66■□□□□ 0.9
CPT1C-221ENST00000599023 PTPN23Q9H3S7 1636 aa20.65■□□□□ 0.9
CPT1C-221ENST00000599023 CLASP1Q7Z460 1538 aa20.64■□□□□ 0.9
CPT1C-221ENST00000599023 TROQ12816 1431 aaPredicted RBP20.63■□□□□ 0.89
CPT1C-221ENST00000599023 ERCC6L2Q5T890 1561 aa20.63■□□□□ 0.89
CPT1C-221ENST00000599023 ATP10BO94823 1461 aa20.62■□□□□ 0.89
CPT1C-221ENST00000599023 PTPRKQ15262 1439 aa20.62■□□□□ 0.89
CPT1C-221ENST00000599023 TCOF1Q13428 1488 aaKnown RBP20.61■□□□□ 0.89
CPT1C-221ENST00000599023 MIA2Q96PC5 1412 aa20.61■□□□□ 0.89
CPT1C-221ENST00000599023 PLEKHD1A6NEE1 506 aa20.57■□□□□ 0.88
CPT1C-221ENST00000599023 UACAQ9BZF9 1416 aa20.57■□□□□ 0.88
CPT1C-221ENST00000599023 KIF14Q15058 1648 aa20.53■□□□□ 0.88
CPT1C-221ENST00000599023 ADCY10Q96PN6 1610 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms