RNA–Protein interactions for RNA: ENST00000597354.1

CAPN12-206, Transcript of calpain 12, humanhuman

TSL 3

Gene CAPN12, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-206ENST00000597354 EEA1Q15075 1411 aa27.92■■■□□ 2.06
CAPN12-206ENST00000597354 PRXQ9BXM0 1461 aa27.91■■■□□ 2.06
CAPN12-206ENST00000597354 CYB5RLQ6IPT4 315 aa27.91■■■□□ 2.06
CAPN12-206ENST00000597354 JPH4Q96JJ6 628 aa27.91■■■□□ 2.06
CAPN12-206ENST00000597354 ERCC6L2Q5T890 1561 aa27.9■■■□□ 2.06
CAPN12-206ENST00000597354 KIAA0586Q9BVV6 1533 aa27.9■■■□□ 2.06
CAPN12-206ENST00000597354 SHROOM2Q13796 1616 aa27.89■■■□□ 2.06
CAPN12-206ENST00000597354 ARAP1Q96P48 1450 aa27.89■■■□□ 2.05
CAPN12-206ENST00000597354 PRG4Q92954 1404 aaPredicted RBP27.84■■■□□ 2.05
CAPN12-206ENST00000597354 IQGAP2Q13576 1575 aa27.78■■■□□ 2.04
CAPN12-206ENST00000597354 EHMT2Q96KQ7 1210 aa27.78■■■□□ 2.04
CAPN12-206ENST00000597354 CTTNBP2Q8WZ74 1663 aa27.72■■■□□ 2.03
CAPN12-206ENST00000597354 KIF21BO75037 1637 aa27.67■■■□□ 2.02
CAPN12-206ENST00000597354 TTBK1Q5TCY1 1321 aaPredicted RBP27.66■■■□□ 2.02
CAPN12-206ENST00000597354 CARMIL2Q6F5E8 1435 aa27.61■■■□□ 2.01
CAPN12-206ENST00000597354 UGGT2Q9NYU1 1516 aa27.61■■■□□ 2.01
CAPN12-206ENST00000597354 DISP1Q96F81 1524 aa27.59■■■□□ 2.01
CAPN12-206ENST00000597354 RANGAP1P46060 587 aaPredicted RBP27.58■■■□□ 2.01
CAPN12-206ENST00000597354 UBTFP17480 764 aaKnown RBP27.56■■■□□ 2
CAPN12-206ENST00000597354 GOLGA3Q08378 1498 aa27.54■■■□□ 2
CAPN12-206ENST00000597354 TNIKQ9UKE5 1360 aa27.53■■■□□ 2
CAPN12-206ENST00000597354 KIAA0556O60303 1618 aa27.52■■■□□ 2
CAPN12-206ENST00000597354 PTPRGP23470 1445 aa27.52■■■□□ 2
CAPN12-206ENST00000597354 P3H3Q8IVL6 736 aa27.49■■□□□ 1.99
CAPN12-206ENST00000597354 ADCY10Q96PN6 1610 aa27.38■■□□□ 1.97
CAPN12-206ENST00000597354 SAMD9Q5K651 1589 aa27.36■■□□□ 1.97
CAPN12-206ENST00000597354 NPM1P06748 294 aaKnown RBP eCLIP27.32■■□□□ 1.96
CAPN12-206ENST00000597354 TRHP20396 242 aaPredicted RBP27.32■■□□□ 1.96
CAPN12-206ENST00000597354 UACAQ9BZF9 1416 aa27.32■■□□□ 1.96
CAPN12-206ENST00000597354 FHOD3Q2V2M9 1422 aa27.3■■□□□ 1.96
CAPN12-206ENST00000597354 PLB1Q6P1J6 1458 aa27.28■■□□□ 1.96
CAPN12-206ENST00000597354 ABCC2Q92887 1545 aa27.26■■□□□ 1.95
CAPN12-206ENST00000597354 EFCAB5A4FU69 1503 aa27.24■■□□□ 1.95
CAPN12-206ENST00000597354 UHRF1BP1LA0JNW5 1464 aa27.24■■□□□ 1.95
CAPN12-206ENST00000597354 LOC105371045A0A1W2PR82 267 aa27.23■■□□□ 1.95
CAPN12-206ENST00000597354 ABCA8O94911 1581 aa27.21■■□□□ 1.95
CAPN12-206ENST00000597354 ARHGAP35Q9NRY4 1499 aa27.19■■□□□ 1.94
CAPN12-206ENST00000597354 ARID3CA6NKF2 412 aa27.18■■□□□ 1.94
CAPN12-206ENST00000597354 KDM5BQ9UGL1 1544 aa27.13■■□□□ 1.93
CAPN12-206ENST00000597354 ZCCHC11Q5TAX3 1644 aaKnown RBP27.12■■□□□ 1.93
CAPN12-206ENST00000597354 MAPKBP1O60336 1514 aa27.12■■□□□ 1.93
CAPN12-206ENST00000597354 RAPGEF6Q8TEU7 1601 aa27.1■■□□□ 1.93
CAPN12-206ENST00000597354 CLIP1P30622 1438 aa27.07■■□□□ 1.92
CAPN12-206ENST00000597354 ASXL2Q76L83 1435 aa27.07■■□□□ 1.92
CAPN12-206ENST00000597354 FAM69CQ0P6D2 419 aa27.04■■□□□ 1.92
CAPN12-206ENST00000597354 ATP1B4Q9UN42 357 aaPredicted RBP27.03■■□□□ 1.92
CAPN12-206ENST00000597354 KIF13AQ9H1H9 1805 aa27.02■■□□□ 1.92
CAPN12-206ENST00000597354 ABCC10Q5T3U5 1492 aa27.02■■□□□ 1.92
CAPN12-206ENST00000597354 ATP10BO94823 1461 aa27.01■■□□□ 1.91
CAPN12-206ENST00000597354 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.01■■□□□ 1.91
CAPN12-206ENST00000597354 HNRNPUL2Q1KMD3 747 aaKnown RBP27.01■■□□□ 1.91
CAPN12-206ENST00000597354 NUP153P49790 1475 aaKnown RBP27■■□□□ 1.91
CAPN12-206ENST00000597354 FMN1Q68DA7 1419 aa27■■□□□ 1.91
CAPN12-206ENST00000597354 DIP2BQ9P265 1576 aa26.99■■□□□ 1.91
CAPN12-206ENST00000597354 CEP162Q5TB80 1403 aa26.99■■□□□ 1.91
CAPN12-206ENST00000597354 KCNH8Q96L42 1107 aa26.93■■□□□ 1.9
CAPN12-206ENST00000597354 WDR7Q9Y4E6 1490 aa26.93■■□□□ 1.9
CAPN12-206ENST00000597354 EPRSP07814 1512 aaKnown RBP26.9■■□□□ 1.9
CAPN12-206ENST00000597354 CDK13Q14004 1512 aaKnown RBP26.89■■□□□ 1.89
CAPN12-206ENST00000597354 HECW1Q76N89 1606 aa26.88■■□□□ 1.89
CAPN12-206ENST00000597354 PCF11O94913 1555 aaKnown RBP26.86■■□□□ 1.89
CAPN12-206ENST00000597354 TSPOAP1O95153 1857 aa26.85■■□□□ 1.89
CAPN12-206ENST00000597354 GLI2P10070 1586 aa26.83■■□□□ 1.89
CAPN12-206ENST00000597354 CASKIN1Q8WXD9 1431 aa26.82■■□□□ 1.88
CAPN12-206ENST00000597354 PLEKHD1A6NEE1 506 aa26.81■■□□□ 1.88
CAPN12-206ENST00000597354 LRRIQ1Q96JM4 1722 aa26.8■■□□□ 1.88
CAPN12-206ENST00000597354 FYCO1Q9BQS8 1478 aa26.75■■□□□ 1.87
CAPN12-206ENST00000597354 MAP3K4Q9Y6R4 1608 aa26.74■■□□□ 1.87
CAPN12-206ENST00000597354 PPRC1Q5VV67 1664 aaKnown RBP26.7■■□□□ 1.87
CAPN12-206ENST00000597354 CD109Q6YHK3 1445 aa26.7■■□□□ 1.86
CAPN12-206ENST00000597354 CDK11AQ9UQ88 783 aaPredicted RBP26.69■■□□□ 1.86
CAPN12-206ENST00000597354 CFAP43Q8NDM7 1665 aa26.68■■□□□ 1.86
CAPN12-206ENST00000597354 CCDC18Q5T9S5 1454 aa26.68■■□□□ 1.86
CAPN12-206ENST00000597354 ABCA9Q8IUA7 1624 aa26.64■■□□□ 1.85
CAPN12-206ENST00000597354 VPS8Q8N3P4 1428 aa26.63■■□□□ 1.85
CAPN12-206ENST00000597354 TROQ12816 1431 aaPredicted RBP26.61■■□□□ 1.85
CAPN12-206ENST00000597354 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.6■■□□□ 1.85
CAPN12-206ENST00000597354 MAGI3Q5TCQ9 1506 aa26.6■■□□□ 1.85
CAPN12-206ENST00000597354 TEX14Q8IWB6 1497 aa26.59■■□□□ 1.85
CAPN12-206ENST00000597354 KIF14Q15058 1648 aa26.58■■□□□ 1.85
CAPN12-206ENST00000597354 TTC37Q6PGP7 1564 aa26.58■■□□□ 1.85
CAPN12-206ENST00000597354 KDM6BO15054 1643 aa26.54■■□□□ 1.84
CAPN12-206ENST00000597354 COL17A1Q9UMD9 1497 aaPredicted RBP26.49■■□□□ 1.83
CAPN12-206ENST00000597354 MTUS2Q5JR59 1369 aa26.48■■□□□ 1.83
CAPN12-206ENST00000597354 TIAM1Q13009 1591 aa26.44■■□□□ 1.82
CAPN12-206ENST00000597354 MYO5CQ9NQX4 1742 aa26.42■■□□□ 1.82
CAPN12-206ENST00000597354 PLCH2O75038 1416 aa26.42■■□□□ 1.82
CAPN12-206ENST00000597354 FANCAO15360 1455 aa26.42■■□□□ 1.82
CAPN12-206ENST00000597354 NEO1Q92859 1461 aa26.4■■□□□ 1.82
CAPN12-206ENST00000597354 EHBP1L1Q8N3D4 1523 aa26.39■■□□□ 1.81
CAPN12-206ENST00000597354 APLP2Q06481 763 aa26.37■■□□□ 1.81
CAPN12-206ENST00000597354 KANK4Q5T7N3 995 aaPredicted RBP26.37■■□□□ 1.81
CAPN12-206ENST00000597354 AKNAQ7Z591 1439 aa26.37■■□□□ 1.81
CAPN12-206ENST00000597354 ARHGAP5Q13017 1502 aa26.36■■□□□ 1.81
CAPN12-206ENST00000597354 EFCAB2Q5VUJ9 269 aa26.35■■□□□ 1.81
CAPN12-206ENST00000597354 ARAP3Q8WWN8 1544 aa26.34■■□□□ 1.81
CAPN12-206ENST00000597354 PHLDB1Q86UU1 1377 aa26.34■■□□□ 1.81
CAPN12-206ENST00000597354 CFAP74Q9C0B2 1584 aa26.34■■□□□ 1.81
CAPN12-206ENST00000597354 RAPGEF3O95398 923 aa26.34■■□□□ 1.81
CAPN12-206ENST00000597354 CDC42BPBQ9Y5S2 1711 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms