RNA–Protein interactions for RNA: ENST00000596203.1

LINC00664-201, long intergenic non-protein coding RNA 664, humanhuman

TSL 1 (best) BASIC

Gene LINC00664, Length 1,742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00664-201ENST00000596203 CTTNBP2Q8WZ74 1663 aa20.17■□□□□ 0.82
LINC00664-201ENST00000596203 CHD1O14646 1710 aa20.15■□□□□ 0.82
LINC00664-201ENST00000596203 CLIP1P30622 1438 aa20.14■□□□□ 0.81
LINC00664-201ENST00000596203 CEP170Q5SW79 1584 aa20.11■□□□□ 0.81
LINC00664-201ENST00000596203 NUP160Q12769 1436 aa20.08■□□□□ 0.8
LINC00664-201ENST00000596203 KIAA0586Q9BVV6 1533 aa20.07■□□□□ 0.8
LINC00664-201ENST00000596203 IQGAP2Q13576 1575 aa20.07■□□□□ 0.8
LINC00664-201ENST00000596203 P3H3Q8IVL6 736 aa20.02■□□□□ 0.79
LINC00664-201ENST00000596203 ARHGAP35Q9NRY4 1499 aa20.01■□□□□ 0.79
LINC00664-201ENST00000596203 EFCAB5A4FU69 1503 aa19.97■□□□□ 0.79
LINC00664-201ENST00000596203 ARAP1Q96P48 1450 aa19.96■□□□□ 0.79
LINC00664-201ENST00000596203 JPH4Q96JJ6 628 aa19.96■□□□□ 0.79
LINC00664-201ENST00000596203 UGGT2Q9NYU1 1516 aa19.95■□□□□ 0.78
LINC00664-201ENST00000596203 FHOD3Q2V2M9 1422 aa19.93■□□□□ 0.78
LINC00664-201ENST00000596203 SAMD9Q5K651 1589 aa19.92■□□□□ 0.78
LINC00664-201ENST00000596203 OSCARQ8IYS5 282 aa19.92■□□□□ 0.78
LINC00664-201ENST00000596203 CLASP1Q7Z460 1538 aa19.89■□□□□ 0.77
LINC00664-201ENST00000596203 VPS8Q8N3P4 1428 aa19.89■□□□□ 0.77
LINC00664-201ENST00000596203 DISP1Q96F81 1524 aa19.88■□□□□ 0.77
LINC00664-201ENST00000596203 TTBK1Q5TCY1 1321 aaPredicted RBP19.87■□□□□ 0.77
LINC00664-201ENST00000596203 CARMIL2Q6F5E8 1435 aa19.87■□□□□ 0.77
LINC00664-201ENST00000596203 KIAA0556O60303 1618 aa19.86■□□□□ 0.77
LINC00664-201ENST00000596203 PRG4Q92954 1404 aaPredicted RBP19.86■□□□□ 0.77
LINC00664-201ENST00000596203 SHROOM2Q13796 1616 aa19.83■□□□□ 0.76
LINC00664-201ENST00000596203 ATP1B4Q9UN42 357 aaPredicted RBP19.8■□□□□ 0.76
LINC00664-201ENST00000596203 FMN1Q68DA7 1419 aa19.8■□□□□ 0.76
LINC00664-201ENST00000596203 APLP2Q06481 763 aa19.76■□□□□ 0.75
LINC00664-201ENST00000596203 ERCC6L2Q5T890 1561 aa19.76■□□□□ 0.75
LINC00664-201ENST00000596203 PCF11O94913 1555 aaKnown RBP19.75■□□□□ 0.75
LINC00664-201ENST00000596203 PPARGC1BQ86YN6 1023 aaKnown RBP19.73■□□□□ 0.75
LINC00664-201ENST00000596203 CASKIN1Q8WXD9 1431 aa19.71■□□□□ 0.75
LINC00664-201ENST00000596203 PTPRGP23470 1445 aa19.7■□□□□ 0.74
LINC00664-201ENST00000596203 FYCO1Q9BQS8 1478 aa19.7■□□□□ 0.74
LINC00664-201ENST00000596203 PLB1Q6P1J6 1458 aa19.65■□□□□ 0.74
LINC00664-201ENST00000596203 ARID3CA6NKF2 412 aa19.65■□□□□ 0.74
LINC00664-201ENST00000596203 RAPGEF6Q8TEU7 1601 aa19.64■□□□□ 0.73
LINC00664-201ENST00000596203 HECW1Q76N89 1606 aa19.64■□□□□ 0.73
LINC00664-201ENST00000596203 ABCA8O94911 1581 aa19.59■□□□□ 0.73
LINC00664-201ENST00000596203 TIAM1Q13009 1591 aa19.59■□□□□ 0.73
LINC00664-201ENST00000596203 NUP153P49790 1475 aaKnown RBP19.58■□□□□ 0.72
LINC00664-201ENST00000596203 LRRIQ1Q96JM4 1722 aa19.57■□□□□ 0.72
LINC00664-201ENST00000596203 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.57■□□□□ 0.72
LINC00664-201ENST00000596203 HNRNPUL2Q1KMD3 747 aaKnown RBP19.57■□□□□ 0.72
LINC00664-201ENST00000596203 KANK4Q5T7N3 995 aaPredicted RBP19.57■□□□□ 0.72
LINC00664-201ENST00000596203 UACAQ9BZF9 1416 aa19.57■□□□□ 0.72
LINC00664-201ENST00000596203 EPRSP07814 1512 aaKnown RBP19.56■□□□□ 0.72
LINC00664-201ENST00000596203 CCDC18Q5T9S5 1454 aa19.56■□□□□ 0.72
LINC00664-201ENST00000596203 CFAP43Q8NDM7 1665 aa19.56■□□□□ 0.72
LINC00664-201ENST00000596203 ARHGEF11O15085 1522 aa19.56■□□□□ 0.72
LINC00664-201ENST00000596203 MAP3K1Q13233 1512 aa19.56■□□□□ 0.72
LINC00664-201ENST00000596203 CDK13Q14004 1512 aaKnown RBP19.55■□□□□ 0.72
LINC00664-201ENST00000596203 LRRC9Q6ZRR7 1453 aa19.51■□□□□ 0.71
LINC00664-201ENST00000596203 ABCC2Q92887 1545 aa19.5■□□□□ 0.71
LINC00664-201ENST00000596203 MTUS2Q5JR59 1369 aa19.5■□□□□ 0.71
LINC00664-201ENST00000596203 RIMBP3CA6NJZ7 1639 aa19.49■□□□□ 0.71
LINC00664-201ENST00000596203 RIMBP3BA6NNM3 1639 aa19.49■□□□□ 0.71
LINC00664-201ENST00000596203 RIMBP3Q9UFD9 1639 aa19.49■□□□□ 0.71
LINC00664-201ENST00000596203 ATP10BO94823 1461 aa19.47■□□□□ 0.71
LINC00664-201ENST00000596203 CDK11AQ9UQ88 783 aaPredicted RBP19.46■□□□□ 0.71
LINC00664-201ENST00000596203 UHRF1BP1LA0JNW5 1464 aa19.46■□□□□ 0.71
LINC00664-201ENST00000596203 CYB5RLQ6IPT4 315 aa19.44■□□□□ 0.7
LINC00664-201ENST00000596203 ADCY10Q96PN6 1610 aa19.43■□□□□ 0.7
LINC00664-201ENST00000596203 MAGI3Q5TCQ9 1506 aa19.43■□□□□ 0.7
LINC00664-201ENST00000596203 EHBP1L1Q8N3D4 1523 aa19.42■□□□□ 0.7
LINC00664-201ENST00000596203 PLEKHD1A6NEE1 506 aa19.4■□□□□ 0.7
LINC00664-201ENST00000596203 TRIM26Q12899 539 aaPredicted RBP19.39■□□□□ 0.7
LINC00664-201ENST00000596203 ZCCHC11Q5TAX3 1644 aaKnown RBP19.38■□□□□ 0.69
LINC00664-201ENST00000596203 KDM5BQ9UGL1 1544 aa19.38■□□□□ 0.69
LINC00664-201ENST00000596203 NPM1P06748 294 aaKnown RBP eCLIP19.37■□□□□ 0.69
LINC00664-201ENST00000596203 TROQ12816 1431 aaPredicted RBP19.36■□□□□ 0.69
LINC00664-201ENST00000596203 SUPT6HQ7KZ85 1726 aaKnown RBP19.36■□□□□ 0.69
LINC00664-201ENST00000596203 NCOA2Q15596 1464 aa19.34■□□□□ 0.69
LINC00664-201ENST00000596203 PCGF6Q9BYE7 350 aa19.33■□□□□ 0.68
LINC00664-201ENST00000596203 PHLDB1Q86UU1 1377 aa19.33■□□□□ 0.68
LINC00664-201ENST00000596203 KCNH8Q96L42 1107 aa19.29■□□□□ 0.68
LINC00664-201ENST00000596203 KIF14Q15058 1648 aa19.28■□□□□ 0.68
LINC00664-201ENST00000596203 CCNB3Q8WWL7 1395 aa19.25■□□□□ 0.67
LINC00664-201ENST00000596203 ASXL2Q76L83 1435 aa19.24■□□□□ 0.67
LINC00664-201ENST00000596203 MYOM3Q5VTT5 1437 aa19.24■□□□□ 0.67
LINC00664-201ENST00000596203 WDR7Q9Y4E6 1490 aa19.24■□□□□ 0.67
LINC00664-201ENST00000596203 RRBP1Q9P2E9 1410 aaKnown RBP19.22■□□□□ 0.67
LINC00664-201ENST00000596203 FAM50AQ14320 339 aaKnown RBP19.21■□□□□ 0.67
LINC00664-201ENST00000596203 FGD6Q6ZV73 1430 aa19.2■□□□□ 0.66
LINC00664-201ENST00000596203 DNAJC5Q9H3Z4 198 aa19.2■□□□□ 0.66
LINC00664-201ENST00000596203 ABCC10Q5T3U5 1492 aa19.19■□□□□ 0.66
LINC00664-201ENST00000596203 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.17■□□□□ 0.66
LINC00664-201ENST00000596203 GPATCH8Q9UKJ3 1502 aaKnown RBP19.16■□□□□ 0.66
LINC00664-201ENST00000596203 TTC37Q6PGP7 1564 aa19.16■□□□□ 0.66
LINC00664-201ENST00000596203 CFDP1Q9UEE9 299 aaPredicted RBP19.16■□□□□ 0.66
LINC00664-201ENST00000596203 ITSN2Q9NZM3 1697 aa19.15■□□□□ 0.66
LINC00664-201ENST00000596203 ITGAEP38570 1179 aa19.15■□□□□ 0.66
LINC00664-201ENST00000596203 ZNF777Q9ULD5 760 aaPredicted RBP19.14■□□□□ 0.66
LINC00664-201ENST00000596203 MIA2Q96PC5 1412 aa19.14■□□□□ 0.65
LINC00664-201ENST00000596203 MAPKBP1O60336 1514 aa19.14■□□□□ 0.65
LINC00664-201ENST00000596203 PTPN23Q9H3S7 1636 aa19.13■□□□□ 0.65
LINC00664-201ENST00000596203 CDC42BPAQ5VT25 1732 aa19.13■□□□□ 0.65
LINC00664-201ENST00000596203 ZNF644Q9H582 1327 aaPredicted RBP19.1■□□□□ 0.65
LINC00664-201ENST00000596203 MYO5CQ9NQX4 1742 aa19.09■□□□□ 0.65
LINC00664-201ENST00000596203 PREX2Q70Z35 1606 aa19.09■□□□□ 0.65
LINC00664-201ENST00000596203 ARHGAP5Q13017 1502 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms