RNA–Protein interactions for RNA: ENST00000597297.1

PDE4C-210, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best) BASIC

Gene PDE4C, Length 1,559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-210ENST00000597297 RIMBP3BA6NNM3 1639 aa18.92■□□□□ 0.62
PDE4C-210ENST00000597297 RIMBP3Q9UFD9 1639 aa18.92■□□□□ 0.62
PDE4C-210ENST00000597297 CUL7Q14999 1698 aa18.91■□□□□ 0.62
PDE4C-210ENST00000597297 GOLGA3Q08378 1498 aa18.9■□□□□ 0.62
PDE4C-210ENST00000597297 CYB5RLQ6IPT4 315 aa18.86■□□□□ 0.61
PDE4C-210ENST00000597297 JPH4Q96JJ6 628 aa18.85■□□□□ 0.61
PDE4C-210ENST00000597297 TNIKQ9UKE5 1360 aa18.83■□□□□ 0.61
PDE4C-210ENST00000597297 RAPGEF2Q9Y4G8 1499 aa18.81■□□□□ 0.6
PDE4C-210ENST00000597297 ARAP1Q96P48 1450 aa18.79■□□□□ 0.6
PDE4C-210ENST00000597297 ERCC6L2Q5T890 1561 aa18.78■□□□□ 0.6
PDE4C-210ENST00000597297 KIAA0586Q9BVV6 1533 aa18.77■□□□□ 0.6
PDE4C-210ENST00000597297 PRXQ9BXM0 1461 aa18.77■□□□□ 0.59
PDE4C-210ENST00000597297 SHROOM2Q13796 1616 aa18.76■□□□□ 0.59
PDE4C-210ENST00000597297 UBTFP17480 764 aaKnown RBP18.75■□□□□ 0.59
PDE4C-210ENST00000597297 CEP162Q5TB80 1403 aa18.75■□□□□ 0.59
PDE4C-210ENST00000597297 PRG4Q92954 1404 aaPredicted RBP18.75■□□□□ 0.59
PDE4C-210ENST00000597297 IQGAP2Q13576 1575 aa18.64■□□□□ 0.57
PDE4C-210ENST00000597297 CLIP1P30622 1438 aa18.58■□□□□ 0.56
PDE4C-210ENST00000597297 TTBK1Q5TCY1 1321 aaPredicted RBP18.58■□□□□ 0.56
PDE4C-210ENST00000597297 CTTNBP2Q8WZ74 1663 aa18.57■□□□□ 0.56
PDE4C-210ENST00000597297 DISP1Q96F81 1524 aa18.56■□□□□ 0.56
PDE4C-210ENST00000597297 UGGT2Q9NYU1 1516 aa18.56■□□□□ 0.56
PDE4C-210ENST00000597297 CARMIL2Q6F5E8 1435 aa18.56■□□□□ 0.56
PDE4C-210ENST00000597297 PTPRGP23470 1445 aa18.53■□□□□ 0.56
PDE4C-210ENST00000597297 RANGAP1P46060 587 aaPredicted RBP18.5■□□□□ 0.55
PDE4C-210ENST00000597297 P3H3Q8IVL6 736 aa18.48■□□□□ 0.55
PDE4C-210ENST00000597297 KIAA0556O60303 1618 aa18.46■□□□□ 0.55
PDE4C-210ENST00000597297 PCGF6Q9BYE7 350 aa18.46■□□□□ 0.55
PDE4C-210ENST00000597297 TRHP20396 242 aaPredicted RBP18.45■□□□□ 0.54
PDE4C-210ENST00000597297 TRIM26Q12899 539 aaPredicted RBP18.44■□□□□ 0.54
PDE4C-210ENST00000597297 VPS8Q8N3P4 1428 aa18.44■□□□□ 0.54
PDE4C-210ENST00000597297 NPM1P06748 294 aaKnown RBP eCLIP18.42■□□□□ 0.54
PDE4C-210ENST00000597297 ADCY10Q96PN6 1610 aa18.41■□□□□ 0.54
PDE4C-210ENST00000597297 UACAQ9BZF9 1416 aa18.39■□□□□ 0.53
PDE4C-210ENST00000597297 ARHGAP35Q9NRY4 1499 aa18.38■□□□□ 0.53
PDE4C-210ENST00000597297 SAMD9Q5K651 1589 aa18.35■□□□□ 0.53
PDE4C-210ENST00000597297 PLB1Q6P1J6 1458 aa18.34■□□□□ 0.53
PDE4C-210ENST00000597297 UHRF1BP1LA0JNW5 1464 aa18.33■□□□□ 0.53
PDE4C-210ENST00000597297 PPARGC1BQ86YN6 1023 aaKnown RBP18.33■□□□□ 0.52
PDE4C-210ENST00000597297 ABCC2Q92887 1545 aa18.31■□□□□ 0.52
PDE4C-210ENST00000597297 FHOD3Q2V2M9 1422 aa18.3■□□□□ 0.52
PDE4C-210ENST00000597297 EFCAB5A4FU69 1503 aa18.29■□□□□ 0.52
PDE4C-210ENST00000597297 ABCA8O94911 1581 aa18.28■□□□□ 0.52
PDE4C-210ENST00000597297 KDM5BQ9UGL1 1544 aa18.26■□□□□ 0.51
PDE4C-210ENST00000597297 ARID3CA6NKF2 412 aa18.25■□□□□ 0.51
PDE4C-210ENST00000597297 MAPKBP1O60336 1514 aa18.25■□□□□ 0.51
PDE4C-210ENST00000597297 FAM69CQ0P6D2 419 aa18.25■□□□□ 0.51
PDE4C-210ENST00000597297 ASXL2Q76L83 1435 aa18.22■□□□□ 0.51
PDE4C-210ENST00000597297 ABCC10Q5T3U5 1492 aa18.21■□□□□ 0.51
PDE4C-210ENST00000597297 APLP2Q06481 763 aa18.21■□□□□ 0.51
PDE4C-210ENST00000597297 ZCCHC11Q5TAX3 1644 aaKnown RBP18.21■□□□□ 0.51
PDE4C-210ENST00000597297 KIF13AQ9H1H9 1805 aa18.21■□□□□ 0.5
PDE4C-210ENST00000597297 ATP10BO94823 1461 aa18.19■□□□□ 0.5
PDE4C-210ENST00000597297 RAPGEF6Q8TEU7 1601 aa18.18■□□□□ 0.5
PDE4C-210ENST00000597297 DIP2BQ9P265 1576 aa18.15■□□□□ 0.5
PDE4C-210ENST00000597297 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.15■□□□□ 0.5
PDE4C-210ENST00000597297 HNRNPUL2Q1KMD3 747 aaKnown RBP18.15■□□□□ 0.5
PDE4C-210ENST00000597297 KCNH8Q96L42 1107 aa18.15■□□□□ 0.5
PDE4C-210ENST00000597297 PCF11O94913 1555 aaKnown RBP18.15■□□□□ 0.5
PDE4C-210ENST00000597297 ATP1B4Q9UN42 357 aaPredicted RBP18.14■□□□□ 0.49
PDE4C-210ENST00000597297 NUP153P49790 1475 aaKnown RBP18.14■□□□□ 0.49
PDE4C-210ENST00000597297 FMN1Q68DA7 1419 aa18.12■□□□□ 0.49
PDE4C-210ENST00000597297 MAP3K1Q13233 1512 aa18.11■□□□□ 0.49
PDE4C-210ENST00000597297 EPRSP07814 1512 aaKnown RBP18.1■□□□□ 0.49
PDE4C-210ENST00000597297 WDR7Q9Y4E6 1490 aa18.1■□□□□ 0.49
PDE4C-210ENST00000597297 TIAM1Q13009 1591 aa18.1■□□□□ 0.49
PDE4C-210ENST00000597297 CFAP43Q8NDM7 1665 aa18.1■□□□□ 0.49
PDE4C-210ENST00000597297 FYCO1Q9BQS8 1478 aa18.09■□□□□ 0.49
PDE4C-210ENST00000597297 TSPOAP1O95153 1857 aa18.07■□□□□ 0.48
PDE4C-210ENST00000597297 CASKIN1Q8WXD9 1431 aa18.06■□□□□ 0.48
PDE4C-210ENST00000597297 GLI2P10070 1586 aa18.06■□□□□ 0.48
PDE4C-210ENST00000597297 PLEKHD1A6NEE1 506 aa18.06■□□□□ 0.48
PDE4C-210ENST00000597297 CDK13Q14004 1512 aaKnown RBP18.03■□□□□ 0.48
PDE4C-210ENST00000597297 KANK4Q5T7N3 995 aaPredicted RBP18.03■□□□□ 0.48
PDE4C-210ENST00000597297 HRCP23327 699 aa18.02■□□□□ 0.48
PDE4C-210ENST00000597297 HECW1Q76N89 1606 aa17.99■□□□□ 0.47
PDE4C-210ENST00000597297 LRRIQ1Q96JM4 1722 aa17.99■□□□□ 0.47
PDE4C-210ENST00000597297 MAP3K4Q9Y6R4 1608 aa17.98■□□□□ 0.47
PDE4C-210ENST00000597297 CD109Q6YHK3 1445 aa17.98■□□□□ 0.47
PDE4C-210ENST00000597297 LRRC9Q6ZRR7 1453 aa17.98■□□□□ 0.47
PDE4C-210ENST00000597297 PPRC1Q5VV67 1664 aaKnown RBP17.97■□□□□ 0.47
PDE4C-210ENST00000597297 CDK11AQ9UQ88 783 aaPredicted RBP17.96■□□□□ 0.46
PDE4C-210ENST00000597297 ABCA9Q8IUA7 1624 aa17.91■□□□□ 0.46
PDE4C-210ENST00000597297 MAGI3Q5TCQ9 1506 aa17.9■□□□□ 0.46
PDE4C-210ENST00000597297 RRBP1Q9P2E9 1410 aaKnown RBP17.9■□□□□ 0.46
PDE4C-210ENST00000597297 CCDC18Q5T9S5 1454 aa17.89■□□□□ 0.45
PDE4C-210ENST00000597297 TEX14Q8IWB6 1497 aa17.88■□□□□ 0.45
PDE4C-210ENST00000597297 COL17A1Q9UMD9 1497 aaPredicted RBP17.88■□□□□ 0.45
PDE4C-210ENST00000597297 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.87■□□□□ 0.45
PDE4C-210ENST00000597297 TROQ12816 1431 aaPredicted RBP17.87■□□□□ 0.45
PDE4C-210ENST00000597297 KDM6BO15054 1643 aa17.85■□□□□ 0.45
PDE4C-210ENST00000597297 EHBP1L1Q8N3D4 1523 aa17.83■□□□□ 0.45
PDE4C-210ENST00000597297 TTC37Q6PGP7 1564 aa17.82■□□□□ 0.44
PDE4C-210ENST00000597297 KIF14Q15058 1648 aa17.82■□□□□ 0.44
PDE4C-210ENST00000597297 CCNB3Q8WWL7 1395 aa17.81■□□□□ 0.44
PDE4C-210ENST00000597297 SUPT6HQ7KZ85 1726 aaKnown RBP17.81■□□□□ 0.44
PDE4C-210ENST00000597297 MTUS2Q5JR59 1369 aa17.81■□□□□ 0.44
PDE4C-210ENST00000597297 PHLDB1Q86UU1 1377 aa17.81■□□□□ 0.44
PDE4C-210ENST00000597297 PLCH2O75038 1416 aa17.79■□□□□ 0.44
PDE4C-210ENST00000597297 ZEB1P37275 1124 aaPredicted RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms