RNA–Protein interactions for RNA: ENST00000596825.5

ZNF544-208, Transcript of zinc finger protein 544, humanhuman

TSL 1 (best) BASIC

Gene ZNF544, Length 3,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-208ENST00000596825 DHX57Q6P158 1386 aaKnown RBP17.82■□□□□ 0.44
ZNF544-208ENST00000596825 IRX6P78412 446 aaPredicted RBP17.81■□□□□ 0.44
ZNF544-208ENST00000596825 RAB3GAP2Q9H2M9 1393 aa17.8■□□□□ 0.44
ZNF544-208ENST00000596825 CADPSQ9ULU8 1353 aa17.78■□□□□ 0.44
ZNF544-208ENST00000596825 CUX1P39880 1505 aa17.78■□□□□ 0.44
ZNF544-208ENST00000596825 MTUS2Q5JR59 1369 aa17.75■□□□□ 0.43
ZNF544-208ENST00000596825 FKBP8Q14318 412 aa17.71■□□□□ 0.43
ZNF544-208ENST00000596825 PHLDB1Q86UU1 1377 aa17.7■□□□□ 0.42
ZNF544-208ENST00000596825 FGD5Q6ZNL6 1462 aa17.69■□□□□ 0.42
ZNF544-208ENST00000596825 ARHGAP35Q9NRY4 1499 aa17.68■□□□□ 0.42
ZNF544-208ENST00000596825 NCAPD3P42695 1498 aa17.67■□□□□ 0.42
ZNF544-208ENST00000596825 PRXQ9BXM0 1461 aa17.66■□□□□ 0.42
ZNF544-208ENST00000596825 ANP32CO43423 234 aa17.64■□□□□ 0.42
ZNF544-208ENST00000596825 PELP1Q8IZL8 1130 aaKnown RBP17.64■□□□□ 0.41
ZNF544-208ENST00000596825 TONSLQ96HA7 1378 aa17.64■□□□□ 0.41
ZNF544-208ENST00000596825 FANCD2Q9BXW9 1451 aa17.61■□□□□ 0.41
ZNF544-208ENST00000596825 FAM9BQ8IZU0 186 aa17.61■□□□□ 0.41
ZNF544-208ENST00000596825 CFTRP13569 1480 aa17.6■□□□□ 0.41
ZNF544-208ENST00000596825 NEFLP07196 543 aa17.6■□□□□ 0.41
ZNF544-208ENST00000596825 TOP2BQ02880 1626 aa17.59■□□□□ 0.41
ZNF544-208ENST00000596825 KDM2AQ9Y2K7 1162 aa17.58■□□□□ 0.41
ZNF544-208ENST00000596825 HNRNPUQ00839 825 aaKnown RBP eCLIP17.58■□□□□ 0.4
ZNF544-208ENST00000596825 SENP3Q9H4L4 574 aaPredicted RBP17.58■□□□□ 0.4
ZNF544-208ENST00000596825 SALL2Q9Y467 1007 aaPredicted RBP17.58■□□□□ 0.4
ZNF544-208ENST00000596825 SUPT16HQ9Y5B9 1047 aaKnown RBP17.58■□□□□ 0.4
ZNF544-208ENST00000596825 ZNF644Q9H582 1327 aaPredicted RBP17.56■□□□□ 0.4
ZNF544-208ENST00000596825 SETD5Q9C0A6 1442 aa17.55■□□□□ 0.4
ZNF544-208ENST00000596825 CHMP7Q8WUX9 453 aaPredicted RBP17.53■□□□□ 0.4
ZNF544-208ENST00000596825 MYT1LQ9UL68 1186 aa17.52■□□□□ 0.4
ZNF544-208ENST00000596825 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.5■□□□□ 0.39
ZNF544-208ENST00000596825 PEG3Q9GZU2 1588 aa17.49■□□□□ 0.39
ZNF544-208ENST00000596825 PPP1R15AO75807 674 aaPredicted RBP17.48■□□□□ 0.39
ZNF544-208ENST00000596825 SLC4A1APQ9BWU0 796 aaKnown RBP17.48■□□□□ 0.39
ZNF544-208ENST00000596825 AQRO60306 1485 aaKnown RBP eCLIP17.48■□□□□ 0.396e-7■■■■■ 28.9
ZNF544-208ENST00000596825 PDS5BQ9NTI5 1447 aa17.46■□□□□ 0.39
ZNF544-208ENST00000596825 CC2D2AQ9P2K1 1620 aa17.46■□□□□ 0.39
ZNF544-208ENST00000596825 RGL3Q3MIN7 710 aa17.43■□□□□ 0.38
ZNF544-208ENST00000596825 HSPA5P11021 654 aaKnown RBP17.41■□□□□ 0.38
ZNF544-208ENST00000596825 LRRC9Q6ZRR7 1453 aa17.4■□□□□ 0.38
ZNF544-208ENST00000596825 FHAD1B1AJZ9 1412 aa17.4■□□□□ 0.38
ZNF544-208ENST00000596825 L3MBTL2Q969R5 705 aa17.39■□□□□ 0.38
ZNF544-208ENST00000596825 POLA1P09884 1462 aaPredicted RBP17.39■□□□□ 0.37
ZNF544-208ENST00000596825 CFDP1Q9UEE9 299 aaPredicted RBP17.37■□□□□ 0.37
ZNF544-208ENST00000596825 RRBP1Q9P2E9 1410 aaKnown RBP17.37■□□□□ 0.37
ZNF544-208ENST00000596825 CLSPNQ9HAW4 1339 aa17.37■□□□□ 0.37
ZNF544-208ENST00000596825 CCDC184Q52MB2 194 aa17.35■□□□□ 0.37
ZNF544-208ENST00000596825 MPHOSPH9Q99550 1183 aa17.35■□□□□ 0.37
ZNF544-208ENST00000596825 MRS2Q9HD23 443 aa17.35■□□□□ 0.37
ZNF544-208ENST00000596825 ERICH3Q5RHP9 1530 aa17.32■□□□□ 0.36
ZNF544-208ENST00000596825 EIF4G2P78344 907 aaKnown RBP eCLIP17.32■□□□□ 0.36
ZNF544-208ENST00000596825 WDR97A6NE52 1622 aa17.31■□□□□ 0.36
ZNF544-208ENST00000596825 TOPBP1Q92547 1522 aa17.31■□□□□ 0.36
ZNF544-208ENST00000596825 HMGXB3Q12766 1538 aa17.31■□□□□ 0.36
ZNF544-208ENST00000596825 GAPVD1Q14C86 1478 aa17.29■□□□□ 0.36
ZNF544-208ENST00000596825 PTPRKQ15262 1439 aa17.28■□□□□ 0.36
ZNF544-208ENST00000596825 CDK11AQ9UQ88 783 aaPredicted RBP17.27■□□□□ 0.35
ZNF544-208ENST00000596825 C11orf95C9JLR9 678 aaPredicted RBP17.26■□□□□ 0.35
ZNF544-208ENST00000596825 HNRNPMP52272 730 aaKnown RBP eCLIP17.26■□□□□ 0.35
ZNF544-208ENST00000596825 FGD6Q6ZV73 1430 aa17.24■□□□□ 0.35
ZNF544-208ENST00000596825 TSHZ2Q9NRE2 1034 aa17.24■□□□□ 0.35
ZNF544-208ENST00000596825 PKD2Q13563 968 aa17.24■□□□□ 0.35
ZNF544-208ENST00000596825 BIVM-ERCC5R4GMW8 1640 aa17.24■□□□□ 0.35
ZNF544-208ENST00000596825 FMN1Q68DA7 1419 aa17.22■□□□□ 0.35
ZNF544-208ENST00000596825 TIAM1Q13009 1591 aa17.22■□□□□ 0.35
ZNF544-208ENST00000596825 PCF11O94913 1555 aaKnown RBP17.21■□□□□ 0.35
ZNF544-208ENST00000596825 NBPF8Q3BBV2 869 aa17.21■□□□□ 0.34
ZNF544-208ENST00000596825 CCDC18Q5T9S5 1454 aa17.21■□□□□ 0.34
ZNF544-208ENST00000596825 B4GALNT3Q6L9W6 998 aa17.2■□□□□ 0.34
ZNF544-208ENST00000596825 URB2Q14146 1524 aaKnown RBP17.2■□□□□ 0.34
ZNF544-208ENST00000596825 PLEKHD1A6NEE1 506 aa17.2■□□□□ 0.34
ZNF544-208ENST00000596825 ERCC6Q03468 1493 aa17.2■□□□□ 0.34
ZNF544-208ENST00000596825 DCAF11Q8TEB1 546 aa17.18■□□□□ 0.34
ZNF544-208ENST00000596825 WASHC2AQ641Q2 1341 aa17.18■□□□□ 0.34
ZNF544-208ENST00000596825 TSPY4P0CV99 314 aa17.18■□□□□ 0.34
ZNF544-208ENST00000596825 TSPY10P0CW01 314 aa17.18■□□□□ 0.34
ZNF544-208ENST00000596825 JPH4Q96JJ6 628 aa17.18■□□□□ 0.34
ZNF544-208ENST00000596825 NCOA2Q15596 1464 aa17.17■□□□□ 0.34
ZNF544-208ENST00000596825 MAPKBP1O60336 1514 aa17.17■□□□□ 0.34
ZNF544-208ENST00000596825 CDK13Q14004 1512 aaKnown RBP17.15■□□□□ 0.34
ZNF544-208ENST00000596825 ERICH6Q7L0X2 663 aa17.14■□□□□ 0.33
ZNF544-208ENST00000596825 CASKIN1Q8WXD9 1431 aa17.13■□□□□ 0.33
ZNF544-208ENST00000596825 ZNF608Q9ULD9 1512 aaPredicted RBP17.13■□□□□ 0.33
ZNF544-208ENST00000596825 CARD11Q9BXL7 1154 aa17.13■□□□□ 0.33
ZNF544-208ENST00000596825 TMC1Q8TDI8 760 aa17.1■□□□□ 0.33
ZNF544-208ENST00000596825 CHGAP10645 457 aaKnown RBP17.09■□□□□ 0.33
ZNF544-208ENST00000596825 MYOM3Q5VTT5 1437 aa17.08■□□□□ 0.33
ZNF544-208ENST00000596825 CC2D1BQ5T0F9 858 aaKnown RBP17.08■□□□□ 0.32
ZNF544-208ENST00000596825 PRG4Q92954 1404 aaPredicted RBP17.07■□□□□ 0.32
ZNF544-208ENST00000596825 NAIPQ13075 1403 aa17.06■□□□□ 0.32
ZNF544-208ENST00000596825 ABCA10Q8WWZ4 1543 aa17.06■□□□□ 0.32
ZNF544-208ENST00000596825 NUP155O75694 1391 aa17.05■□□□□ 0.32
ZNF544-208ENST00000596825 RBM19Q9Y4C8 960 aaKnown RBP17.04■□□□□ 0.32
ZNF544-208ENST00000596825 NPM2Q86SE8 214 aaKnown RBP17.03■□□□□ 0.32
ZNF544-208ENST00000596825 ST20-MTHFSA0A0A6YYL1 179 aa17.03■□□□□ 0.32
ZNF544-208ENST00000596825 DNMBPQ6XZF7 1577 aa17.03■□□□□ 0.32
ZNF544-208ENST00000596825 PRKRIP1Q9H875 184 aaPredicted RBP17■□□□□ 0.31
ZNF544-208ENST00000596825 UACAQ9BZF9 1416 aa17■□□□□ 0.31
ZNF544-208ENST00000596825 FYCO1Q9BQS8 1478 aa17■□□□□ 0.31
ZNF544-208ENST00000596825 TIMELESSQ9UNS1 1208 aa16.99■□□□□ 0.31
ZNF544-208ENST00000596825 CCER2I3L3R5 266 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms