RNA–Protein interactions for RNA: ENST00000598772.1

HERC3-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-213ENST00000598772 DCAF8L1A6NGE4 600 aa8.64□□□□□ -1.03
HERC3-213ENST00000598772 TARBP1Q13395 1621 aaKnown RBP8.64□□□□□ -1.03
HERC3-213ENST00000598772 ABCC8Q09428 1581 aa8.64□□□□□ -1.03
HERC3-213ENST00000598772 C1QBPQ07021 282 aaKnown RBP8.63□□□□□ -1.03
HERC3-213ENST00000598772 ABCC10Q5T3U5 1492 aa8.62□□□□□ -1.03
HERC3-213ENST00000598772 DNMBPQ6XZF7 1577 aa8.6□□□□□ -1.03
HERC3-213ENST00000598772 POLA1P09884 1462 aaPredicted RBP8.59□□□□□ -1.03
HERC3-213ENST00000598772 MAGI1Q96QZ7 1491 aaPredicted RBP8.59□□□□□ -1.03
HERC3-213ENST00000598772 CERKQ8TCT0 537 aa8.58□□□□□ -1.04
HERC3-213ENST00000598772 GRIN2BQ13224 1484 aa8.57□□□□□ -1.04
HERC3-213ENST00000598772 TTBK1Q5TCY1 1321 aaPredicted RBP8.54□□□□□ -1.04
HERC3-213ENST00000598772 CEP170Q5SW79 1584 aa8.53□□□□□ -1.04
HERC3-213ENST00000598772 DIP2BQ9P265 1576 aa8.53□□□□□ -1.04
HERC3-213ENST00000598772 PRDM2Q13029 1718 aa8.53□□□□□ -1.04
HERC3-213ENST00000598772 SPATA31D1Q6ZQQ2 1576 aa8.52□□□□□ -1.05
HERC3-213ENST00000598772 PRG4Q92954 1404 aaPredicted RBP8.51□□□□□ -1.05
HERC3-213ENST00000598772 JPH4Q96JJ6 628 aa8.5□□□□□ -1.05
HERC3-213ENST00000598772 HSPA2P54652 639 aa8.48□□□□□ -1.05
HERC3-213ENST00000598772 CCDC88BA6NC98 1476 aa8.48□□□□□ -1.05
HERC3-213ENST00000598772 FGD5Q6ZNL6 1462 aa8.47□□□□□ -1.05
HERC3-213ENST00000598772 TOP2AP11388 1531 aaKnown RBP8.47□□□□□ -1.05
HERC3-213ENST00000598772 MAPKBP1O60336 1514 aa8.46□□□□□ -1.05
HERC3-213ENST00000598772 TOP2BQ02880 1626 aa8.46□□□□□ -1.06
HERC3-213ENST00000598772 COL17A1Q9UMD9 1497 aaPredicted RBP8.45□□□□□ -1.06
HERC3-213ENST00000598772 GRIN2AQ12879 1464 aa8.44□□□□□ -1.06
HERC3-213ENST00000598772 PBRM1Q86U86 1689 aa8.42□□□□□ -1.06
HERC3-213ENST00000598772 WDR97A6NE52 1622 aa8.41□□□□□ -1.06
HERC3-213ENST00000598772 NUP160Q12769 1436 aa8.4□□□□□ -1.06
HERC3-213ENST00000598772 ADCY10Q96PN6 1610 aa8.4□□□□□ -1.07
HERC3-213ENST00000598772 ARID4BQ4LE39 1312 aaPredicted RBP8.39□□□□□ -1.07
HERC3-213ENST00000598772 SHROOM2Q13796 1616 aa8.37□□□□□ -1.07
HERC3-213ENST00000598772 SCAF1Q9H7N4 1312 aaKnown RBP8.37□□□□□ -1.07
HERC3-213ENST00000598772 PTPRMP28827 1452 aa8.37□□□□□ -1.07
HERC3-213ENST00000598772 ASXL2Q76L83 1435 aa8.35□□□□□ -1.07
HERC3-213ENST00000598772 PCF11O94913 1555 aaKnown RBP8.34□□□□□ -1.07
HERC3-213ENST00000598772 PPRC1Q5VV67 1664 aaKnown RBP8.34□□□□□ -1.08
HERC3-213ENST00000598772 CUX1P39880 1505 aa8.33□□□□□ -1.08
HERC3-213ENST00000598772 TEX14Q8IWB6 1497 aa8.32□□□□□ -1.08
HERC3-213ENST00000598772 FHAD1B1AJZ9 1412 aa8.32□□□□□ -1.08
HERC3-213ENST00000598772 PLB1Q6P1J6 1458 aa8.32□□□□□ -1.08
HERC3-213ENST00000598772 KCNH8Q96L42 1107 aa8.31□□□□□ -1.08
HERC3-213ENST00000598772 PTPRGP23470 1445 aa8.3□□□□□ -1.08
HERC3-213ENST00000598772 KIF21BO75037 1637 aa8.3□□□□□ -1.08
HERC3-213ENST00000598772 ADAMTS12P58397 1594 aa8.29□□□□□ -1.08
HERC3-213ENST00000598772 GLI2P10070 1586 aa8.27□□□□□ -1.09
HERC3-213ENST00000598772 UBAP1LF5GYI3 381 aa8.27□□□□□ -1.09
HERC3-213ENST00000598772 ABCA5Q8WWZ7 1642 aa8.27□□□□□ -1.09
HERC3-213ENST00000598772 ABCA10Q8WWZ4 1543 aa8.27□□□□□ -1.09
HERC3-213ENST00000598772 EPRSP07814 1512 aaKnown RBP8.24□□□□□ -1.09
HERC3-213ENST00000598772 ABCC2Q92887 1545 aa8.24□□□□□ -1.09
HERC3-213ENST00000598772 MLECQ14165 292 aa8.23□□□□□ -1.09
HERC3-213ENST00000598772 CD109Q6YHK3 1445 aa8.21□□□□□ -1.09
HERC3-213ENST00000598772 ADAMTSL3P82987 1691 aa8.21□□□□□ -1.09
HERC3-213ENST00000598772 RAPGEF3O95398 923 aa8.21□□□□□ -1.1
HERC3-213ENST00000598772 HOXD11P31277 338 aaPredicted RBP8.21□□□□□ -1.1
HERC3-213ENST00000598772 MAP3K4Q9Y6R4 1608 aa8.21□□□□□ -1.1
HERC3-213ENST00000598772 CUL7Q14999 1698 aa8.21□□□□□ -1.1
HERC3-213ENST00000598772 PIP4K2BP78356 416 aa8.2□□□□□ -1.1
HERC3-213ENST00000598772 MADDQ8WXG6 1647 aa8.2□□□□□ -1.1
HERC3-213ENST00000598772 HSPA1LP34931 641 aa8.19□□□□□ -1.1
HERC3-213ENST00000598772 WRNQ14191 1432 aaPredicted RBP eCLIP8.19□□□□□ -1.1
HERC3-213ENST00000598772 RIMS1Q86UR5 1692 aaKnown RBP8.18□□□□□ -1.1
HERC3-213ENST00000598772 TNIKQ9UKE5 1360 aa8.18□□□□□ -1.1
HERC3-213ENST00000598772 YEATS2Q9ULM3 1422 aa8.17□□□□□ -1.1
HERC3-213ENST00000598772 RUSC2Q8N2Y8 1516 aa8.17□□□□□ -1.1
HERC3-213ENST00000598772 KIAA0586Q9BVV6 1533 aa8.17□□□□□ -1.1
HERC3-213ENST00000598772 CEBPAP49715 358 aaPredicted RBP8.16□□□□□ -1.1
HERC3-213ENST00000598772 SP7Q8TDD2 431 aaPredicted RBP8.16□□□□□ -1.1
HERC3-213ENST00000598772 UACAQ9BZF9 1416 aa8.16□□□□□ -1.1
HERC3-213ENST00000598772 CARMIL2Q6F5E8 1435 aa8.15□□□□□ -1.1
HERC3-213ENST00000598772 MED1Q15648 1581 aaPredicted RBP8.14□□□□□ -1.11
HERC3-213ENST00000598772 ERICH3Q5RHP9 1530 aa8.14□□□□□ -1.11
HERC3-213ENST00000598772 BCORL1Q5H9F3 1711 aa8.14□□□□□ -1.11
HERC3-213ENST00000598772 ARID3CA6NKF2 412 aa8.12□□□□□ -1.11
HERC3-213ENST00000598772 MAGI3Q5TCQ9 1506 aa8.11□□□□□ -1.11
HERC3-213ENST00000598772 UHRF1BP1LA0JNW5 1464 aa8.1□□□□□ -1.11
HERC3-213ENST00000598772 WDR7Q9Y4E6 1490 aa8.1□□□□□ -1.11
HERC3-213ENST00000598772 ZCCHC11Q5TAX3 1644 aaKnown RBP8.09□□□□□ -1.11
HERC3-213ENST00000598772 POGZQ7Z3K3 1410 aa8.09□□□□□ -1.11
HERC3-213ENST00000598772 KDM5BQ9UGL1 1544 aa8.08□□□□□ -1.12
HERC3-213ENST00000598772 STRCQ7RTU9 1775 aa8.07□□□□□ -1.12
HERC3-213ENST00000598772 ZNF335Q9H4Z2 1342 aaPredicted RBP8.07□□□□□ -1.12
HERC3-213ENST00000598772 ARAP3Q8WWN8 1544 aa8.07□□□□□ -1.12
HERC3-213ENST00000598772 PTPRTO14522 1441 aa8.06□□□□□ -1.12
HERC3-213ENST00000598772 TOM1O60784 492 aa8.06□□□□□ -1.12
HERC3-213ENST00000598772 LTBP4Q8N2S1 1624 aa8.06□□□□□ -1.12
HERC3-213ENST00000598772 CFAP43Q8NDM7 1665 aa8.05□□□□□ -1.12
HERC3-213ENST00000598772 PLSCR2Q9NRY7 297 aa8.05□□□□□ -1.12
HERC3-213ENST00000598772 IQSEC2Q5JU85 1478 aa8.05□□□□□ -1.12
HERC3-213ENST00000598772 UHRF1BP1Q6BDS2 1440 aa8.04□□□□□ -1.12
HERC3-213ENST00000598772 NCKAP5LQ9HCH0 1330 aa8.03□□□□□ -1.12
HERC3-213ENST00000598772 RGS17Q9UGC6 210 aaPredicted RBP8.03□□□□□ -1.12
HERC3-213ENST00000598772 PHLDB1Q86UU1 1377 aa8.01□□□□□ -1.13
HERC3-213ENST00000598772 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.01□□□□□ -1.13
HERC3-213ENST00000598772 DSG3P32926 999 aa8.01□□□□□ -1.13
HERC3-213ENST00000598772 HNRNPUL2Q1KMD3 747 aaKnown RBP8.01□□□□□ -1.13
HERC3-213ENST00000598772 POTEAQ6S8J7 498 aa8.01□□□□□ -1.13
HERC3-213ENST00000598772 PREX1Q8TCU6 1659 aa8.01□□□□□ -1.13
HERC3-213ENST00000598772 FANCAO15360 1455 aa8□□□□□ -1.13
HERC3-213ENST00000598772 ESF1Q9H501 851 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms