RNA–Protein interactions for RNA: ENST00000597198.5

IRF3-217, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene IRF3, Length 1,741 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-217ENST00000597198 ARHGEF11O15085 1522 aa27.05■■□□□ 1.92
IRF3-217ENST00000597198 KIF21BO75037 1637 aa27.04■■□□□ 1.92
IRF3-217ENST00000597198 FAM9AQ8IZU1 332 aaPredicted RBP27.04■■□□□ 1.92
IRF3-217ENST00000597198 CTTNBP2Q8WZ74 1663 aa26.93■■□□□ 1.9
IRF3-217ENST00000597198 SHROOM2Q13796 1616 aa26.93■■□□□ 1.9
IRF3-217ENST00000597198 KIAA0586Q9BVV6 1533 aa26.91■■□□□ 1.9
IRF3-217ENST00000597198 IQGAP2Q13576 1575 aa26.85■■□□□ 1.89
IRF3-217ENST00000597198 CYB5RLQ6IPT4 315 aa26.82■■□□□ 1.88
IRF3-217ENST00000597198 GOLGA3Q08378 1498 aa26.82■■□□□ 1.88
IRF3-217ENST00000597198 ARAP1Q96P48 1450 aa26.79■■□□□ 1.88
IRF3-217ENST00000597198 ERCC6L2Q5T890 1561 aa26.75■■□□□ 1.87
IRF3-217ENST00000597198 UGGT2Q9NYU1 1516 aa26.73■■□□□ 1.87
IRF3-217ENST00000597198 JPH4Q96JJ6 628 aa26.71■■□□□ 1.87
IRF3-217ENST00000597198 PRG4Q92954 1404 aaPredicted RBP26.67■■□□□ 1.86
IRF3-217ENST00000597198 DISP1Q96F81 1524 aa26.65■■□□□ 1.86
IRF3-217ENST00000597198 EHMT2Q96KQ7 1210 aa26.62■■□□□ 1.85
IRF3-217ENST00000597198 KIAA0556O60303 1618 aa26.61■■□□□ 1.85
IRF3-217ENST00000597198 SAMD9Q5K651 1589 aa26.61■■□□□ 1.85
IRF3-217ENST00000597198 UBTFP17480 764 aaKnown RBP26.57■■□□□ 1.84
IRF3-217ENST00000597198 TNIKQ9UKE5 1360 aa26.54■■□□□ 1.84
IRF3-217ENST00000597198 CARMIL2Q6F5E8 1435 aa26.52■■□□□ 1.84
IRF3-217ENST00000597198 TRHP20396 242 aaPredicted RBP26.5■■□□□ 1.83
IRF3-217ENST00000597198 EFCAB5A4FU69 1503 aa26.49■■□□□ 1.83
IRF3-217ENST00000597198 LOC105371045A0A1W2PR82 267 aa26.48■■□□□ 1.83
IRF3-217ENST00000597198 ARHGAP35Q9NRY4 1499 aa26.43■■□□□ 1.82
IRF3-217ENST00000597198 PTPRGP23470 1445 aa26.37■■□□□ 1.81
IRF3-217ENST00000597198 FHOD3Q2V2M9 1422 aa26.36■■□□□ 1.81
IRF3-217ENST00000597198 RANGAP1P46060 587 aaPredicted RBP26.35■■□□□ 1.81
IRF3-217ENST00000597198 CEP162Q5TB80 1403 aa26.33■■□□□ 1.81
IRF3-217ENST00000597198 ADCY10Q96PN6 1610 aa26.33■■□□□ 1.81
IRF3-217ENST00000597198 CLIP1P30622 1438 aa26.33■■□□□ 1.81
IRF3-217ENST00000597198 P3H3Q8IVL6 736 aa26.31■■□□□ 1.8
IRF3-217ENST00000597198 ABCA8O94911 1581 aa26.3■■□□□ 1.8
IRF3-217ENST00000597198 PLB1Q6P1J6 1458 aa26.27■■□□□ 1.8
IRF3-217ENST00000597198 UHRF1BP1LA0JNW5 1464 aa26.26■■□□□ 1.79
IRF3-217ENST00000597198 ABCC2Q92887 1545 aa26.26■■□□□ 1.79
IRF3-217ENST00000597198 UACAQ9BZF9 1416 aa26.25■■□□□ 1.79
IRF3-217ENST00000597198 RAPGEF6Q8TEU7 1601 aa26.22■■□□□ 1.79
IRF3-217ENST00000597198 TTBK1Q5TCY1 1321 aaPredicted RBP26.21■■□□□ 1.79
IRF3-217ENST00000597198 FMN1Q68DA7 1419 aa26.18■■□□□ 1.78
IRF3-217ENST00000597198 KDM5BQ9UGL1 1544 aa26.15■■□□□ 1.78
IRF3-217ENST00000597198 NUP153P49790 1475 aaKnown RBP26.13■■□□□ 1.77
IRF3-217ENST00000597198 PCF11O94913 1555 aaKnown RBP26.12■■□□□ 1.77
IRF3-217ENST00000597198 ZCCHC11Q5TAX3 1644 aaKnown RBP26.12■■□□□ 1.77
IRF3-217ENST00000597198 LRRIQ1Q96JM4 1722 aa26.11■■□□□ 1.77
IRF3-217ENST00000597198 HECW1Q76N89 1606 aa26.07■■□□□ 1.76
IRF3-217ENST00000597198 MAPKBP1O60336 1514 aa26.07■■□□□ 1.76
IRF3-217ENST00000597198 CASKIN1Q8WXD9 1431 aa26.06■■□□□ 1.76
IRF3-217ENST00000597198 ATP10BO94823 1461 aa26.04■■□□□ 1.76
IRF3-217ENST00000597198 FYCO1Q9BQS8 1478 aa26.04■■□□□ 1.76
IRF3-217ENST00000597198 VPS8Q8N3P4 1428 aa26■■□□□ 1.75
IRF3-217ENST00000597198 EPRSP07814 1512 aaKnown RBP25.98■■□□□ 1.75
IRF3-217ENST00000597198 CDK13Q14004 1512 aaKnown RBP25.97■■□□□ 1.75
IRF3-217ENST00000597198 ASXL2Q76L83 1435 aa25.93■■□□□ 1.74
IRF3-217ENST00000597198 NPM1P06748 294 aaKnown RBP eCLIP25.91■■□□□ 1.74
IRF3-217ENST00000597198 KIF13AQ9H1H9 1805 aa25.9■■□□□ 1.74
IRF3-217ENST00000597198 CCDC18Q5T9S5 1454 aa25.9■■□□□ 1.74
IRF3-217ENST00000597198 ARID3CA6NKF2 412 aa25.89■■□□□ 1.74
IRF3-217ENST00000597198 WDR7Q9Y4E6 1490 aa25.88■■□□□ 1.73
IRF3-217ENST00000597198 DIP2BQ9P265 1576 aa25.88■■□□□ 1.73
IRF3-217ENST00000597198 CFAP43Q8NDM7 1665 aa25.86■■□□□ 1.73
IRF3-217ENST00000597198 ABCC10Q5T3U5 1492 aa25.84■■□□□ 1.73
IRF3-217ENST00000597198 MAGI3Q5TCQ9 1506 aa25.82■■□□□ 1.72
IRF3-217ENST00000597198 ATP1B4Q9UN42 357 aaPredicted RBP25.8■■□□□ 1.72
IRF3-217ENST00000597198 GLI2P10070 1586 aa25.79■■□□□ 1.72
IRF3-217ENST00000597198 TIAM1Q13009 1591 aa25.79■■□□□ 1.72
IRF3-217ENST00000597198 MAP3K1Q13233 1512 aa25.77■■□□□ 1.72
IRF3-217ENST00000597198 FAM69CQ0P6D2 419 aa25.77■■□□□ 1.72
IRF3-217ENST00000597198 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.74■■□□□ 1.71
IRF3-217ENST00000597198 HNRNPUL2Q1KMD3 747 aaKnown RBP25.74■■□□□ 1.71
IRF3-217ENST00000597198 TROQ12816 1431 aaPredicted RBP25.73■■□□□ 1.71
IRF3-217ENST00000597198 MAP3K4Q9Y6R4 1608 aa25.73■■□□□ 1.71
IRF3-217ENST00000597198 ABCA9Q8IUA7 1624 aa25.73■■□□□ 1.71
IRF3-217ENST00000597198 KIF14Q15058 1648 aa25.72■■□□□ 1.71
IRF3-217ENST00000597198 AEBP2Q6ZN18 517 aaPredicted RBP25.71■■□□□ 1.71
IRF3-217ENST00000597198 PLEKHD1A6NEE1 506 aa25.7■■□□□ 1.7
IRF3-217ENST00000597198 PPRC1Q5VV67 1664 aaKnown RBP25.68■■□□□ 1.7
IRF3-217ENST00000597198 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.68■■□□□ 1.73e-7■□□□□ 11.1
IRF3-217ENST00000597198 TTC37Q6PGP7 1564 aa25.67■■□□□ 1.7
IRF3-217ENST00000597198 EHBP1L1Q8N3D4 1523 aa25.67■■□□□ 1.7
IRF3-217ENST00000597198 CDK11AQ9UQ88 783 aaPredicted RBP25.66■■□□□ 1.7
IRF3-217ENST00000597198 LRRC9Q6ZRR7 1453 aa25.64■■□□□ 1.69
IRF3-217ENST00000597198 KCNH8Q96L42 1107 aa25.63■■□□□ 1.69
IRF3-217ENST00000597198 TSPOAP1O95153 1857 aa25.61■■□□□ 1.69
IRF3-217ENST00000597198 MTUS2Q5JR59 1369 aa25.59■■□□□ 1.69
IRF3-217ENST00000597198 KANK4Q5T7N3 995 aaPredicted RBP25.57■■□□□ 1.68
IRF3-217ENST00000597198 SUPT6HQ7KZ85 1726 aaKnown RBP25.56■■□□□ 1.68
IRF3-217ENST00000597198 MYO5CQ9NQX4 1742 aa25.56■■□□□ 1.68
IRF3-217ENST00000597198 CDC42BPAQ5VT25 1732 aa25.56■■□□□ 1.68
IRF3-217ENST00000597198 CD109Q6YHK3 1445 aa25.55■■□□□ 1.68
IRF3-217ENST00000597198 CDC42BPBQ9Y5S2 1711 aa25.52■■□□□ 1.68
IRF3-217ENST00000597198 PREX2Q70Z35 1606 aa25.52■■□□□ 1.68
IRF3-217ENST00000597198 ARAP3Q8WWN8 1544 aa25.51■■□□□ 1.67
IRF3-217ENST00000597198 NCOA2Q15596 1464 aa25.5■■□□□ 1.67
IRF3-217ENST00000597198 KDM6BO15054 1643 aa25.48■■□□□ 1.67
IRF3-217ENST00000597198 APLP2Q06481 763 aa25.47■■□□□ 1.67
IRF3-217ENST00000597198 PLCH2O75038 1416 aa25.47■■□□□ 1.67
IRF3-217ENST00000597198 GPATCH8Q9UKJ3 1502 aaKnown RBP25.45■■□□□ 1.67
IRF3-217ENST00000597198 TEX14Q8IWB6 1497 aa25.45■■□□□ 1.66
IRF3-217ENST00000597198 ITSN2Q9NZM3 1697 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms